EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSPAG00000021658 (Gene tree)
Gene ID
103365359
Gene Symbol
pabpn1
Alias
fb19c03|wu:fb17e03|wu:fb18c06|wu:fb19c03|zgc:85979|zgc:92452
Full Name
poly(A) binding protein nuclear 1
Gene Type
protein_coding
Species
Stegastes_partitus
Status
putative
Strand
Plus strand
Length
12941 bases
Position
chrKK580903.1:71514-84454
Accession
103365359
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSPAP00000028779RRM_1PF00076.222.2e-1711
ENSSPAP00000028775RRM_1PF00076.223.4e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSPAT00000029240-1946XM_008292781ENSSPAP00000028775285 (aa)XP_008291003UPI000496B81B
ENSSPAT00000029245-1261XM_008292782ENSSPAP00000028779233 (aa)XP_008291004UPI0004986B1B
Gene Model
Click here to download ENSSPAG00000021658's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000021658's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSPAG00000021658pabpn18255.556ENSSPAG00000017978PABPN1L7553.774
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSPAG00000021658pabpn19972.532ENSG00000258643BCL2L2-PABPN17072.532Homo_sapiens
ENSSPAG00000021658pabpn18682.524ENSG00000100836PABPN19482.143Homo_sapiens
ENSSPAG00000021658pabpn110098.947ENSAPOG00000016425pabpn110098.947Acanthochromis_polyacanthus
ENSSPAG00000021658pabpn18184.211ENSAMEG00000007048BCL2L2-PABPN110084.211Ailuropoda_melanoleuca
ENSSPAG00000021658pabpn110096.864ENSACIG00000021744pabpn110097.740Amphilophus_citrinellus
ENSSPAG00000021658pabpn110098.712ENSAOCG00000015805pabpn110098.712Amphiprion_ocellaris
ENSSPAG00000021658pabpn110098.712ENSAPEG00000009623pabpn110098.712Amphiprion_percula
ENSSPAG00000021658pabpn110098.283ENSATEG00000020531pabpn110098.283Anabas_testudineus
ENSSPAG00000021658pabpn18185.263ENSACAG00000006185-8172.500Anolis_carolinensis
ENSSPAG00000021658pabpn18483.838ENSANAG00000024513-8476.033Aotus_nancymaae
ENSSPAG00000021658pabpn110096.528ENSACLG00000016374pabpn110096.528Astatotilapia_calliptera
ENSSPAG00000021658pabpn110096.567ENSAMXG00000000452pabpn110096.567Astyanax_mexicanus
ENSSPAG00000021658pabpn17485.057ENSBTAG00000050594-7483.333Bos_taurus
ENSSPAG00000021658pabpn18483.838ENSBTAG00000006884PABPN18669.697Bos_taurus
ENSSPAG00000021658pabpn18283.333ENSBTAG00000053753-7183.333Bos_taurus
ENSSPAG00000021658pabpn16158.904WBGene00003904pabp-28655.000Caenorhabditis_elegans
ENSSPAG00000021658pabpn17180.357ENSCJAG00000004407-8480.357Callithrix_jacchus
ENSSPAG00000021658pabpn19975.966ENSCJAG00000007960-8476.395Callithrix_jacchus
ENSSPAG00000021658pabpn18682.524ENSCAFG00000011482PABPN18671.212Canis_familiaris
ENSSPAG00000021658pabpn18682.524ENSCAFG00020006651-8670.833Canis_lupus_dingo
ENSSPAG00000021658pabpn18682.524ENSCAFG00020007298-8670.833Canis_lupus_dingo
ENSSPAG00000021658pabpn18682.524ENSCHIG00000012184PABPN18670.833Capra_hircus
ENSSPAG00000021658pabpn19972.532ENSTSYG00000033996BCL2L2-PABPN19482.143Carlito_syrichta
ENSSPAG00000021658pabpn16082.014ENSCAPG00000009461-9982.014Cavia_aperea
ENSSPAG00000021658pabpn18682.039ENSCPOG00000025574PABPN16881.818Cavia_porcellus
ENSSPAG00000021658pabpn19975.966ENSCCAG00000033954BCL2L2-PABPN18476.395Cebus_capucinus
ENSSPAG00000021658pabpn19975.966ENSCATG00000038536BCL2L2-PABPN18476.395Cercocebus_atys
ENSSPAG00000021658pabpn16582.119ENSCLAG00000012423PABPN15682.119Chinchilla_lanigera
ENSSPAG00000021658pabpn18681.068ENSCSAG00000016036PABPN18669.697Chlorocebus_sabaeus
ENSSPAG00000021658pabpn18972.857ENSCHOG00000004798BCL2L2-PABPN19270.909Choloepus_hoffmanni
ENSSPAG00000021658pabpn17184.524ENSCPBG00000026060-9484.524Chrysemys_picta_bellii
ENSSPAG00000021658pabpn19065.094ENSCING00000012468-8960.000Ciona_intestinalis
ENSSPAG00000021658pabpn17667.039ENSCSAVG00000002001-9359.649Ciona_savignyi
ENSSPAG00000021658pabpn18572.222ENSCANG00000030980-8765.126Colobus_angolensis_palliatus
ENSSPAG00000021658pabpn19972.532ENSCANG00000009750BCL2L2-PABPN19482.143Colobus_angolensis_palliatus
ENSSPAG00000021658pabpn18682.039ENSCGRG00001019696Pabpn19481.548Cricetulus_griseus_chok1gshd
ENSSPAG00000021658pabpn16291.156ENSCGRG00000011102Pabpn19191.156Cricetulus_griseus_crigri
ENSSPAG00000021658pabpn110096.567ENSCSEG00000008774pabpn110096.567Cynoglossus_semilaevis
ENSSPAG00000021658pabpn110093.590ENSCVAG00000003152pabpn110094.043Cyprinodon_variegatus
ENSSPAG00000021658pabpn18153.723ENSDARG00000087996pabpn1l9358.442Danio_rerio
ENSSPAG00000021658pabpn110096.567ENSDARG00000045373pabpn110096.567Danio_rerio
ENSSPAG00000021658pabpn18682.524ENSDNOG00000023682PABPN18670.833Dasypus_novemcinctus
ENSSPAG00000021658pabpn18681.553ENSDORG00000028966-8669.697Dipodomys_ordii
ENSSPAG00000021658pabpn15682.707ENSDORG00000023928-8581.967Dipodomys_ordii
ENSSPAG00000021658pabpn110057.322FBgn0005648Pabp29757.759Drosophila_melanogaster
ENSSPAG00000021658pabpn19972.845ENSEBUG00000002322pabpn19972.845Eptatretus_burgeri
ENSSPAG00000021658pabpn18682.524ENSEASG00005011716PABPN18670.833Equus_asinus_asinus
ENSSPAG00000021658pabpn18581.863ENSECAG00000011652PABPN18570.356Equus_caballus
ENSSPAG00000021658pabpn18679.612ENSEEUG00000012973-6977.833Erinaceus_europaeus
ENSSPAG00000021658pabpn110094.093ENSELUG00000022654pabpn110094.093Esox_lucius
ENSSPAG00000021658pabpn18682.524ENSFCAG00000031922PABPN18670.833Felis_catus
ENSSPAG00000021658pabpn17182.143ENSFDAG00000018381BCL2L2-PABPN19482.143Fukomys_damarensis
ENSSPAG00000021658pabpn110094.850ENSFHEG00000007215pabpn110094.850Fundulus_heteroclitus
ENSSPAG00000021658pabpn110094.386ENSGMOG00000003922pabpn110094.386Gadus_morhua
ENSSPAG00000021658pabpn18385.354ENSGALG00000052930-6182.938Gallus_gallus
ENSSPAG00000021658pabpn110097.021ENSGAFG00000017099pabpn110097.021Gambusia_affinis
ENSSPAG00000021658pabpn110096.842ENSGACG00000002167pabpn110096.842Gasterosteus_aculeatus
ENSSPAG00000021658pabpn19465.812ENSGGOG00000025919-9868.456Gorilla_gorilla
ENSSPAG00000021658pabpn18970.192ENSGGOG00000039675-9166.250Gorilla_gorilla
ENSSPAG00000021658pabpn19975.966ENSGGOG00000022683-8476.395Gorilla_gorilla
ENSSPAG00000021658pabpn110098.283ENSHBUG00000019523pabpn110098.283Haplochromis_burtoni
ENSSPAG00000021658pabpn18769.712ENSHGLG00000018588-7074.603Heterocephalus_glaber_female
ENSSPAG00000021658pabpn17163.690ENSHGLG00000009842-9363.690Heterocephalus_glaber_female
ENSSPAG00000021658pabpn18682.039ENSHGLG00000002927-9291.156Heterocephalus_glaber_female
ENSSPAG00000021658pabpn17172.674ENSHGLG00100018935-9472.674Heterocephalus_glaber_male
ENSSPAG00000021658pabpn18769.712ENSHGLG00100015565-8765.652Heterocephalus_glaber_male
ENSSPAG00000021658pabpn19471.493ENSHGLG00100006673-9291.156Heterocephalus_glaber_male
ENSSPAG00000021658pabpn110096.996ENSHCOG00000004655pabpn110096.996Hippocampus_comes
ENSSPAG00000021658pabpn110096.137ENSIPUG00000008085PABPN110096.137Ictalurus_punctatus
ENSSPAG00000021658pabpn110088.841ENSIPUG00000000180-9988.841Ictalurus_punctatus
ENSSPAG00000021658pabpn17182.143ENSSTOG00000029847BCL2L2-PABPN19482.143Ictidomys_tridecemlineatus
ENSSPAG00000021658pabpn17182.143ENSJJAG00000023507Gm205219482.143Jaculus_jaculus
ENSSPAG00000021658pabpn110097.203ENSKMAG00000018748pabpn110097.203Kryptolebias_marmoratus
ENSSPAG00000021658pabpn110098.283ENSLBEG00000027266pabpn110098.283Labrus_bergylta
ENSSPAG00000021658pabpn17686.592ENSLACG00000000646pabpn18584.103Latimeria_chalumnae
ENSSPAG00000021658pabpn110091.958ENSLOCG00000000796pabpn110092.308Lepisosteus_oculatus
ENSSPAG00000021658pabpn19065.116ENSLOCG00000004694pabpn1l9965.116Lepisosteus_oculatus
ENSSPAG00000021658pabpn16582.781ENSLAFG00000031227-9982.781Loxodonta_africana
ENSSPAG00000021658pabpn19972.532ENSMFAG00000032183BCL2L2-PABPN19482.143Macaca_fascicularis
ENSSPAG00000021658pabpn16175.524ENSMFAG00000031355-9976.056Macaca_fascicularis
ENSSPAG00000021658pabpn18669.268ENSMMUG00000048382-8959.630Macaca_mulatta
ENSSPAG00000021658pabpn19972.532ENSMMUG00000014747BCL2L2-PABPN110082.313Macaca_mulatta
ENSSPAG00000021658pabpn19975.966ENSMNEG00000045065BCL2L2-PABPN18476.395Macaca_nemestrina
ENSSPAG00000021658pabpn17970.053ENSMNEG00000035750-9976.056Macaca_nemestrina
ENSSPAG00000021658pabpn19972.532ENSMLEG00000043862BCL2L2-PABPN19482.143Mandrillus_leucophaeus
ENSSPAG00000021658pabpn17267.665ENSMLEG00000034623-9973.944Mandrillus_leucophaeus
ENSSPAG00000021658pabpn110096.842ENSMAMG00000007979pabpn110096.842Mastacembelus_armatus
ENSSPAG00000021658pabpn110098.246ENSMZEG00005011904pabpn110098.246Maylandia_zebra
ENSSPAG00000021658pabpn19972.532ENSMAUG00000007383Gm205218369.721Mesocricetus_auratus
ENSSPAG00000021658pabpn19976.395ENSMICG00000010002BCL2L2-PABPN18477.119Microcebus_murinus
ENSSPAG00000021658pabpn19972.103ENSMOCG00000018557Gm205219091.156Microtus_ochrogaster
ENSSPAG00000021658pabpn110098.712ENSMMOG00000005405pabpn110098.712Mola_mola
ENSSPAG00000021658pabpn18581.281ENSMODG00000004535-8269.841Monodelphis_domestica
ENSSPAG00000021658pabpn110097.895ENSMALG00000019612pabpn110097.895Monopterus_albus
ENSSPAG00000021658pabpn18681.068MGP_CAROLIEiJ_G0019277Pabpn19090.476Mus_caroli
ENSSPAG00000021658pabpn19971.674MGP_CAROLIEiJ_G0019276Gm205217071.674Mus_caroli
ENSSPAG00000021658pabpn18681.553ENSMUSG00000022194Pabpn19090.476Mus_musculus
ENSSPAG00000021658pabpn19972.103ENSMUSG00000092232Gm205217072.103Mus_musculus
ENSSPAG00000021658pabpn18681.553MGP_PahariEiJ_G0030295Pabpn110095.238Mus_pahari
ENSSPAG00000021658pabpn19972.103MGP_PahariEiJ_G0030294Gm205217072.103Mus_pahari
ENSSPAG00000021658pabpn19972.103MGP_SPRETEiJ_G0020165Gm205217072.103Mus_spretus
ENSSPAG00000021658pabpn18681.553MGP_SPRETEiJ_G0020166Pabpn19090.476Mus_spretus
ENSSPAG00000021658pabpn16682.051ENSMPUG00000006775-9282.051Mustela_putorius_furo
ENSSPAG00000021658pabpn18183.158ENSMLUG00000003800-10083.158Myotis_lucifugus
ENSSPAG00000021658pabpn18879.524ENSMLUG00000012452-8271.032Myotis_lucifugus
ENSSPAG00000021658pabpn18481.313ENSMLUG00000028677-8573.305Myotis_lucifugus
ENSSPAG00000021658pabpn19972.961ENSNGAG00000019529Gm205217072.961Nannospalax_galili
ENSSPAG00000021658pabpn110098.596ENSNBRG00000023955pabpn110098.596Neolamprologus_brichardi
ENSSPAG00000021658pabpn18668.447ENSNLEG00000030598-7766.667Nomascus_leucogenys
ENSSPAG00000021658pabpn16460.403ENSNLEG00000035292-9960.403Nomascus_leucogenys
ENSSPAG00000021658pabpn19972.532ENSNLEG00000015007-7482.297Nomascus_leucogenys
ENSSPAG00000021658pabpn17673.184ENSODEG00000011555-8972.024Octodon_degus
ENSSPAG00000021658pabpn18674.020ENSODEG00000003739-8865.098Octodon_degus
ENSSPAG00000021658pabpn19972.103ENSODEG00000002083BCL2L2-PABPN16881.818Octodon_degus
ENSSPAG00000021658pabpn110098.596ENSONIG00000008112pabpn110098.596Oreochromis_niloticus
ENSSPAG00000021658pabpn16384.354ENSOANG00000009218-10084.354Ornithorhynchus_anatinus
ENSSPAG00000021658pabpn18682.039ENSOCUG00000016174PABPN19570.611Oryctolagus_cuniculus
ENSSPAG00000021658pabpn110097.544ENSORLG00000027900pabpn110097.544Oryzias_latipes
ENSSPAG00000021658pabpn19997.391ENSORLG00020004681pabpn110094.881Oryzias_latipes_hni
ENSSPAG00000021658pabpn110097.854ENSORLG00015000018pabpn110097.854Oryzias_latipes_hsok
ENSSPAG00000021658pabpn110097.544ENSOMEG00000016618pabpn110097.544Oryzias_melastigma
ENSSPAG00000021658pabpn18682.524ENSOGAG00000008710PABPN18670.833Otolemur_garnettii
ENSSPAG00000021658pabpn19972.532ENSOARG00000019336BCL2L2-PABPN16472.532Ovis_aries
ENSSPAG00000021658pabpn19972.532ENSPPAG00000028984BCL2L2-PABPN19282.051Pan_paniscus
ENSSPAG00000021658pabpn17168.072ENSPPAG00000039421-9368.072Pan_paniscus
ENSSPAG00000021658pabpn18682.524ENSPPRG00000010567PABPN18670.833Panthera_pardus
ENSSPAG00000021658pabpn17182.143ENSPTIG00000001063BCL2L2-PABPN19482.143Panthera_tigris_altaica
ENSSPAG00000021658pabpn110063.675ENSPTRG00000047273-9361.111Pan_troglodytes
ENSSPAG00000021658pabpn19975.966ENSPTRG00000006167BCL2L28476.395Pan_troglodytes
ENSSPAG00000021658pabpn18470.707ENSPANG00000023326-9976.761Papio_anubis
ENSSPAG00000021658pabpn19975.966ENSPANG00000021100BCL2L2-PABPN18476.395Papio_anubis
ENSSPAG00000021658pabpn110093.991ENSPKIG00000018052pabpn110093.991Paramormyrops_kingsleyae
ENSSPAG00000021658pabpn16870.625ENSPKIG00000008340pabpn1l8666.298Paramormyrops_kingsleyae
ENSSPAG00000021658pabpn110095.439ENSPKIG00000008144-10095.439Paramormyrops_kingsleyae
ENSSPAG00000021658pabpn110091.930ENSPMGG00000022027pabpn110091.930Periophthalmus_magnuspinnatus
ENSSPAG00000021658pabpn19972.532ENSPEMG00000008332Gm205218991.156Peromyscus_maniculatus_bairdii
ENSSPAG00000021658pabpn17975.806ENSPMAG00000006212pabpn19964.777Petromyzon_marinus
ENSSPAG00000021658pabpn18682.039ENSPCIG00000027751-8670.455Phascolarctos_cinereus
ENSSPAG00000021658pabpn110095.745ENSPFOG00000010351pabpn19995.745Poecilia_formosa
ENSSPAG00000021658pabpn110096.864ENSPLAG00000022696pabpn110096.864Poecilia_latipinna
ENSSPAG00000021658pabpn110095.745ENSPMEG00000020856pabpn110095.745Poecilia_mexicana
ENSSPAG00000021658pabpn110096.516ENSPREG00000011278pabpn110096.516Poecilia_reticulata
ENSSPAG00000021658pabpn18182.474ENSPPYG00000005663PABPN18970.238Pongo_abelii
ENSSPAG00000021658pabpn17969.271ENSPCAG00000005902PABPN18460.000Procavia_capensis
ENSSPAG00000021658pabpn19976.395ENSPCOG00000028047BCL2L2-PABPN18477.119Propithecus_coquereli
ENSSPAG00000021658pabpn18880.861ENSPVAG00000005270PABPN18669.582Pteropus_vampyrus
ENSSPAG00000021658pabpn110098.283ENSPNYG00000013182pabpn110098.283Pundamilia_nyererei
ENSSPAG00000021658pabpn18859.615ENSPNAG00000021666pabpn1l9564.796Pygocentrus_nattereri
ENSSPAG00000021658pabpn110097.425ENSPNAG00000023526pabpn110097.425Pygocentrus_nattereri
ENSSPAG00000021658pabpn18682.039ENSRNOG00000042195Pabpn18570.611Rattus_norvegicus
ENSSPAG00000021658pabpn18972.642ENSRBIG00000039547-8267.411Rhinopithecus_bieti
ENSSPAG00000021658pabpn18871.292ENSRBIG00000042811-9567.401Rhinopithecus_bieti
ENSSPAG00000021658pabpn19471.946ENSRBIG00000040762BCL2L2-PABPN16871.946Rhinopithecus_bieti
ENSSPAG00000021658pabpn19471.946ENSRROG00000045535BCL2L2-PABPN19482.143Rhinopithecus_roxellana
ENSSPAG00000021658pabpn19467.857ENSRROG00000040409-8267.857Rhinopithecus_roxellana
ENSSPAG00000021658pabpn18867.773ENSRROG00000036409-7064.629Rhinopithecus_roxellana
ENSSPAG00000021658pabpn19968.699ENSSBOG00000026930BCL2L2-PABPN19282.051Saimiri_boliviensis_boliviensis
ENSSPAG00000021658pabpn19962.605ENSSHAG00000007707-9959.244Sarcophilus_harrisii
ENSSPAG00000021658pabpn18183.684ENSSHAG00000014841-8783.684Sarcophilus_harrisii
ENSSPAG00000021658pabpn110088.889ENSSFOG00015012565pabpn110088.889Scleropages_formosus
ENSSPAG00000021658pabpn110095.279ENSSFOG00015014718pabpn110095.279Scleropages_formosus
ENSSPAG00000021658pabpn18064.171ENSSFOG00015015833pabpn1l8465.946Scleropages_formosus
ENSSPAG00000021658pabpn110097.895ENSSMAG00000020157pabpn110097.895Scophthalmus_maximus
ENSSPAG00000021658pabpn110098.246ENSSDUG00000020582pabpn110098.246Seriola_dumerili
ENSSPAG00000021658pabpn110098.283ENSSLDG00000007118pabpn110098.283Seriola_lalandi_dorsalis
ENSSPAG00000021658pabpn17183.929ENSSPUG00000018308-9483.929Sphenodon_punctatus
ENSSPAG00000021658pabpn17546.328ENSSSCG00000038472-6667.021Sus_scrofa
ENSSPAG00000021658pabpn19972.532ENSSSCG00000002023PABPN18670.833Sus_scrofa
ENSSPAG00000021658pabpn19263.134ENSSSCG00000034805-7959.242Sus_scrofa
ENSSPAG00000021658pabpn110096.842ENSTRUG00000023664pabpn110096.842Takifugu_rubripes
ENSSPAG00000021658pabpn19291.667ENSTNIG00000005369pabpn19396.040Tetraodon_nigroviridis
ENSSPAG00000021658pabpn18682.524ENSUAMG00000024460PABPN16882.297Ursus_americanus
ENSSPAG00000021658pabpn19972.532ENSUMAG00000014288BCL2L2-PABPN17072.532Ursus_maritimus
ENSSPAG00000021658pabpn19972.532ENSVVUG00000019912BCL2L2-PABPN17682.990Vulpes_vulpes
ENSSPAG00000021658pabpn18484.264ENSXETG00000014597pabpn17382.028Xenopus_tropicalis
ENSSPAG00000021658pabpn17584.091ENSXCOG00000005158pabpn19884.091Xiphophorus_couchianus
ENSSPAG00000021658pabpn110096.596ENSXMAG00000006196pabpn110096.596Xiphophorus_maculatus

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