EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000022369 (Gene tree)
Gene ID: 103357110
Gene Symbol: polr1c
Alias: zgc:65973
Full Name: RNA polymerase I and III subunit C
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 12496 bases
Position: chrKK580306.1:408301-420796
Accession: 103357110
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000029738	RNA_pol_A_bac	PF01000.26	1.8e-31	1	1
ENSSPAP00000029738	RNA_pol_L	PF01193.24	1.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000030221	-	1472	XM_008281515	ENSSPAP00000029738	351 (aa)	XP_008279737	UPI000497A04E

Gene Model

Click here to download ENSSPAG00000022369's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000022369's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000022369	polr1c	100	72.365	ENSG00000171453	POLR1C	100	73.559	Homo_sapiens
ENSSPAG00000022369	polr1c	100	94.017	ENSAPOG00000024356	polr1c	100	94.017	Acanthochromis_polyacanthus
ENSSPAG00000022369	polr1c	99	72.493	ENSAMEG00000012205	POLR1C	99	72.206	Ailuropoda_melanoleuca
ENSSPAG00000022369	polr1c	94	79.456	ENSACIG00000016268	polr1c	91	79.456	Amphilophus_citrinellus
ENSSPAG00000022369	polr1c	100	94.017	ENSAOCG00000011687	polr1c	97	94.017	Amphiprion_ocellaris
ENSSPAG00000022369	polr1c	100	94.872	ENSAPEG00000002433	polr1c	100	94.872	Amphiprion_percula
ENSSPAG00000022369	polr1c	99	90.544	ENSATEG00000005985	polr1c	99	90.544	Anabas_testudineus
ENSSPAG00000022369	polr1c	83	74.828	ENSAPLG00000002908	POLR1C	100	71.711	Anas_platyrhynchos
ENSSPAG00000022369	polr1c	89	71.565	ENSACAG00000009764	POLR1C	88	71.246	Anolis_carolinensis
ENSSPAG00000022369	polr1c	100	72.365	ENSANAG00000025805	POLR1C	99	72.080	Aotus_nancymaae
ENSSPAG00000022369	polr1c	100	90.028	ENSACLG00000006573	polr1c	100	90.028	Astatotilapia_calliptera
ENSSPAG00000022369	polr1c	100	81.481	ENSAMXG00000012062	polr1c	99	80.912	Astyanax_mexicanus
ENSSPAG00000022369	polr1c	99	73.066	ENSBTAG00000018969	POLR1C	99	72.779	Bos_taurus
ENSSPAG00000022369	polr1c	92	46.746	WBGene00019275	rpac-40	92	46.154	Caenorhabditis_elegans
ENSSPAG00000022369	polr1c	100	71.795	ENSCJAG00000005594	POLR1C	100	71.510	Callithrix_jacchus
ENSSPAG00000022369	polr1c	99	72.493	ENSCAFG00000001872	POLR1C	99	72.206	Canis_familiaris
ENSSPAG00000022369	polr1c	62	30.088	ENSCAFG00020007660	POLR2C	62	30.088	Canis_lupus_dingo
ENSSPAG00000022369	polr1c	99	72.493	ENSCAFG00020012018	POLR1C	99	72.206	Canis_lupus_dingo
ENSSPAG00000022369	polr1c	99	73.066	ENSCHIG00000004352	POLR1C	99	72.493	Capra_hircus
ENSSPAG00000022369	polr1c	99	72.493	ENSTSYG00000011921	POLR1C	99	72.206	Carlito_syrichta
ENSSPAG00000022369	polr1c	86	73.841	ENSCAPG00000015364	POLR1C	87	73.510	Cavia_aperea
ENSSPAG00000022369	polr1c	100	72.934	ENSCPOG00000038098	POLR1C	100	72.650	Cavia_porcellus
ENSSPAG00000022369	polr1c	99	71.920	ENSCCAG00000020169	POLR1C	99	71.633	Cebus_capucinus
ENSSPAG00000022369	polr1c	100	72.365	ENSCATG00000044045	POLR1C	100	72.080	Cercocebus_atys
ENSSPAG00000022369	polr1c	62	30.088	ENSCLAG00000013676	POLR2C	54	30.088	Chinchilla_lanigera
ENSSPAG00000022369	polr1c	100	73.219	ENSCLAG00000009266	POLR1C	100	72.934	Chinchilla_lanigera
ENSSPAG00000022369	polr1c	100	71.510	ENSCSAG00000011913	POLR1C	100	71.225	Chlorocebus_sabaeus
ENSSPAG00000022369	polr1c	60	69.340	ENSCHOG00000006601	POLR1C	100	69.340	Choloepus_hoffmanni
ENSSPAG00000022369	polr1c	99	73.926	ENSCPBG00000025203	POLR1C	99	73.639	Chrysemys_picta_bellii
ENSSPAG00000022369	polr1c	99	53.582	ENSCING00000003563	-	99	53.582	Ciona_intestinalis
ENSSPAG00000022369	polr1c	100	72.365	ENSCANG00000043167	POLR1C	100	72.080	Colobus_angolensis_palliatus
ENSSPAG00000022369	polr1c	99	71.633	ENSCGRG00001017533	Polr1c	99	71.060	Cricetulus_griseus_chok1gshd
ENSSPAG00000022369	polr1c	86	72.517	ENSCGRG00000013225	Polr1c	99	71.854	Cricetulus_griseus_crigri
ENSSPAG00000022369	polr1c	100	84.615	ENSCSEG00000018097	polr1c	100	84.046	Cynoglossus_semilaevis
ENSSPAG00000022369	polr1c	60	91.038	ENSCVAG00000005684	polr1c	85	91.038	Cyprinodon_variegatus
ENSSPAG00000022369	polr1c	100	79.487	ENSDARG00000039400	polr1c	96	78.632	Danio_rerio
ENSSPAG00000022369	polr1c	100	72.365	ENSDNOG00000042693	POLR1C	100	72.080	Dasypus_novemcinctus
ENSSPAG00000022369	polr1c	99	72.493	ENSDORG00000000429	Polr1c	99	72.206	Dipodomys_ordii
ENSSPAG00000022369	polr1c	90	52.681	FBgn0031657	CG3756	93	51.420	Drosophila_melanogaster
ENSSPAG00000022369	polr1c	99	69.341	ENSETEG00000010807	POLR1C	99	69.341	Echinops_telfairi
ENSSPAG00000022369	polr1c	98	67.442	ENSEBUG00000013725	polr1c	98	67.151	Eptatretus_burgeri
ENSSPAG00000022369	polr1c	99	72.206	ENSEASG00005003338	POLR1C	99	71.920	Equus_asinus_asinus
ENSSPAG00000022369	polr1c	99	72.206	ENSECAG00000023516	POLR1C	98	71.920	Equus_caballus
ENSSPAG00000022369	polr1c	99	72.779	ENSEEUG00000005471	POLR1C	99	72.493	Erinaceus_europaeus
ENSSPAG00000022369	polr1c	100	80.912	ENSELUG00000013027	polr1c	100	80.342	Esox_lucius
ENSSPAG00000022369	polr1c	99	73.639	ENSFCAG00000009735	POLR1C	99	73.352	Felis_catus
ENSSPAG00000022369	polr1c	93	71.865	ENSFALG00000012111	POLR1C	100	71.560	Ficedula_albicollis
ENSSPAG00000022369	polr1c	99	72.493	ENSFDAG00000008428	POLR1C	99	72.206	Fukomys_damarensis
ENSSPAG00000022369	polr1c	100	73.789	ENSFHEG00000000262	polr1c	100	74.359	Fundulus_heteroclitus
ENSSPAG00000022369	polr1c	50	85.227	ENSFHEG00000013867	-	84	86.628	Fundulus_heteroclitus
ENSSPAG00000022369	polr1c	93	80.488	ENSGMOG00000013878	polr1c	100	80.183	Gadus_morhua
ENSSPAG00000022369	polr1c	99	71.920	ENSGALG00000010349	POLR1C	99	71.633	Gallus_gallus
ENSSPAG00000022369	polr1c	100	87.749	ENSGAFG00000010153	polr1c	100	87.749	Gambusia_affinis
ENSSPAG00000022369	polr1c	100	86.610	ENSGACG00000002453	polr1c	100	86.610	Gasterosteus_aculeatus
ENSSPAG00000022369	polr1c	98	73.623	ENSGAGG00000010640	POLR1C	99	73.333	Gopherus_agassizii
ENSSPAG00000022369	polr1c	100	72.365	ENSGGOG00000010903	POLR1C	100	72.080	Gorilla_gorilla
ENSSPAG00000022369	polr1c	100	80.912	ENSHBUG00000017816	polr1c	100	80.057	Haplochromis_burtoni
ENSSPAG00000022369	polr1c	99	71.920	ENSHGLG00000019441	POLR1C	100	71.212	Heterocephalus_glaber_female
ENSSPAG00000022369	polr1c	99	72.206	ENSHGLG00100005970	POLR1C	100	71.212	Heterocephalus_glaber_male
ENSSPAG00000022369	polr1c	99	81.948	ENSHCOG00000002179	polr1c	99	81.948	Hippocampus_comes
ENSSPAG00000022369	polr1c	99	80.802	ENSIPUG00000024464	polr1c	99	80.229	Ictalurus_punctatus
ENSSPAG00000022369	polr1c	99	72.493	ENSSTOG00000010631	POLR1C	99	72.206	Ictidomys_tridecemlineatus
ENSSPAG00000022369	polr1c	99	73.066	ENSJJAG00000023110	Polr1c	99	72.779	Jaculus_jaculus
ENSSPAG00000022369	polr1c	100	87.749	ENSKMAG00000014305	polr1c	97	87.749	Kryptolebias_marmoratus
ENSSPAG00000022369	polr1c	100	90.883	ENSLBEG00000014925	polr1c	100	90.883	Labrus_bergylta
ENSSPAG00000022369	polr1c	95	58.929	ENSLACG00000012567	POLR1C	98	58.333	Latimeria_chalumnae
ENSSPAG00000022369	polr1c	100	79.202	ENSLOCG00000016710	polr1c	96	78.632	Lepisosteus_oculatus
ENSSPAG00000022369	polr1c	87	73.443	ENSLAFG00000026248	POLR1C	100	73.443	Loxodonta_africana
ENSSPAG00000022369	polr1c	100	72.080	ENSMFAG00000046295	POLR1C	100	71.795	Macaca_fascicularis
ENSSPAG00000022369	polr1c	100	72.080	ENSMMUG00000015192	POLR1C	100	71.795	Macaca_mulatta
ENSSPAG00000022369	polr1c	100	72.080	ENSMNEG00000028073	POLR1C	100	71.795	Macaca_nemestrina
ENSSPAG00000022369	polr1c	100	72.080	ENSMLEG00000034818	POLR1C	100	71.795	Mandrillus_leucophaeus
ENSSPAG00000022369	polr1c	100	89.744	ENSMAMG00000008700	polr1c	100	89.744	Mastacembelus_armatus
ENSSPAG00000022369	polr1c	100	89.744	ENSMZEG00005018545	polr1c	100	89.744	Maylandia_zebra
ENSSPAG00000022369	polr1c	84	69.831	ENSMGAG00000011020	POLR1C	100	69.492	Meleagris_gallopavo
ENSSPAG00000022369	polr1c	99	72.206	ENSMAUG00000014329	Polr1c	99	71.920	Mesocricetus_auratus
ENSSPAG00000022369	polr1c	99	70.774	ENSMICG00000005027	POLR1C	99	71.061	Microcebus_murinus
ENSSPAG00000022369	polr1c	99	72.493	ENSMOCG00000017549	Polr1c	99	72.206	Microtus_ochrogaster
ENSSPAG00000022369	polr1c	100	71.225	ENSMMOG00000005380	polr1c	100	71.795	Mola_mola
ENSSPAG00000022369	polr1c	84	74.576	ENSMODG00000018964	POLR1C	100	74.237	Monodelphis_domestica
ENSSPAG00000022369	polr1c	100	74.929	ENSMALG00000011711	polr1c	100	75.214	Monopterus_albus
ENSSPAG00000022369	polr1c	99	64.470	MGP_CAROLIEiJ_G0021662	Polr1c	100	71.591	Mus_caroli
ENSSPAG00000022369	polr1c	99	72.493	ENSMUSG00000067148	Polr1c	100	72.348	Mus_musculus
ENSSPAG00000022369	polr1c	99	73.352	MGP_PahariEiJ_G0020654	Polr1c	100	73.106	Mus_pahari
ENSSPAG00000022369	polr1c	99	72.493	MGP_SPRETEiJ_G0022574	Polr1c	100	72.348	Mus_spretus
ENSSPAG00000022369	polr1c	99	73.066	ENSMPUG00000012916	POLR1C	91	72.779	Mustela_putorius_furo
ENSSPAG00000022369	polr1c	99	72.493	ENSMLUG00000017751	POLR1C	99	72.206	Myotis_lucifugus
ENSSPAG00000022369	polr1c	99	72.206	ENSNGAG00000023487	Polr1c	100	73.898	Nannospalax_galili
ENSSPAG00000022369	polr1c	100	90.028	ENSNBRG00000018742	polr1c	100	90.028	Neolamprologus_brichardi
ENSSPAG00000022369	polr1c	100	72.080	ENSNLEG00000004035	POLR1C	100	71.795	Nomascus_leucogenys
ENSSPAG00000022369	polr1c	100	62.678	ENSMEUG00000006778	POLR1C	100	62.393	Notamacropus_eugenii
ENSSPAG00000022369	polr1c	77	70.849	ENSOPRG00000000145	POLR1C	99	70.480	Ochotona_princeps
ENSSPAG00000022369	polr1c	100	72.365	ENSODEG00000015831	-	100	72.080	Octodon_degus
ENSSPAG00000022369	polr1c	62	69.406	ENSODEG00000017109	-	97	69.811	Octodon_degus
ENSSPAG00000022369	polr1c	100	90.313	ENSONIG00000013133	polr1c	98	90.313	Oreochromis_niloticus
ENSSPAG00000022369	polr1c	99	70.487	ENSOANG00000003043	POLR1C	99	70.201	Ornithorhynchus_anatinus
ENSSPAG00000022369	polr1c	99	71.060	ENSOCUG00000005504	POLR1C	99	70.774	Oryctolagus_cuniculus
ENSSPAG00000022369	polr1c	99	83.333	ENSORLG00000019743	polr1c	99	83.333	Oryzias_latipes
ENSSPAG00000022369	polr1c	99	84.195	ENSORLG00020006489	POLR1C	99	84.195	Oryzias_latipes_hni
ENSSPAG00000022369	polr1c	76	66.423	ENSORLG00020005555	polr1c	81	65.942	Oryzias_latipes_hni
ENSSPAG00000022369	polr1c	99	83.333	ENSORLG00015013322	polr1c	100	82.621	Oryzias_latipes_hsok
ENSSPAG00000022369	polr1c	98	85.217	ENSOMEG00000016527	polr1c	98	85.217	Oryzias_melastigma
ENSSPAG00000022369	polr1c	99	71.060	ENSOGAG00000016318	POLR1C	99	70.487	Otolemur_garnettii
ENSSPAG00000022369	polr1c	99	72.779	ENSOARG00000007503	POLR1C	99	72.493	Ovis_aries
ENSSPAG00000022369	polr1c	100	72.365	ENSPPAG00000043678	POLR1C	100	72.080	Pan_paniscus
ENSSPAG00000022369	polr1c	99	73.639	ENSPPRG00000009760	POLR1C	99	73.352	Panthera_pardus
ENSSPAG00000022369	polr1c	99	73.639	ENSPTIG00000014813	POLR1C	99	73.352	Panthera_tigris_altaica
ENSSPAG00000022369	polr1c	100	72.365	ENSPTRG00000018202	POLR1C	100	72.080	Pan_troglodytes
ENSSPAG00000022369	polr1c	100	72.365	ENSPANG00000009025	POLR1C	99	72.080	Papio_anubis
ENSSPAG00000022369	polr1c	100	81.766	ENSPKIG00000009858	polr1c	100	81.197	Paramormyrops_kingsleyae
ENSSPAG00000022369	polr1c	99	73.066	ENSPSIG00000012580	POLR1C	94	73.066	Pelodiscus_sinensis
ENSSPAG00000022369	polr1c	100	71.225	ENSPMGG00000012121	polr1c	100	71.510	Periophthalmus_magnuspinnatus
ENSSPAG00000022369	polr1c	99	72.779	ENSPEMG00000006970	Polr1c	99	72.206	Peromyscus_maniculatus_bairdii
ENSSPAG00000022369	polr1c	99	69.886	ENSPMAG00000005560	polr1c	99	69.318	Petromyzon_marinus
ENSSPAG00000022369	polr1c	62	31.390	ENSPMAG00000004827	polr2c	91	31.390	Petromyzon_marinus
ENSSPAG00000022369	polr1c	100	73.219	ENSPCIG00000028137	POLR1C	98	72.934	Phascolarctos_cinereus
ENSSPAG00000022369	polr1c	100	88.319	ENSPFOG00000014342	POLR1C	100	88.319	Poecilia_formosa
ENSSPAG00000022369	polr1c	100	88.319	ENSPFOG00000014357	polr1c	98	88.319	Poecilia_formosa
ENSSPAG00000022369	polr1c	60	88.679	ENSPLAG00000004111	polr1c	88	88.679	Poecilia_latipinna
ENSSPAG00000022369	polr1c	100	88.319	ENSPMEG00000011877	-	100	88.319	Poecilia_mexicana
ENSSPAG00000022369	polr1c	100	88.319	ENSPMEG00000008420	polr1c	100	88.319	Poecilia_mexicana
ENSSPAG00000022369	polr1c	100	87.179	ENSPREG00000007985	polr1c	100	87.179	Poecilia_reticulata
ENSSPAG00000022369	polr1c	100	72.080	ENSPPYG00000016645	POLR1C	100	71.795	Pongo_abelii
ENSSPAG00000022369	polr1c	99	70.774	ENSPCOG00000024628	POLR1C	99	70.487	Propithecus_coquereli
ENSSPAG00000022369	polr1c	99	67.335	ENSPVAG00000005689	POLR1C	99	67.335	Pteropus_vampyrus
ENSSPAG00000022369	polr1c	100	89.744	ENSPNYG00000003620	polr1c	100	89.744	Pundamilia_nyererei
ENSSPAG00000022369	polr1c	100	80.912	ENSPNAG00000008443	polr1c	100	80.342	Pygocentrus_nattereri
ENSSPAG00000022369	polr1c	99	72.493	ENSRNOG00000019079	Polr1c	99	71.920	Rattus_norvegicus
ENSSPAG00000022369	polr1c	100	72.080	ENSRBIG00000007155	POLR1C	100	71.795	Rhinopithecus_bieti
ENSSPAG00000022369	polr1c	100	72.365	ENSRROG00000000257	POLR1C	100	72.080	Rhinopithecus_roxellana
ENSSPAG00000022369	polr1c	54	30.808	YIL021W	RPB3	55	30.808	Saccharomyces_cerevisiae
ENSSPAG00000022369	polr1c	92	48.137	YPR110C	RPC40	95	48.137	Saccharomyces_cerevisiae
ENSSPAG00000022369	polr1c	99	71.920	ENSSBOG00000025735	POLR1C	99	71.935	Saimiri_boliviensis_boliviensis
ENSSPAG00000022369	polr1c	100	66.667	ENSSHAG00000014456	POLR1C	100	66.382	Sarcophilus_harrisii
ENSSPAG00000022369	polr1c	100	82.336	ENSSFOG00015019860	polr1c	100	81.766	Scleropages_formosus
ENSSPAG00000022369	polr1c	100	87.464	ENSSMAG00000018865	polr1c	100	86.325	Scophthalmus_maximus
ENSSPAG00000022369	polr1c	100	91.738	ENSSDUG00000015745	polr1c	91	91.738	Seriola_dumerili
ENSSPAG00000022369	polr1c	100	91.453	ENSSLDG00000018285	polr1c	91	91.453	Seriola_lalandi_dorsalis
ENSSPAG00000022369	polr1c	99	71.387	ENSSPUG00000011822	POLR1C	99	71.014	Sphenodon_punctatus
ENSSPAG00000022369	polr1c	99	71.920	ENSSSCG00000028007	POLR1C	98	71.633	Sus_scrofa
ENSSPAG00000022369	polr1c	96	72.619	ENSTGUG00000009159	POLR1C	99	72.321	Taeniopygia_guttata
ENSSPAG00000022369	polr1c	100	85.470	ENSTRUG00000006264	polr1c	100	85.470	Takifugu_rubripes
ENSSPAG00000022369	polr1c	51	73.034	ENSTBEG00000002254	POLR1C	100	73.034	Tupaia_belangeri
ENSSPAG00000022369	polr1c	76	71.536	ENSTTRG00000006344	POLR1C	76	71.161	Tursiops_truncatus
ENSSPAG00000022369	polr1c	99	73.066	ENSUAMG00000025602	POLR1C	99	72.779	Ursus_americanus
ENSSPAG00000022369	polr1c	99	73.066	ENSUMAG00000005938	POLR1C	99	72.779	Ursus_maritimus
ENSSPAG00000022369	polr1c	99	70.201	ENSVVUG00000028922	POLR1C	99	69.914	Vulpes_vulpes
ENSSPAG00000022369	polr1c	99	68.571	ENSXETG00000010882	polr1c	99	68.000	Xenopus_tropicalis
ENSSPAG00000022369	polr1c	100	87.179	ENSXCOG00000014185	polr1c	100	86.325	Xiphophorus_couchianus
ENSSPAG00000022369	polr1c	100	87.749	ENSXMAG00000015076	polr1c	100	87.749	Xiphophorus_maculatus