EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000022440 (Gene tree)
Gene ID: 103356524
Gene Symbol: -
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 12333 bases
Position: chrKK580278.1:368494-380826
Accession: 103356524
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000029833	MMR_HSR1	PF01926.23	6.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000030317	-	4920	XM_008280694	ENSSPAP00000029833	200 (aa)	XP_008278916	UPI0004969D9F

Gene Model

Click here to download ENSSPAG00000022440's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000022440's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000022440	-	84	39.884	ENSSPAG00000011224	-	79	39.884
ENSSPAG00000022440	-	86	45.665	ENSSPAG00000010771	RAB39B	81	45.665
ENSSPAG00000022440	-	95	39.196	ENSSPAG00000006404	zgc:101559	84	39.196
ENSSPAG00000022440	-	90	39.086	ENSSPAG00000004801	rab33ba	82	39.086
ENSSPAG00000022440	-	79	44.937	ENSSPAG00000001067	-	76	44.937
ENSSPAG00000022440	-	84	44.311	ENSSPAG00000022927	rab14	78	44.311
ENSSPAG00000022440	-	77	36.364	ENSSPAG00000012674	rhebl1	83	36.364
ENSSPAG00000022440	-	86	53.216	ENSSPAG00000008400	rab35b	100	47.525
ENSSPAG00000022440	-	83	33.136	ENSSPAG00000011401	-	78	33.136
ENSSPAG00000022440	-	96	35.417	ENSSPAG00000007357	hrasb	98	35.417
ENSSPAG00000022440	-	79	44.304	ENSSPAG00000015817	rab25a	75	44.304
ENSSPAG00000022440	-	79	42.405	ENSSPAG00000006001	rab41	75	42.405
ENSSPAG00000022440	-	81	42.857	ENSSPAG00000006436	rab5c	78	41.618
ENSSPAG00000022440	-	98	54.500	ENSSPAG00000012564	-	98	54.500
ENSSPAG00000022440	-	96	36.410	ENSSPAG00000004878	rras	96	36.410
ENSSPAG00000022440	-	75	33.758	ENSSPAG00000014922	rasl11b	79	30.653
ENSSPAG00000022440	-	96	42.786	ENSSPAG00000012044	rab11al	93	42.786
ENSSPAG00000022440	-	95	41.500	ENSSPAG00000010224	-	88	41.500
ENSSPAG00000022440	-	94	41.837	ENSSPAG00000005785	rab33a	86	41.837
ENSSPAG00000022440	-	99	35.749	ENSSPAG00000001423	-	100	35.749
ENSSPAG00000022440	-	79	40.625	ENSSPAG00000017348	rab34a	60	40.625
ENSSPAG00000022440	-	58	30.769	ENSSPAG00000009787	arl3	65	30.769
ENSSPAG00000022440	-	88	56.250	ENSSPAG00000015211	rab15	82	56.250
ENSSPAG00000022440	-	97	38.942	ENSSPAG00000005141	-	97	38.942
ENSSPAG00000022440	-	87	45.665	ENSSPAG00000017313	rab11ba	79	45.665
ENSSPAG00000022440	-	80	49.686	ENSSPAG00000014559	-	73	49.686
ENSSPAG00000022440	-	90	32.973	ENSSPAG00000015015	rras2	94	33.503
ENSSPAG00000022440	-	81	32.370	ENSSPAG00000023440	rasl11a	67	32.370
ENSSPAG00000022440	-	86	58.140	ENSSPAG00000013533	zgc:171927	80	58.140
ENSSPAG00000022440	-	84	42.012	ENSSPAG00000016167	rab42a	78	42.012
ENSSPAG00000022440	-	86	44.186	ENSSPAG00000012060	rab25b	83	43.529
ENSSPAG00000022440	-	80	49.686	ENSSPAG00000011419	rab11bb	73	49.686
ENSSPAG00000022440	-	85	49.412	ENSSPAG00000006302	si:dkey-16l2.16	87	47.253
ENSSPAG00000022440	-	86	48.538	ENSSPAG00000013422	rab30	84	48.538
ENSSPAG00000022440	-	79	44.304	ENSSPAG00000017366	rab6ba	76	44.304
ENSSPAG00000022440	-	97	52.525	ENSSPAG00000022676	rab1ba	98	52.525
ENSSPAG00000022440	-	88	38.889	ENSSPAG00000009806	rab9b	81	38.889
ENSSPAG00000022440	-	79	40.625	ENSSPAG00000018203	rab36	62	40.625
ENSSPAG00000022440	-	96	36.082	ENSSPAG00000009928	kras	98	35.233
ENSSPAG00000022440	-	91	56.354	ENSSPAG00000015564	rab1ab	79	56.354
ENSSPAG00000022440	-	86	50.581	ENSSPAG00000010822	rab12	71	50.581
ENSSPAG00000022440	-	85	45.930	ENSSPAG00000010919	-	81	45.930
ENSSPAG00000022440	-	83	30.178	ENSSPAG00000021839	rasd4	78	30.178
ENSSPAG00000022440	-	79	40.625	ENSSPAG00000002801	rab34b	63	40.625
ENSSPAG00000022440	-	80	40.994	ENSSPAG00000022624	-	71	40.994
ENSSPAG00000022440	-	84	43.275	ENSSPAG00000012955	si:dkey-34d22.5	77	43.275
ENSSPAG00000022440	-	87	42.775	ENSSPAG00000009276	rab6bb	91	42.775
ENSSPAG00000022440	-	80	49.686	ENSSPAG00000019393	RAB11A	78	49.686
ENSSPAG00000022440	-	63	31.496	ENSSPAG00000017484	-	71	31.707
ENSSPAG00000022440	-	88	36.723	ENSSPAG00000010373	rab23	90	36.508
ENSSPAG00000022440	-	95	40.104	ENSSPAG00000015678	rab5aa	89	40.104
ENSSPAG00000022440	-	88	54.286	ENSSPAG00000023185	RAB15	83	54.286
ENSSPAG00000022440	-	58	35.897	ENSSPAG00000002659	RAP2B	95	36.434
ENSSPAG00000022440	-	81	39.752	ENSSPAG00000021333	rab22a	83	39.752
ENSSPAG00000022440	-	86	33.523	ENSSPAG00000018992	si:cabz01085950.1	86	33.523
ENSSPAG00000022440	-	82	38.690	ENSSPAG00000007900	rab9a	81	38.690
ENSSPAG00000022440	-	89	36.364	ENSSPAG00000002062	RAB29	90	36.364
ENSSPAG00000022440	-	90	37.566	ENSSPAG00000023345	RAB7A	91	37.566
ENSSPAG00000022440	-	67	30.147	ENSSPAG00000017321	arl2	70	30.147
ENSSPAG00000022440	-	77	36.364	ENSSPAG00000005867	rheb	83	36.364
ENSSPAG00000022440	-	95	42.932	ENSSPAG00000020875	rab18b	93	42.932

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000022440	-	100	99.000	ENSAPOG00000001040	-	100	99.000	Acanthochromis_polyacanthus
ENSSPAG00000022440	-	100	67.164	ENSACIG00000003157	-	100	67.164	Amphilophus_citrinellus
ENSSPAG00000022440	-	100	99.000	ENSAOCG00000015908	-	100	99.000	Amphiprion_ocellaris
ENSSPAG00000022440	-	100	99.000	ENSAPEG00000004121	-	100	99.000	Amphiprion_percula
ENSSPAG00000022440	-	100	94.500	ENSATEG00000023662	-	100	94.500	Anabas_testudineus
ENSSPAG00000022440	-	100	96.500	ENSACLG00000019643	-	100	96.500	Astatotilapia_calliptera
ENSSPAG00000022440	-	100	94.000	ENSCVAG00000022649	-	100	94.000	Cyprinodon_variegatus
ENSSPAG00000022440	-	86	73.837	ENSDARG00000103934	megf8	99	73.837	Danio_rerio
ENSSPAG00000022440	-	100	92.500	ENSGAFG00000014787	-	100	92.500	Gambusia_affinis
ENSSPAG00000022440	-	100	96.500	ENSHBUG00000003728	-	100	96.500	Haplochromis_burtoni
ENSSPAG00000022440	-	100	96.500	ENSMZEG00005015817	-	100	96.500	Maylandia_zebra
ENSSPAG00000022440	-	100	96.500	ENSMMOG00000003924	-	100	96.500	Mola_mola
ENSSPAG00000022440	-	100	96.000	ENSMALG00000020807	-	100	96.000	Monopterus_albus
ENSSPAG00000022440	-	54	90.741	ENSOPRG00000014416	-	100	90.741	Ochotona_princeps
ENSSPAG00000022440	-	100	93.000	ENSORLG00000025395	-	100	93.000	Oryzias_latipes
ENSSPAG00000022440	-	100	93.000	ENSORLG00020009535	-	100	93.000	Oryzias_latipes_hni
ENSSPAG00000022440	-	100	93.500	ENSORLG00015015518	-	100	93.500	Oryzias_latipes_hsok
ENSSPAG00000022440	-	100	89.055	ENSPKIG00000014528	-	100	89.055	Paramormyrops_kingsleyae
ENSSPAG00000022440	-	100	94.000	ENSPFOG00000014418	-	100	94.000	Poecilia_formosa
ENSSPAG00000022440	-	100	94.000	ENSPLAG00000003181	-	100	94.000	Poecilia_latipinna
ENSSPAG00000022440	-	100	94.000	ENSPMEG00000022988	-	100	94.000	Poecilia_mexicana
ENSSPAG00000022440	-	100	94.000	ENSPMEG00000008020	-	100	94.000	Poecilia_mexicana
ENSSPAG00000022440	-	100	95.500	ENSPNYG00000004681	-	100	95.500	Pundamilia_nyererei
ENSSPAG00000022440	-	100	91.500	ENSSFOG00015021754	rab13	100	91.500	Scleropages_formosus
ENSSPAG00000022440	-	100	97.500	ENSSMAG00000016376	-	100	97.500	Scophthalmus_maximus
ENSSPAG00000022440	-	100	68.116	ENSSMAG00000002569	-	100	68.116	Scophthalmus_maximus
ENSSPAG00000022440	-	100	99.000	ENSSDUG00000006307	-	100	99.000	Seriola_dumerili
ENSSPAG00000022440	-	100	99.000	ENSSLDG00000015823	-	100	99.000	Seriola_lalandi_dorsalis
ENSSPAG00000022440	-	100	95.500	ENSTNIG00000018319	-	100	95.500	Tetraodon_nigroviridis
ENSSPAG00000022440	-	100	93.000	ENSXMAG00000016094	-	100	93.000	Xiphophorus_maculatus