EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000022298 (Gene tree)
Gene ID: -
Gene Symbol: srek1
Alias: zgc:100974
Full Name: splicing regulatory glutamine/lysine-rich protein 1
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 3798 bases
Position: chrKK580137.1:96145-99942
Accession: ZDB-GENE-040801-132
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000029651	RRM_1	PF00076.22	4.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000030133	-	528	-	ENSSPAP00000029651	175 (aa)	-	-

Gene Model

Click here to download ENSSPAG00000022298's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000022298's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000022298	srek1	57	31.731	ENSSPAG00000021582	ncbp2	63	31.731

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000022298	srek1	97	78.531	ENSG00000153914	SREK1	97	64.865	Homo_sapiens
ENSSPAG00000022298	srek1	99	87.432	ENSACIG00000015041	srek1	97	87.432	Amphilophus_citrinellus
ENSSPAG00000022298	srek1	97	78.652	ENSANAG00000031358	SREK1	91	78.652	Aotus_nancymaae
ENSSPAG00000022298	srek1	99	89.326	ENSACLG00000026754	srek1	61	89.326	Astatotilapia_calliptera
ENSSPAG00000022298	srek1	97	78.652	ENSCJAG00000015950	SREK1	91	78.652	Callithrix_jacchus
ENSSPAG00000022298	srek1	95	74.011	ENSCAFG00020019448	-	89	74.011	Canis_lupus_dingo
ENSSPAG00000022298	srek1	97	79.096	ENSTSYG00000036957	SREK1	91	77.348	Carlito_syrichta
ENSSPAG00000022298	srek1	98	77.778	ENSCATG00000031482	SREK1	91	78.652	Cercocebus_atys
ENSSPAG00000022298	srek1	80	83.448	ENSCPBG00000026866	SREK1	53	77.966	Chrysemys_picta_bellii
ENSSPAG00000022298	srek1	98	77.778	ENSCANG00000030421	SREK1	91	78.652	Colobus_angolensis_palliatus
ENSSPAG00000022298	srek1	98	89.655	ENSCVAG00000002411	srek1	86	89.655	Cyprinodon_variegatus
ENSSPAG00000022298	srek1	97	78.652	ENSDORG00000023425	-	91	78.652	Dipodomys_ordii
ENSSPAG00000022298	srek1	97	76.796	ENSEASG00005006829	-	91	76.796	Equus_asinus_asinus
ENSSPAG00000022298	srek1	97	76.796	ENSECAG00000036994	-	91	76.796	Equus_caballus
ENSSPAG00000022298	srek1	55	81.373	ENSGALG00000043541	SREK1	53	74.627	Gallus_gallus
ENSSPAG00000022298	srek1	97	78.652	ENSGGOG00000004737	SREK1	91	78.652	Gorilla_gorilla
ENSSPAG00000022298	srek1	99	89.326	ENSHBUG00000007057	srek1	97	89.326	Haplochromis_burtoni
ENSSPAG00000022298	srek1	99	84.659	ENSHCOG00000017240	SREK1	53	84.659	Hippocampus_comes
ENSSPAG00000022298	srek1	97	78.652	ENSJJAG00000000214	-	91	78.652	Jaculus_jaculus
ENSSPAG00000022298	srek1	99	89.205	ENSLBEG00000022980	srek1	91	89.205	Labrus_bergylta
ENSSPAG00000022298	srek1	98	77.778	ENSMFAG00000039823	SREK1	91	78.652	Macaca_fascicularis
ENSSPAG00000022298	srek1	98	77.778	ENSMNEG00000030723	SREK1	91	78.652	Macaca_nemestrina
ENSSPAG00000022298	srek1	98	77.778	ENSMLEG00000039078	SREK1	91	78.652	Mandrillus_leucophaeus
ENSSPAG00000022298	srek1	99	89.326	ENSMZEG00005005719	srek1	97	89.326	Maylandia_zebra
ENSSPAG00000022298	srek1	73	75.781	ENSMGAG00000002047	SREK1	68	68.000	Meleagris_gallopavo
ENSSPAG00000022298	srek1	97	70.899	ENSMAUG00000010066	-	57	76.111	Mesocricetus_auratus
ENSSPAG00000022298	srek1	97	78.652	ENSMICG00000034959	SREK1	91	78.652	Microcebus_murinus
ENSSPAG00000022298	srek1	97	76.111	ENSMOCG00000001536	-	56	76.111	Microtus_ochrogaster
ENSSPAG00000022298	srek1	99	92.045	ENSMMOG00000008409	srek1	92	92.045	Mola_mola
ENSSPAG00000022298	srek1	97	75.691	ENSNGAG00000017527	-	91	76.243	Nannospalax_galili
ENSSPAG00000022298	srek1	99	89.444	ENSNBRG00000010718	srek1	97	89.444	Neolamprologus_brichardi
ENSSPAG00000022298	srek1	99	93.714	ENSONIG00000011080	srek1	50	92.655	Oreochromis_niloticus
ENSSPAG00000022298	srek1	99	87.978	ENSORLG00015020471	srek1	94	87.978	Oryzias_latipes_hsok
ENSSPAG00000022298	srek1	97	78.652	ENSPPAG00000031605	SREK1	91	78.652	Pan_paniscus
ENSSPAG00000022298	srek1	97	78.652	ENSPTRG00000016936	SREK1	91	78.652	Pan_troglodytes
ENSSPAG00000022298	srek1	98	77.778	ENSPANG00000008953	SREK1	91	78.652	Papio_anubis
ENSSPAG00000022298	srek1	98	84.483	ENSPMGG00000017031	srek1	98	84.483	Periophthalmus_magnuspinnatus
ENSSPAG00000022298	srek1	97	76.111	ENSPEMG00000024051	-	58	76.111	Peromyscus_maniculatus_bairdii
ENSSPAG00000022298	srek1	97	78.652	ENSPCIG00000017750	-	91	78.652	Phascolarctos_cinereus
ENSSPAG00000022298	srek1	98	94.253	ENSPLAG00000008827	srek1	99	94.253	Poecilia_latipinna
ENSSPAG00000022298	srek1	95	94.048	ENSPREG00000019912	srek1	98	94.048	Poecilia_reticulata
ENSSPAG00000022298	srek1	97	78.652	ENSPCOG00000026230	SREK1	91	78.652	Propithecus_coquereli
ENSSPAG00000022298	srek1	97	78.531	ENSRBIG00000033818	SREK1	92	75.956	Rhinopithecus_bieti
ENSSPAG00000022298	srek1	98	77.778	ENSRROG00000017210	SREK1	91	78.652	Rhinopithecus_roxellana
ENSSPAG00000022298	srek1	97	78.652	ENSSBOG00000031230	SREK1	91	78.652	Saimiri_boliviensis_boliviensis
ENSSPAG00000022298	srek1	97	78.090	ENSSPUG00000016553	SREK1	57	78.090	Sphenodon_punctatus
ENSSPAG00000022298	srek1	99	84.971	ENSTRUG00000002960	srek1	97	84.971	Takifugu_rubripes
ENSSPAG00000022298	srek1	97	78.652	ENSUAMG00000022661	-	91	78.652	Ursus_americanus
ENSSPAG00000022298	srek1	81	84.247	ENSVVUG00000005890	-	74	84.247	Vulpes_vulpes
ENSSPAG00000022298	srek1	98	89.266	ENSXCOG00000017793	srek1	97	89.266	Xiphophorus_couchianus