EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000021660 (Gene tree)
Gene ID: 103363036
Gene Symbol: npm1a
Alias: npm1|sb:cb487
Full Name: nucleophosmin-like
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 8884 bases
Position: chrKK580697.1:261142-270025
Accession: 103363036
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000028784	Nucleoplasmin	PF03066.15	1.8e-33	1	1
ENSSPAP00000028791	Nucleoplasmin	PF03066.15	3e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000029257	-	741	-	ENSSPAP00000028791	246 (aa)	-	-
ENSSPAT00000029250	-	1718	XM_008289617	ENSSPAP00000028784	248 (aa)	XP_008287839	-

Gene Model

Click here to download ENSSPAG00000021660's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000021660's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000021660	npm1a	52	40.299	ENSSPAG00000002553	npm3	81	40.299

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000021660	npm1a	94	87.248	ENSAPOG00000002813	npm1a	100	66.333	Acanthochromis_polyacanthus
ENSSPAG00000021660	npm1a	93	68.231	ENSACIG00000014201	npm1a	100	68.231	Amphilophus_citrinellus
ENSSPAG00000021660	npm1a	87	79.574	ENSAOCG00000004978	npm1a	100	81.702	Amphiprion_ocellaris
ENSSPAG00000021660	npm1a	94	65.646	ENSAPEG00000008594	npm1a	100	64.765	Amphiprion_percula
ENSSPAG00000021660	npm1a	100	68.932	ENSATEG00000008885	npm1a	99	69.608	Anabas_testudineus
ENSSPAG00000021660	npm1a	94	75.686	ENSACLG00000008376	npm1a	94	73.725	Astatotilapia_calliptera
ENSSPAG00000021660	npm1a	98	58.427	ENSAMXG00000010155	npm1a	98	61.742	Astyanax_mexicanus
ENSSPAG00000021660	npm1a	100	76.613	ENSCSEG00000011165	npm1a	100	76.613	Cynoglossus_semilaevis
ENSSPAG00000021660	npm1a	100	55.369	ENSCVAG00000008960	npm1a	100	55.743	Cyprinodon_variegatus
ENSSPAG00000021660	npm1a	91	72.500	ENSDARG00000014329	npm1a	99	53.546	Danio_rerio
ENSSPAG00000021660	npm1a	94	33.700	ENSEBUG00000012753	npm1a	79	33.696	Eptatretus_burgeri
ENSSPAG00000021660	npm1a	100	59.386	ENSELUG00000013705	npm1a	100	57.338	Esox_lucius
ENSSPAG00000021660	npm1a	100	64.238	ENSFHEG00000012496	npm1a	100	64.238	Fundulus_heteroclitus
ENSSPAG00000021660	npm1a	100	59.736	ENSGAFG00000013059	npm1a	100	53.642	Gambusia_affinis
ENSSPAG00000021660	npm1a	98	66.316	ENSGACG00000020319	npm1a	99	66.316	Gasterosteus_aculeatus
ENSSPAG00000021660	npm1a	99	66.456	ENSHBUG00000000776	npm1a	100	66.772	Haplochromis_burtoni
ENSSPAG00000021660	npm1a	100	53.585	ENSHCOG00000001059	npm1a	100	53.585	Hippocampus_comes
ENSSPAG00000021660	npm1a	97	53.242	ENSIPUG00000019452	npm1	99	53.242	Ictalurus_punctatus
ENSSPAG00000021660	npm1a	100	60.269	ENSKMAG00000010709	npm1a	100	63.265	Kryptolebias_marmoratus
ENSSPAG00000021660	npm1a	93	86.885	ENSLBEG00000008793	npm1a	100	57.525	Labrus_bergylta
ENSSPAG00000021660	npm1a	82	47.212	ENSLOCG00000009683	npm1a	100	47.212	Lepisosteus_oculatus
ENSSPAG00000021660	npm1a	94	55.326	ENSMAMG00000009344	npm1a	83	56.949	Mastacembelus_armatus
ENSSPAG00000021660	npm1a	94	77.510	ENSMZEG00005013717	npm1a	94	75.100	Maylandia_zebra
ENSSPAG00000021660	npm1a	94	67.148	ENSMMOG00000007980	npm1a	100	68.953	Mola_mola
ENSSPAG00000021660	npm1a	94	54.392	ENSMALG00000001146	npm1a	100	57.525	Monopterus_albus
ENSSPAG00000021660	npm1a	93	84.286	ENSNBRG00000013172	npm1a	78	84.286	Neolamprologus_brichardi
ENSSPAG00000021660	npm1a	92	60.678	ENSONIG00000001860	npm1a	98	65.886	Oreochromis_niloticus
ENSSPAG00000021660	npm1a	94	54.671	ENSORLG00000010179	npm1a	100	61.775	Oryzias_latipes
ENSSPAG00000021660	npm1a	100	54.452	ENSORLG00020020817	npm1a	100	62.671	Oryzias_latipes_hni
ENSSPAG00000021660	npm1a	94	54.671	ENSORLG00015003439	npm1a	100	62.457	Oryzias_latipes_hsok
ENSSPAG00000021660	npm1a	94	53.448	ENSOMEG00000007083	npm1a	100	54.608	Oryzias_melastigma
ENSSPAG00000021660	npm1a	93	59.184	ENSPKIG00000023943	npm1a	94	53.725	Paramormyrops_kingsleyae
ENSSPAG00000021660	npm1a	100	56.631	ENSPMGG00000011716	npm1a	100	60.573	Periophthalmus_magnuspinnatus
ENSSPAG00000021660	npm1a	100	62.585	ENSPFOG00000019173	npm1a	100	64.286	Poecilia_formosa
ENSSPAG00000021660	npm1a	100	62.207	ENSPLAG00000001093	npm1a	100	62.207	Poecilia_latipinna
ENSSPAG00000021660	npm1a	100	57.860	ENSPMEG00000012523	npm1a	100	57.525	Poecilia_mexicana
ENSSPAG00000021660	npm1a	100	60.000	ENSPREG00000001647	npm1a	100	58.528	Poecilia_reticulata
ENSSPAG00000021660	npm1a	99	68.167	ENSPNYG00000019321	npm1a	100	67.524	Pundamilia_nyererei
ENSSPAG00000021660	npm1a	98	55.172	ENSPNAG00000026891	npm1a	99	55.862	Pygocentrus_nattereri
ENSSPAG00000021660	npm1a	100	56.993	ENSSFOG00015007074	npm1a	100	58.392	Scleropages_formosus
ENSSPAG00000021660	npm1a	100	67.797	ENSSMAG00000019090	npm1a	100	66.441	Scophthalmus_maximus
ENSSPAG00000021660	npm1a	94	58.503	ENSSDUG00000015609	npm1a	100	61.409	Seriola_dumerili
ENSSPAG00000021660	npm1a	94	59.044	ENSSLDG00000017849	npm1a	100	61.953	Seriola_lalandi_dorsalis
ENSSPAG00000021660	npm1a	93	88.525	ENSTRUG00000024003	npm1a	96	57.047	Takifugu_rubripes
ENSSPAG00000021660	npm1a	100	66.096	ENSTNIG00000010773	npm1a	100	64.041	Tetraodon_nigroviridis
ENSSPAG00000021660	npm1a	98	64.552	ENSXCOG00000005958	npm1a	98	65.299	Xiphophorus_couchianus
ENSSPAG00000021660	npm1a	100	56.766	ENSXMAG00000000396	npm1a	100	59.539	Xiphophorus_maculatus