EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000022562 (Gene tree)
Gene ID: 103362657
Gene Symbol: -
Alias: sfrs1a|sfrs1l|wu:fb52g10|wu:fb97g12|zgc:66146
Full Name: serine/arginine-rich splicing factor 1-like
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 4975 bases
Position: chrKK580662.1:261393-266367
Accession: 103362657
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000030021	RRM_1	PF00076.22	2.8e-32	1	2
ENSSPAP00000030021	RRM_1	PF00076.22	2.8e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000030509	-	2582	XM_008289066	ENSSPAP00000030021	246 (aa)	XP_008287288	UPI000495ECC6

Gene Model

Click here to download ENSSPAG00000022562's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000022562's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000022562	-	67	40.909	ENSSPAG00000002821	srsf5a	59	41.477
ENSSPAG00000022562	-	78	85.437	ENSSPAG00000014152	-	80	85.437
ENSSPAG00000022562	-	72	67.033	ENSSPAG00000006285	srsf9	74	70.718
ENSSPAG00000022562	-	85	40.254	ENSSPAG00000014538	srsf4	92	42.177
ENSSPAG00000022562	-	91	38.672	ENSSPAG00000002362	srsf6a	61	41.573
ENSSPAG00000022562	-	65	42.857	ENSSPAG00000015325	srsf5b	58	40.761

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000022562	-	98	85.597	ENSG00000136450	SRSF1	95	91.935	Homo_sapiens
ENSSPAG00000022562	-	78	88.945	ENSAPOG00000008542	-	80	88.945	Acanthochromis_polyacanthus
ENSSPAG00000022562	-	100	99.187	ENSAPOG00000002748	-	100	99.187	Acanthochromis_polyacanthus
ENSSPAG00000022562	-	78	89.062	ENSAMEG00000002635	SRSF1	77	89.583	Ailuropoda_melanoleuca
ENSSPAG00000022562	-	100	93.089	ENSACIG00000008091	srsf1a	100	93.089	Amphilophus_citrinellus
ENSSPAG00000022562	-	100	99.593	ENSAOCG00000010671	-	100	99.593	Amphiprion_ocellaris
ENSSPAG00000022562	-	78	88.945	ENSAOCG00000000337	-	80	88.945	Amphiprion_ocellaris
ENSSPAG00000022562	-	100	99.593	ENSAPEG00000009915	-	100	99.593	Amphiprion_percula
ENSSPAG00000022562	-	78	88.945	ENSAPEG00000023352	-	79	88.945	Amphiprion_percula
ENSSPAG00000022562	-	100	98.790	ENSATEG00000022403	-	100	98.790	Anabas_testudineus
ENSSPAG00000022562	-	81	87.437	ENSATEG00000021567	-	80	88.083	Anabas_testudineus
ENSSPAG00000022562	-	78	89.637	ENSACAG00000005542	-	78	91.710	Anolis_carolinensis
ENSSPAG00000022562	-	79	68.718	ENSANAG00000025417	-	73	67.708	Aotus_nancymaae
ENSSPAG00000022562	-	98	85.597	ENSANAG00000020583	-	93	91.176	Aotus_nancymaae
ENSSPAG00000022562	-	95	80.753	ENSAMXG00000035996	srsf1a	79	89.394	Astyanax_mexicanus
ENSSPAG00000022562	-	54	77.419	ENSAMXG00000024373	-	72	77.419	Astyanax_mexicanus
ENSSPAG00000022562	-	98	85.597	ENSBTAG00000014766	SRSF1	78	92.746	Bos_taurus
ENSSPAG00000022562	-	98	85.597	ENSCJAG00000041713	-	93	91.176	Callithrix_jacchus
ENSSPAG00000022562	-	78	82.383	ENSCJAG00000008111	-	86	84.456	Callithrix_jacchus
ENSSPAG00000022562	-	98	85.597	ENSCAFG00000017430	SRSF1	76	92.746	Canis_familiaris
ENSSPAG00000022562	-	98	85.597	ENSCAFG00020025632	-	76	92.746	Canis_lupus_dingo
ENSSPAG00000022562	-	78	90.674	ENSCHIG00000010787	SRSF1	78	92.746	Capra_hircus
ENSSPAG00000022562	-	98	85.597	ENSTSYG00000013899	-	93	91.176	Carlito_syrichta
ENSSPAG00000022562	-	98	85.597	ENSCPOG00000032681	-	78	92.746	Cavia_porcellus
ENSSPAG00000022562	-	98	85.597	ENSCCAG00000029484	-	93	91.176	Cebus_capucinus
ENSSPAG00000022562	-	98	85.597	ENSCATG00000042294	-	93	91.176	Cercocebus_atys
ENSSPAG00000022562	-	98	85.597	ENSCLAG00000014707	-	78	92.746	Chinchilla_lanigera
ENSSPAG00000022562	-	98	84.774	ENSCSAG00000005642	-	76	91.710	Chlorocebus_sabaeus
ENSSPAG00000022562	-	78	90.674	ENSCHOG00000001899	SRSF1	78	92.746	Choloepus_hoffmanni
ENSSPAG00000022562	-	98	85.185	ENSCPBG00000009851	-	78	92.228	Chrysemys_picta_bellii
ENSSPAG00000022562	-	98	85.597	ENSCANG00000029726	-	93	91.176	Colobus_angolensis_palliatus
ENSSPAG00000022562	-	98	85.597	ENSCGRG00001000670	Srsf1	76	92.746	Cricetulus_griseus_chok1gshd
ENSSPAG00000022562	-	98	85.597	ENSCGRG00000005590	Srsf1	78	92.746	Cricetulus_griseus_crigri
ENSSPAG00000022562	-	100	96.800	ENSCSEG00000014272	-	100	96.800	Cynoglossus_semilaevis
ENSSPAG00000022562	-	78	82.692	ENSCSEG00000009973	-	79	82.692	Cynoglossus_semilaevis
ENSSPAG00000022562	-	78	87.629	ENSCVAG00000005458	-	90	87.363	Cyprinodon_variegatus
ENSSPAG00000022562	-	100	99.187	ENSCVAG00000018617	-	100	99.187	Cyprinodon_variegatus
ENSSPAG00000022562	-	78	89.637	ENSDARG00000017843	srsf1b	79	92.746	Danio_rerio
ENSSPAG00000022562	-	78	85.222	ENSDARG00000057691	srsf1a	99	86.387	Danio_rerio
ENSSPAG00000022562	-	98	85.597	ENSDNOG00000011737	-	76	92.746	Dasypus_novemcinctus
ENSSPAG00000022562	-	98	85.597	ENSDORG00000015082	Srsf1	78	92.746	Dipodomys_ordii
ENSSPAG00000022562	-	73	90.000	ENSETEG00000005349	-	62	90.000	Echinops_telfairi
ENSSPAG00000022562	-	98	85.597	ENSEASG00005002922	-	76	92.746	Equus_asinus_asinus
ENSSPAG00000022562	-	78	90.674	ENSECAG00000016654	SRSF1	78	92.746	Equus_caballus
ENSSPAG00000022562	-	73	91.111	ENSEEUG00000009255	-	62	91.111	Erinaceus_europaeus
ENSSPAG00000022562	-	78	93.750	ENSELUG00000021646	srsf1a	76	93.750	Esox_lucius
ENSSPAG00000022562	-	98	85.597	ENSFCAG00000002250	-	90	90.608	Felis_catus
ENSSPAG00000022562	-	77	94.340	ENSFALG00000005062	-	76	73.575	Ficedula_albicollis
ENSSPAG00000022562	-	98	85.597	ENSFDAG00000010646	-	78	92.746	Fukomys_damarensis
ENSSPAG00000022562	-	100	98.780	ENSFHEG00000003174	srsf1a	100	98.780	Fundulus_heteroclitus
ENSSPAG00000022562	-	80	89.340	ENSGMOG00000014787	-	80	88.021	Gadus_morhua
ENSSPAG00000022562	-	78	90.155	ENSGALG00000005525	SRSF1	78	92.228	Gallus_gallus
ENSSPAG00000022562	-	78	86.458	ENSGACG00000020621	srsf1b	78	85.417	Gasterosteus_aculeatus
ENSSPAG00000022562	-	98	85.185	ENSGAGG00000022965	-	76	92.228	Gopherus_agassizii
ENSSPAG00000022562	-	98	85.597	ENSGGOG00000004386	SRSF1	93	91.176	Gorilla_gorilla
ENSSPAG00000022562	-	100	99.187	ENSHBUG00000016788	srsf1a	100	99.187	Haplochromis_burtoni
ENSSPAG00000022562	-	66	90.244	ENSHGLG00000000669	-	76	92.683	Heterocephalus_glaber_female
ENSSPAG00000022562	-	66	90.244	ENSHGLG00000000600	-	76	92.683	Heterocephalus_glaber_female
ENSSPAG00000022562	-	98	85.597	ENSHGLG00100016906	-	78	92.746	Heterocephalus_glaber_male
ENSSPAG00000022562	-	79	91.457	ENSHCOG00000018918	srsf1a	78	92.965	Hippocampus_comes
ENSSPAG00000022562	-	78	92.708	ENSIPUG00000008750	srsf1b	78	92.708	Ictalurus_punctatus
ENSSPAG00000022562	-	79	87.065	ENSIPUG00000017039	srsf1a	80	89.055	Ictalurus_punctatus
ENSSPAG00000022562	-	98	85.597	ENSSTOG00000000243	-	91	90.608	Ictidomys_tridecemlineatus
ENSSPAG00000022562	-	50	86.885	ENSJJAG00000014464	-	92	86.179	Jaculus_jaculus
ENSSPAG00000022562	-	98	85.597	ENSJJAG00000000102	-	78	92.746	Jaculus_jaculus
ENSSPAG00000022562	-	100	98.374	ENSKMAG00000019232	srsf1a	100	98.374	Kryptolebias_marmoratus
ENSSPAG00000022562	-	100	98.780	ENSLBEG00000020864	-	100	98.780	Labrus_bergylta
ENSSPAG00000022562	-	78	81.122	ENSLBEG00000015294	-	79	82.143	Labrus_bergylta
ENSSPAG00000022562	-	78	89.583	ENSLACG00000014160	srsf1a	72	89.583	Latimeria_chalumnae
ENSSPAG00000022562	-	78	92.188	ENSLOCG00000005994	srsf1a	78	92.188	Lepisosteus_oculatus
ENSSPAG00000022562	-	78	90.674	ENSLAFG00000025743	SRSF1	78	92.746	Loxodonta_africana
ENSSPAG00000022562	-	98	85.597	ENSMFAG00000040003	-	93	91.176	Macaca_fascicularis
ENSSPAG00000022562	-	98	85.597	ENSMMUG00000004725	SRSF1	93	91.176	Macaca_mulatta
ENSSPAG00000022562	-	99	82.377	ENSMMUG00000003260	-	93	89.062	Macaca_mulatta
ENSSPAG00000022562	-	99	82.787	ENSMNEG00000015983	-	76	89.637	Macaca_nemestrina
ENSSPAG00000022562	-	98	85.597	ENSMNEG00000027680	-	93	91.176	Macaca_nemestrina
ENSSPAG00000022562	-	99	82.305	ENSMLEG00000015243	-	76	87.500	Mandrillus_leucophaeus
ENSSPAG00000022562	-	78	90.674	ENSMLEG00000040509	SRSF1	78	92.746	Mandrillus_leucophaeus
ENSSPAG00000022562	-	78	92.708	ENSMAMG00000019691	-	80	92.708	Mastacembelus_armatus
ENSSPAG00000022562	-	78	89.583	ENSMAMG00000019687	-	78	89.583	Mastacembelus_armatus
ENSSPAG00000022562	-	100	99.593	ENSMAMG00000018454	-	100	99.593	Mastacembelus_armatus
ENSSPAG00000022562	-	98	85.597	ENSMAUG00000021845	Srsf1	78	92.746	Mesocricetus_auratus
ENSSPAG00000022562	-	98	85.597	ENSMICG00000013639	-	93	91.176	Microcebus_murinus
ENSSPAG00000022562	-	98	85.597	ENSMOCG00000001996	Srsf1	78	92.746	Microtus_ochrogaster
ENSSPAG00000022562	-	100	92.276	ENSMMOG00000014354	srsf1a	100	92.276	Mola_mola
ENSSPAG00000022562	-	73	91.713	ENSMODG00000014781	-	62	92.818	Monodelphis_domestica
ENSSPAG00000022562	-	81	80.905	ENSMALG00000007763	-	77	81.771	Monopterus_albus
ENSSPAG00000022562	-	79	98.454	ENSMALG00000017129	-	76	98.454	Monopterus_albus
ENSSPAG00000022562	-	98	85.597	MGP_CAROLIEiJ_G0016943	Srsf1	90	90.608	Mus_caroli
ENSSPAG00000022562	-	98	85.597	ENSMUSG00000018379	Srsf1	90	90.608	Mus_musculus
ENSSPAG00000022562	-	98	85.597	MGP_PahariEiJ_G0018074	Srsf1	74	97.436	Mus_pahari
ENSSPAG00000022562	-	98	85.597	MGP_SPRETEiJ_G0017790	Srsf1	90	90.608	Mus_spretus
ENSSPAG00000022562	-	78	90.674	ENSMPUG00000015369	SRSF1	78	92.746	Mustela_putorius_furo
ENSSPAG00000022562	-	78	90.674	ENSMLUG00000011040	SRSF1	78	92.746	Myotis_lucifugus
ENSSPAG00000022562	-	80	87.374	ENSMLUG00000023995	-	77	86.979	Myotis_lucifugus
ENSSPAG00000022562	-	78	90.674	ENSNGAG00000011395	Srsf1	78	92.746	Nannospalax_galili
ENSSPAG00000022562	-	99	75.000	ENSNBRG00000008041	srsf1b	78	81.250	Neolamprologus_brichardi
ENSSPAG00000022562	-	98	85.597	ENSNLEG00000008088	-	93	91.176	Nomascus_leucogenys
ENSSPAG00000022562	-	53	89.394	ENSOPRG00000001234	-	72	92.424	Ochotona_princeps
ENSSPAG00000022562	-	98	85.597	ENSODEG00000011481	-	78	92.746	Octodon_degus
ENSSPAG00000022562	-	100	99.187	ENSONIG00000013160	-	99	99.187	Oreochromis_niloticus
ENSSPAG00000022562	-	79	91.795	ENSONIG00000004860	-	79	91.667	Oreochromis_niloticus
ENSSPAG00000022562	-	99	63.563	ENSOCUG00000010894	-	75	72.105	Oryctolagus_cuniculus
ENSSPAG00000022562	-	100	99.593	ENSORLG00000004580	srsf1a	100	99.593	Oryzias_latipes
ENSSPAG00000022562	-	100	99.593	ENSORLG00020009456	srsf1a	100	99.593	Oryzias_latipes_hni
ENSSPAG00000022562	-	100	99.187	ENSORLG00015014384	srsf1a	100	99.187	Oryzias_latipes_hsok
ENSSPAG00000022562	-	92	97.797	ENSOMEG00000004106	srsf1a	93	97.797	Oryzias_melastigma
ENSSPAG00000022562	-	83	91.176	ENSOGAG00000025950	-	78	92.746	Otolemur_garnettii
ENSSPAG00000022562	-	78	88.542	ENSOARG00000008323	SRSF1	77	88.542	Ovis_aries
ENSSPAG00000022562	-	98	85.597	ENSPPAG00000043403	-	93	91.176	Pan_paniscus
ENSSPAG00000022562	-	98	85.597	ENSPPRG00000004238	-	90	90.608	Panthera_pardus
ENSSPAG00000022562	-	98	85.597	ENSPTRG00000049077	SRSF1	93	91.176	Pan_troglodytes
ENSSPAG00000022562	-	98	85.597	ENSPANG00000022305	-	93	91.176	Papio_anubis
ENSSPAG00000022562	-	99	67.480	ENSPANG00000030275	-	75	67.692	Papio_anubis
ENSSPAG00000022562	-	78	92.188	ENSPKIG00000012857	srsf1b	78	92.188	Paramormyrops_kingsleyae
ENSSPAG00000022562	-	78	90.674	ENSPKIG00000007204	srsf1a	83	91.710	Paramormyrops_kingsleyae
ENSSPAG00000022562	-	78	82.902	ENSPSIG00000009000	-	72	91.729	Pelodiscus_sinensis
ENSSPAG00000022562	-	96	82.700	ENSPMGG00000005467	-	79	87.629	Periophthalmus_magnuspinnatus
ENSSPAG00000022562	-	100	97.222	ENSPMGG00000013112	-	100	97.222	Periophthalmus_magnuspinnatus
ENSSPAG00000022562	-	98	85.597	ENSPEMG00000021416	Srsf1	78	92.746	Peromyscus_maniculatus_bairdii
ENSSPAG00000022562	-	78	90.722	ENSPCIG00000006076	-	78	92.784	Phascolarctos_cinereus
ENSSPAG00000022562	-	79	87.817	ENSPFOG00000018325	-	69	88.083	Poecilia_formosa
ENSSPAG00000022562	-	79	87.817	ENSPLAG00000008416	srsf1b	78	88.083	Poecilia_latipinna
ENSSPAG00000022562	-	50	98.387	ENSPMEG00000014312	-	99	98.387	Poecilia_mexicana
ENSSPAG00000022562	-	50	98.387	ENSPMEG00000020607	-	99	98.387	Poecilia_mexicana
ENSSPAG00000022562	-	79	87.817	ENSPMEG00000002388	-	78	88.083	Poecilia_mexicana
ENSSPAG00000022562	-	100	99.187	ENSPREG00000009667	srsf1a	100	99.187	Poecilia_reticulata
ENSSPAG00000022562	-	98	85.597	ENSPPYG00000008240	SRSF1	78	92.746	Pongo_abelii
ENSSPAG00000022562	-	78	90.674	ENSPCAG00000005199	SRSF1	78	92.746	Procavia_capensis
ENSSPAG00000022562	-	98	85.597	ENSPCOG00000023654	-	93	91.176	Propithecus_coquereli
ENSSPAG00000022562	-	79	73.737	ENSPCOG00000025736	-	93	72.959	Propithecus_coquereli
ENSSPAG00000022562	-	53	97.143	ENSPVAG00000000519	-	53	97.143	Pteropus_vampyrus
ENSSPAG00000022562	-	95	83.691	ENSPNAG00000022241	srsf1a	78	90.104	Pygocentrus_nattereri
ENSSPAG00000022562	-	78	91.146	ENSPNAG00000014601	srsf1b	78	91.146	Pygocentrus_nattereri
ENSSPAG00000022562	-	78	90.674	ENSRNOG00000050323	Srsf1	78	92.746	Rattus_norvegicus
ENSSPAG00000022562	-	98	85.597	ENSRBIG00000034445	-	93	91.176	Rhinopithecus_bieti
ENSSPAG00000022562	-	98	85.597	ENSRROG00000041506	-	93	91.176	Rhinopithecus_roxellana
ENSSPAG00000022562	-	98	85.597	ENSSBOG00000025377	-	93	91.176	Saimiri_boliviensis_boliviensis
ENSSPAG00000022562	-	78	90.722	ENSSHAG00000002552	-	78	92.784	Sarcophilus_harrisii
ENSSPAG00000022562	-	78	92.188	ENSSFOG00015004800	srsf1a	77	92.188	Scleropages_formosus
ENSSPAG00000022562	-	100	97.561	ENSSMAG00000007018	-	100	97.561	Scophthalmus_maximus
ENSSPAG00000022562	-	78	85.500	ENSSMAG00000009719	-	78	85.500	Scophthalmus_maximus
ENSSPAG00000022562	-	99	73.387	ENSSDUG00000003929	-	83	80.303	Seriola_dumerili
ENSSPAG00000022562	-	100	98.780	ENSSDUG00000011303	-	100	98.780	Seriola_dumerili
ENSSPAG00000022562	-	78	78.756	ENSSLDG00000016868	-	76	78.238	Seriola_lalandi_dorsalis
ENSSPAG00000022562	-	74	82.609	ENSSLDG00000016895	-	77	83.696	Seriola_lalandi_dorsalis
ENSSPAG00000022562	-	100	98.780	ENSSLDG00000010543	-	100	98.780	Seriola_lalandi_dorsalis
ENSSPAG00000022562	-	73	91.111	ENSSARG00000010949	-	62	91.111	Sorex_araneus
ENSSPAG00000022562	-	98	85.185	ENSSPUG00000000804	-	91	90.055	Sphenodon_punctatus
ENSSPAG00000022562	-	98	85.597	ENSSSCG00000017626	-	78	92.746	Sus_scrofa
ENSSPAG00000022562	-	54	88.722	ENSTGUG00000008416	-	72	91.729	Taeniopygia_guttata
ENSSPAG00000022562	-	100	98.780	ENSTRUG00000003691	srsf1a	100	98.780	Takifugu_rubripes
ENSSPAG00000022562	-	100	98.780	ENSTNIG00000016223	srsf1a	99	98.780	Tetraodon_nigroviridis
ENSSPAG00000022562	-	73	88.889	ENSTBEG00000015378	-	62	91.667	Tupaia_belangeri
ENSSPAG00000022562	-	53	89.394	ENSTTRG00000007310	SRSF1	72	92.424	Tursiops_truncatus
ENSSPAG00000022562	-	78	90.674	ENSUAMG00000009858	SRSF1	78	92.746	Ursus_americanus
ENSSPAG00000022562	-	98	85.597	ENSUMAG00000000455	-	76	92.746	Ursus_maritimus
ENSSPAG00000022562	-	78	90.155	ENSVPAG00000010094	SRSF1	78	92.228	Vicugna_pacos
ENSSPAG00000022562	-	98	85.597	ENSVVUG00000011882	-	76	92.746	Vulpes_vulpes
ENSSPAG00000022562	-	78	91.667	ENSXETG00000008954	srsf1	79	84.906	Xenopus_tropicalis
ENSSPAG00000022562	-	100	99.187	ENSXMAG00000011766	srsf1a	100	99.187	Xiphophorus_maculatus