EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000023037 (Gene tree)
Gene ID: 103357607
Gene Symbol: cirbpa
Alias: cirbp|wu:fb12c11|wu:fi20g12|zgc:136559
Full Name: cold inducible RNA binding protein
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 3209 bases
Position: chrKK580335.1:126313-129521
Accession: 103357607
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000030699	RRM_1	PF00076.22	7.5e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000031194	-	1412	XM_008282221	ENSSPAP00000030699	162 (aa)	XP_008280443	-

Gene Model

Click here to download ENSSPAG00000023037's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000023037's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000023037	cirbpa	50	42.105	ENSSPAG00000001196	-	63	42.105
ENSSPAG00000023037	cirbpa	50	42.105	ENSSPAG00000021157	-	63	42.105
ENSSPAG00000023037	cirbpa	57	37.500	ENSSPAG00000018867	elavl4	58	37.333
ENSSPAG00000023037	cirbpa	58	38.889	ENSSPAG00000000990	elavl3	64	38.356
ENSSPAG00000023037	cirbpa	73	32.203	ENSSPAG00000022192	srsf7a	58	33.333
ENSSPAG00000023037	cirbpa	57	38.667	ENSSPAG00000002388	ELAVL2	61	38.667
ENSSPAG00000023037	cirbpa	58	37.234	ENSSPAG00000014538	srsf4	62	34.211
ENSSPAG00000023037	cirbpa	64	37.500	ENSSPAG00000011250	-	68	37.500
ENSSPAG00000023037	cirbpa	71	38.636	ENSSPAG00000021014	hnrnpd	52	38.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000023037	cirbpa	77	81.061	ENSAPOG00000004458	cirbpa	99	65.946	Acanthochromis_polyacanthus
ENSSPAG00000023037	cirbpa	99	72.067	ENSACIG00000016116	cirbpa	100	78.090	Amphilophus_citrinellus
ENSSPAG00000023037	cirbpa	99	64.481	ENSAOCG00000016212	cirbpa	100	69.945	Amphiprion_ocellaris
ENSSPAG00000023037	cirbpa	99	63.043	ENSAPEG00000011989	cirbpa	99	70.000	Amphiprion_percula
ENSSPAG00000023037	cirbpa	99	66.845	ENSATEG00000014985	cirbpa	100	67.760	Anabas_testudineus
ENSSPAG00000023037	cirbpa	99	67.045	ENSACLG00000002094	-	100	77.095	Astatotilapia_calliptera
ENSSPAG00000023037	cirbpa	51	75.904	ENSAMXG00000015612	cirbpb	82	56.571	Astyanax_mexicanus
ENSSPAG00000023037	cirbpa	51	73.494	ENSAMXG00000002894	cirbpa	51	72.840	Astyanax_mexicanus
ENSSPAG00000023037	cirbpa	99	56.410	ENSCSEG00000014344	cirbpa	100	59.694	Cynoglossus_semilaevis
ENSSPAG00000023037	cirbpa	99	67.204	ENSCVAG00000004853	cirbpa	100	70.053	Cyprinodon_variegatus
ENSSPAG00000023037	cirbpa	51	77.108	ENSDARG00000013351	cirbpb	92	50.962	Danio_rerio
ENSSPAG00000023037	cirbpa	51	72.289	ENSDARG00000103672	cirbpa	98	52.747	Danio_rerio
ENSSPAG00000023037	cirbpa	51	73.494	ENSELUG00000019588	cirbpb	100	50.495	Esox_lucius
ENSSPAG00000023037	cirbpa	51	74.699	ENSELUG00000004675	-	55	74.074	Esox_lucius
ENSSPAG00000023037	cirbpa	50	86.420	ENSELUG00000009891	cirbpa	100	58.763	Esox_lucius
ENSSPAG00000023037	cirbpa	98	69.492	ENSFHEG00000002580	cirbpa	100	71.751	Fundulus_heteroclitus
ENSSPAG00000023037	cirbpa	50	83.951	ENSGMOG00000012137	cirbpa	99	59.016	Gadus_morhua
ENSSPAG00000023037	cirbpa	99	50.254	ENSGMOG00000007179	cirbpb	95	53.374	Gadus_morhua
ENSSPAG00000023037	cirbpa	98	69.231	ENSGAFG00000008654	cirbpa	100	70.053	Gambusia_affinis
ENSSPAG00000023037	cirbpa	99	58.639	ENSGACG00000015206	cirbpa	100	62.304	Gasterosteus_aculeatus
ENSSPAG00000023037	cirbpa	99	61.310	ENSGACG00000014978	-	100	64.286	Gasterosteus_aculeatus
ENSSPAG00000023037	cirbpa	50	97.531	ENSHBUG00000022060	cirbpa	100	70.109	Haplochromis_burtoni
ENSSPAG00000023037	cirbpa	66	76.636	ENSHCOG00000001170	cirbpa	99	67.114	Hippocampus_comes
ENSSPAG00000023037	cirbpa	51	78.313	ENSIPUG00000000698	cirbpb	100	52.500	Ictalurus_punctatus
ENSSPAG00000023037	cirbpa	97	70.115	ENSKMAG00000005905	cirbpa	99	67.241	Kryptolebias_marmoratus
ENSSPAG00000023037	cirbpa	73	74.790	ENSLBEG00000027731	-	66	83.951	Labrus_bergylta
ENSSPAG00000023037	cirbpa	99	61.078	ENSLBEG00000000292	cirbpa	100	64.242	Labrus_bergylta
ENSSPAG00000023037	cirbpa	99	63.187	ENSMAMG00000010168	cirbpa	100	70.109	Mastacembelus_armatus
ENSSPAG00000023037	cirbpa	50	97.531	ENSMZEG00005025577	-	100	70.109	Maylandia_zebra
ENSSPAG00000023037	cirbpa	99	61.878	ENSMALG00000020092	cirbpa	99	72.626	Monopterus_albus
ENSSPAG00000023037	cirbpa	50	97.531	ENSNBRG00000019658	cirbpa	100	70.109	Neolamprologus_brichardi
ENSSPAG00000023037	cirbpa	99	68.182	ENSONIG00000010169	cirbpa	100	77.528	Oreochromis_niloticus
ENSSPAG00000023037	cirbpa	99	70.225	ENSORLG00000015433	cirbpa	100	68.715	Oryzias_latipes
ENSSPAG00000023037	cirbpa	99	70.225	ENSORLG00020016909	cirbpa	100	68.715	Oryzias_latipes_hni
ENSSPAG00000023037	cirbpa	99	70.225	ENSORLG00015016636	cirbpa	100	68.715	Oryzias_latipes_hsok
ENSSPAG00000023037	cirbpa	99	71.186	ENSOMEG00000021469	cirbpa	73	68.539	Oryzias_melastigma
ENSSPAG00000023037	cirbpa	97	61.905	ENSPMGG00000017342	cirbpa	93	67.956	Periophthalmus_magnuspinnatus
ENSSPAG00000023037	cirbpa	98	67.760	ENSPFOG00000015653	cirbpa	100	70.652	Poecilia_formosa
ENSSPAG00000023037	cirbpa	98	67.760	ENSPLAG00000011125	cirbpa	100	70.652	Poecilia_latipinna
ENSSPAG00000023037	cirbpa	98	67.760	ENSPMEG00000013878	cirbpa	100	70.652	Poecilia_mexicana
ENSSPAG00000023037	cirbpa	98	68.889	ENSPREG00000018042	cirbpa	97	71.823	Poecilia_reticulata
ENSSPAG00000023037	cirbpa	50	97.531	ENSPNYG00000007198	-	100	70.109	Pundamilia_nyererei
ENSSPAG00000023037	cirbpa	50	72.840	ENSPNAG00000024569	cirbpa	100	56.742	Pygocentrus_nattereri
ENSSPAG00000023037	cirbpa	51	75.904	ENSPNAG00000019997	cirbpb	100	51.244	Pygocentrus_nattereri
ENSSPAG00000023037	cirbpa	99	53.555	ENSSMAG00000002412	cirbpa	99	61.538	Scophthalmus_maximus
ENSSPAG00000023037	cirbpa	99	60.795	ENSSDUG00000016099	cirbpa	100	61.364	Seriola_dumerili
ENSSPAG00000023037	cirbpa	99	62.857	ENSTRUG00000010187	cirbpa	99	67.470	Takifugu_rubripes
ENSSPAG00000023037	cirbpa	99	61.111	ENSTNIG00000000450	cirbpa	100	67.222	Tetraodon_nigroviridis
ENSSPAG00000023037	cirbpa	98	68.889	ENSXCOG00000008262	cirbpa	92	93.151	Xiphophorus_couchianus
ENSSPAG00000023037	cirbpa	99	67.213	ENSXMAG00000019336	cirbpa	100	70.811	Xiphophorus_maculatus