EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPAG00000023160 (Gene tree)
Gene ID: 103357624
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Plus strand
Length: 5141 bases
Position: chrKK580335.1:411987-417127
Accession: 103357624
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000030894	PRP38	PF03371.15	1.9e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000031391	-	1407	XM_008282249	ENSSPAP00000030894	468 (aa)	XP_008280471	UPI0004975513

Gene Model

Click here to download ENSSPAG00000023160's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000023160's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000023160	-	100	97.655	ENSAPOG00000012791	-	100	97.655	Acanthochromis_polyacanthus
ENSSPAG00000023160	-	100	97.655	ENSAPOG00000005297	prpf38b	100	97.655	Acanthochromis_polyacanthus
ENSSPAG00000023160	-	100	97.228	ENSAOCG00000012675	prpf38b	91	97.228	Amphiprion_ocellaris
ENSSPAG00000023160	-	100	97.868	ENSAPEG00000010974	prpf38b	100	97.868	Amphiprion_percula
ENSSPAG00000023160	-	98	92.576	ENSACLG00000001712	prpf38b	98	92.358	Astatotilapia_calliptera
ENSSPAG00000023160	-	97	67.611	ENSDARG00000053101	prpf38b	95	89.634	Danio_rerio
ENSSPAG00000023160	-	100	85.043	ENSFHEG00000002861	prpf38b	62	93.750	Fundulus_heteroclitus
ENSSPAG00000023160	-	100	83.368	ENSGACG00000015154	prpf38b	100	78.947	Gasterosteus_aculeatus
ENSSPAG00000023160	-	98	91.266	ENSHBUG00000022496	prpf38b	98	92.576	Haplochromis_burtoni
ENSSPAG00000023160	-	93	64.871	ENSIPUG00000014942	prpf38b	58	81.655	Ictalurus_punctatus
ENSSPAG00000023160	-	100	88.248	ENSLBEG00000024500	prpf38b	99	88.889	Labrus_bergylta
ENSSPAG00000023160	-	100	93.830	ENSMAMG00000010641	prpf38b	100	93.830	Mastacembelus_armatus
ENSSPAG00000023160	-	98	92.576	ENSMZEG00005025536	prpf38b	98	92.358	Maylandia_zebra
ENSSPAG00000023160	-	98	91.266	ENSPNYG00000007625	prpf38b	98	92.576	Pundamilia_nyererei