EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPAG00000023204 (Gene tree)
Gene ID: 103371023
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein C-like
Gene Type: protein_coding
Species: Stegastes_partitus
Status: putative
Strand: Minus strand
Length: 11466 bases
Position: chrKK581584.1:70012-81477
Accession: 103371023
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPAP00000030950	RRM_1	PF00076.22	6.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPAT00000031447	-	2511	XM_008300232	ENSSPAP00000030950	306 (aa)	XP_008298454	UPI0004983ABD

Gene Model

Click here to download ENSSPAG00000023204's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPAG00000023204's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPAG00000023204	-	75	53.947	ENSSPAG00000013858	-	75	52.655
ENSSPAG00000023204	-	85	84.091	ENSSPAG00000013996	-	86	83.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPAG00000023204	-	72	56.889	ENSG00000184672	RALYL	91	77.922	Homo_sapiens
ENSSPAG00000023204	-	100	97.386	ENSAPOG00000006963	hnrnpc	100	97.386	Acanthochromis_polyacanthus
ENSSPAG00000023204	-	96	94.631	ENSACIG00000000270	-	89	95.489	Amphilophus_citrinellus
ENSSPAG00000023204	-	96	74.662	ENSACIG00000016568	-	95	76.426	Amphilophus_citrinellus
ENSSPAG00000023204	-	100	97.059	ENSAOCG00000003896	-	100	97.059	Amphiprion_ocellaris
ENSSPAG00000023204	-	89	83.032	ENSAOCG00000021616	-	86	82.079	Amphiprion_ocellaris
ENSSPAG00000023204	-	100	97.059	ENSAPEG00000001489	-	100	97.059	Amphiprion_percula
ENSSPAG00000023204	-	91	83.630	ENSAPEG00000019962	-	85	81.227	Amphiprion_percula
ENSSPAG00000023204	-	92	95.053	ENSATEG00000011734	-	91	95.000	Anabas_testudineus
ENSSPAG00000023204	-	85	83.083	ENSATEG00000018006	-	94	75.665	Anabas_testudineus
ENSSPAG00000023204	-	72	51.681	ENSAPLG00000015574	RALYL	79	52.991	Anas_platyrhynchos
ENSSPAG00000023204	-	72	50.847	ENSACAG00000028464	RALYL	78	52.564	Anolis_carolinensis
ENSSPAG00000023204	-	72	56.444	ENSANAG00000023383	RALYL	78	53.478	Aotus_nancymaae
ENSSPAG00000023204	-	100	89.251	ENSACLG00000000995	-	92	94.286	Astatotilapia_calliptera
ENSSPAG00000023204	-	100	88.599	ENSACLG00000013636	-	94	93.214	Astatotilapia_calliptera
ENSSPAG00000023204	-	85	81.579	ENSACLG00000005707	-	92	82.288	Astatotilapia_calliptera
ENSSPAG00000023204	-	85	81.853	ENSAMXG00000034915	zgc:55733	91	80.608	Astyanax_mexicanus
ENSSPAG00000023204	-	68	77.512	ENSAMXG00000042946	hnrnpc	97	76.316	Astyanax_mexicanus
ENSSPAG00000023204	-	72	56.444	ENSCJAG00000000402	RALYL	78	53.478	Callithrix_jacchus
ENSSPAG00000023204	-	72	52.321	ENSCPOG00000012314	RALYL	78	53.527	Cavia_porcellus
ENSSPAG00000023204	-	72	56.889	ENSCCAG00000025003	RALYL	75	77.922	Cebus_capucinus
ENSSPAG00000023204	-	72	56.889	ENSCATG00000042145	RALYL	78	53.913	Cercocebus_atys
ENSSPAG00000023204	-	72	52.321	ENSCLAG00000005228	RALYL	78	53.527	Chinchilla_lanigera
ENSSPAG00000023204	-	68	52.655	ENSCHOG00000013228	RALYL	74	51.802	Choloepus_hoffmanni
ENSSPAG00000023204	-	72	56.889	ENSCANG00000039144	RALYL	78	54.978	Colobus_angolensis_palliatus
ENSSPAG00000023204	-	72	52.101	ENSCGRG00001009241	Ralyl	78	53.419	Cricetulus_griseus_chok1gshd
ENSSPAG00000023204	-	84	77.395	ENSCSEG00000021349	-	84	77.289	Cynoglossus_semilaevis
ENSSPAG00000023204	-	70	82.028	ENSCSEG00000019769	-	72	80.282	Cynoglossus_semilaevis
ENSSPAG00000023204	-	89	73.723	ENSCVAG00000002797	-	90	70.787	Cyprinodon_variegatus
ENSSPAG00000023204	-	81	86.614	ENSCVAG00000016981	-	86	79.152	Cyprinodon_variegatus
ENSSPAG00000023204	-	91	82.374	ENSDARG00000103845	zgc:55733	94	82.308	Danio_rerio
ENSSPAG00000023204	-	78	81.818	ENSDARG00000053810	hnrnpc	82	80.303	Danio_rerio
ENSSPAG00000023204	-	72	52.521	ENSDORG00000003721	Ralyl	78	53.846	Dipodomys_ordii
ENSSPAG00000023204	-	53	56.322	ENSETEG00000014028	RALYL	81	60.000	Echinops_telfairi
ENSSPAG00000023204	-	73	48.908	ENSEBUG00000006049	RALYL	92	43.446	Eptatretus_burgeri
ENSSPAG00000023204	-	70	46.256	ENSEBUG00000012363	hnrnpc	65	45.701	Eptatretus_burgeri
ENSSPAG00000023204	-	72	52.941	ENSEEUG00000007202	RALYL	80	54.506	Erinaceus_europaeus
ENSSPAG00000023204	-	79	84.170	ENSELUG00000007714	-	94	79.496	Esox_lucius
ENSSPAG00000023204	-	85	82.463	ENSELUG00000004132	-	91	83.271	Esox_lucius
ENSSPAG00000023204	-	68	57.209	ENSFALG00000008647	RALYL	96	58.019	Ficedula_albicollis
ENSSPAG00000023204	-	92	86.972	ENSFHEG00000003605	-	92	86.121	Fundulus_heteroclitus
ENSSPAG00000023204	-	83	81.181	ENSFHEG00000007278	-	93	74.675	Fundulus_heteroclitus
ENSSPAG00000023204	-	72	54.667	ENSGALG00000036938	RALYL	78	52.991	Gallus_gallus
ENSSPAG00000023204	-	95	76.271	ENSGAFG00000020992	-	95	74.532	Gambusia_affinis
ENSSPAG00000023204	-	92	85.915	ENSGAFG00000020486	-	92	85.765	Gambusia_affinis
ENSSPAG00000023204	-	83	84.231	ENSGACG00000017772	-	98	81.203	Gasterosteus_aculeatus
ENSSPAG00000023204	-	71	77.130	ENSGACG00000018932	-	87	74.074	Gasterosteus_aculeatus
ENSSPAG00000023204	-	72	56.889	ENSGGOG00000000841	RALYL	78	53.913	Gorilla_gorilla
ENSSPAG00000023204	-	85	81.203	ENSHBUG00000010527	-	86	81.227	Haplochromis_burtoni
ENSSPAG00000023204	-	100	89.577	ENSHBUG00000018342	-	92	94.643	Haplochromis_burtoni
ENSSPAG00000023204	-	72	51.899	ENSHGLG00000004866	RALYL	78	53.112	Heterocephalus_glaber_female
ENSSPAG00000023204	-	72	51.899	ENSHGLG00100017480	RALYL	78	53.112	Heterocephalus_glaber_male
ENSSPAG00000023204	-	83	80.074	ENSHCOG00000012333	hnrnpc	95	73.379	Hippocampus_comes
ENSSPAG00000023204	-	84	81.395	ENSIPUG00000011271	hnrnpc	97	83.333	Ictalurus_punctatus
ENSSPAG00000023204	-	86	80.608	ENSIPUG00000008666	zgc:55733	93	83.333	Ictalurus_punctatus
ENSSPAG00000023204	-	72	52.101	ENSSTOG00000012583	RALYL	80	53.419	Ictidomys_tridecemlineatus
ENSSPAG00000023204	-	92	90.714	ENSKMAG00000011170	-	90	90.323	Kryptolebias_marmoratus
ENSSPAG00000023204	-	81	81.890	ENSKMAG00000018265	-	85	80.866	Kryptolebias_marmoratus
ENSSPAG00000023204	-	84	82.061	ENSLBEG00000006193	-	85	83.942	Labrus_bergylta
ENSSPAG00000023204	-	95	86.348	ENSLBEG00000006979	-	99	84.589	Labrus_bergylta
ENSSPAG00000023204	-	96	81.967	ENSLBEG00000024418	-	99	79.734	Labrus_bergylta
ENSSPAG00000023204	-	85	73.333	ENSLOCG00000002560	hnrnpc	92	73.606	Lepisosteus_oculatus
ENSSPAG00000023204	-	72	56.889	ENSMNEG00000033288	RALYL	78	53.913	Macaca_nemestrina
ENSSPAG00000023204	-	72	56.889	ENSMLEG00000038284	RALYL	78	53.913	Mandrillus_leucophaeus
ENSSPAG00000023204	-	85	81.203	ENSMAMG00000008033	-	94	80.657	Mastacembelus_armatus
ENSSPAG00000023204	-	100	92.532	ENSMAMG00000012236	-	91	94.286	Mastacembelus_armatus
ENSSPAG00000023204	-	85	81.579	ENSMZEG00005024249	-	86	82.288	Maylandia_zebra
ENSSPAG00000023204	-	100	89.251	ENSMZEG00005020460	-	92	94.286	Maylandia_zebra
ENSSPAG00000023204	-	72	52.101	ENSMAUG00000015149	Ralyl	78	53.419	Mesocricetus_auratus
ENSSPAG00000023204	-	72	55.310	ENSMICG00000005558	RALYL	78	77.922	Microcebus_murinus
ENSSPAG00000023204	-	72	52.101	ENSMOCG00000017371	Ralyl	78	53.419	Microtus_ochrogaster
ENSSPAG00000023204	-	81	83.936	ENSMMOG00000019520	-	91	82.418	Mola_mola
ENSSPAG00000023204	-	83	92.157	ENSMMOG00000021465	-	93	92.830	Mola_mola
ENSSPAG00000023204	-	88	83.582	ENSMALG00000007520	-	89	84.091	Monopterus_albus
ENSSPAG00000023204	-	85	84.733	ENSMALG00000014623	-	84	83.083	Monopterus_albus
ENSSPAG00000023204	-	72	51.681	ENSMUSG00000039717	Ralyl	91	76.623	Mus_musculus
ENSSPAG00000023204	-	72	53.361	ENSMPUG00000010724	RALYL	78	52.564	Mustela_putorius_furo
ENSSPAG00000023204	-	72	52.101	ENSNGAG00000013375	Ralyl	95	44.194	Nannospalax_galili
ENSSPAG00000023204	-	97	91.275	ENSNBRG00000004912	-	88	94.340	Neolamprologus_brichardi
ENSSPAG00000023204	-	85	81.203	ENSNBRG00000015676	-	93	74.812	Neolamprologus_brichardi
ENSSPAG00000023204	-	72	56.889	ENSNLEG00000002702	RALYL	74	53.913	Nomascus_leucogenys
ENSSPAG00000023204	-	58	49.741	ENSOPRG00000013650	-	98	48.744	Ochotona_princeps
ENSSPAG00000023204	-	72	53.361	ENSODEG00000001012	RALYL	78	53.527	Octodon_degus
ENSSPAG00000023204	-	99	87.781	ENSONIG00000007859	-	99	88.462	Oreochromis_niloticus
ENSSPAG00000023204	-	85	81.203	ENSONIG00000018350	-	86	81.227	Oreochromis_niloticus
ENSSPAG00000023204	-	100	79.870	ENSORLG00000009999	-	91	81.071	Oryzias_latipes
ENSSPAG00000023204	-	81	81.992	ENSORLG00000003144	-	84	81.915	Oryzias_latipes
ENSSPAG00000023204	-	100	79.545	ENSORLG00020018228	hnrnpc	92	80.427	Oryzias_latipes_hni
ENSSPAG00000023204	-	100	79.870	ENSORLG00015019755	-	91	81.071	Oryzias_latipes_hsok
ENSSPAG00000023204	-	81	81.992	ENSORLG00015009460	-	84	81.915	Oryzias_latipes_hsok
ENSSPAG00000023204	-	81	83.858	ENSOMEG00000022665	-	85	83.636	Oryzias_melastigma
ENSSPAG00000023204	-	86	81.273	ENSOMEG00000020488	-	91	81.851	Oryzias_melastigma
ENSSPAG00000023204	-	72	56.889	ENSPPAG00000038705	RALYL	78	53.913	Pan_paniscus
ENSSPAG00000023204	-	72	55.947	ENSPPRG00000018612	RALYL	78	56.250	Panthera_pardus
ENSSPAG00000023204	-	72	55.947	ENSPTIG00000020331	RALYL	78	56.250	Panthera_tigris_altaica
ENSSPAG00000023204	-	72	56.889	ENSPTRG00000020381	RALYL	78	53.913	Pan_troglodytes
ENSSPAG00000023204	-	72	56.889	ENSPANG00000029305	RALYL	78	53.913	Papio_anubis
ENSSPAG00000023204	-	92	78.819	ENSPKIG00000022837	-	85	84.559	Paramormyrops_kingsleyae
ENSSPAG00000023204	-	91	81.185	ENSPKIG00000008592	-	86	82.051	Paramormyrops_kingsleyae
ENSSPAG00000023204	-	72	51.681	ENSPSIG00000011135	RALYL	78	52.991	Pelodiscus_sinensis
ENSSPAG00000023204	-	71	90.826	ENSPMGG00000013144	-	81	87.793	Periophthalmus_magnuspinnatus
ENSSPAG00000023204	-	66	80.392	ENSPMGG00000017774	-	86	68.599	Periophthalmus_magnuspinnatus
ENSSPAG00000023204	-	72	52.101	ENSPEMG00000016447	Ralyl	78	53.419	Peromyscus_maniculatus_bairdii
ENSSPAG00000023204	-	68	54.148	ENSPMAG00000002407	RALYL	96	52.915	Petromyzon_marinus
ENSSPAG00000023204	-	95	73.290	ENSPFOG00000002643	-	86	80.645	Poecilia_formosa
ENSSPAG00000023204	-	92	88.070	ENSPFOG00000001583	-	92	87.589	Poecilia_formosa
ENSSPAG00000023204	-	92	87.324	ENSPLAG00000015305	-	92	86.833	Poecilia_latipinna
ENSSPAG00000023204	-	81	82.609	ENSPLAG00000000061	-	85	80.645	Poecilia_latipinna
ENSSPAG00000023204	-	92	88.028	ENSPMEG00000004802	-	92	87.189	Poecilia_mexicana
ENSSPAG00000023204	-	81	82.213	ENSPMEG00000016524	-	86	82.079	Poecilia_mexicana
ENSSPAG00000023204	-	81	81.818	ENSPREG00000001852	-	92	79.710	Poecilia_reticulata
ENSSPAG00000023204	-	92	86.620	ENSPREG00000007928	-	92	86.121	Poecilia_reticulata
ENSSPAG00000023204	-	72	46.818	ENSPPYG00000018710	-	63	78.022	Pongo_abelii
ENSSPAG00000023204	-	72	51.899	ENSPVAG00000010821	RALYL	78	52.790	Pteropus_vampyrus
ENSSPAG00000023204	-	89	88.129	ENSPNYG00000020293	-	91	92.830	Pundamilia_nyererei
ENSSPAG00000023204	-	97	72.697	ENSPNYG00000003747	-	91	81.319	Pundamilia_nyererei
ENSSPAG00000023204	-	86	74.815	ENSPNAG00000019200	zgc:55733	86	74.908	Pygocentrus_nattereri
ENSSPAG00000023204	-	79	80.992	ENSPNAG00000015686	hnrnpc	88	79.693	Pygocentrus_nattereri
ENSSPAG00000023204	-	72	56.889	ENSRROG00000023925	RALYL	80	75.949	Rhinopithecus_roxellana
ENSSPAG00000023204	-	82	81.226	ENSSFOG00015012924	-	80	97.468	Scleropages_formosus
ENSSPAG00000023204	-	83	79.087	ENSSFOG00015012015	-	98	74.254	Scleropages_formosus
ENSSPAG00000023204	-	87	90.335	ENSSMAG00000013592	-	90	90.036	Scophthalmus_maximus
ENSSPAG00000023204	-	95	71.186	ENSSMAG00000011147	-	96	74.532	Scophthalmus_maximus
ENSSPAG00000023204	-	100	95.752	ENSSDUG00000001723	-	100	95.752	Seriola_dumerili
ENSSPAG00000023204	-	98	78.778	ENSSDUG00000006730	-	86	84.559	Seriola_dumerili
ENSSPAG00000023204	-	91	96.029	ENSSLDG00000007454	-	92	95.699	Seriola_lalandi_dorsalis
ENSSPAG00000023204	-	85	86.312	ENSSLDG00000007474	-	92	84.701	Seriola_lalandi_dorsalis
ENSSPAG00000023204	-	70	52.790	ENSTGUG00000011689	RALYL	78	54.148	Taeniopygia_guttata
ENSSPAG00000023204	-	83	86.957	ENSTRUG00000020158	-	88	87.925	Takifugu_rubripes
ENSSPAG00000023204	-	82	81.496	ENSTNIG00000000334	-	97	79.167	Tetraodon_nigroviridis
ENSSPAG00000023204	-	83	83.784	ENSTNIG00000007427	-	88	84.074	Tetraodon_nigroviridis
ENSSPAG00000023204	-	70	48.927	ENSTBEG00000005551	RALYL	88	47.034	Tupaia_belangeri
ENSSPAG00000023204	-	72	49.793	ENSTTRG00000015762	RALYL	78	52.193	Tursiops_truncatus
ENSSPAG00000023204	-	72	51.327	ENSVPAG00000008501	RALYL	78	52.018	Vicugna_pacos
ENSSPAG00000023204	-	86	80.755	ENSXCOG00000006552	-	86	79.924	Xiphophorus_couchianus
ENSSPAG00000023204	-	50	90.184	ENSXCOG00000019434	-	69	89.506	Xiphophorus_couchianus
ENSSPAG00000023204	-	81	81.818	ENSXMAG00000022849	-	89	79.348	Xiphophorus_maculatus
ENSSPAG00000023204	-	92	86.268	ENSXMAG00000009333	-	92	85.409	Xiphophorus_maculatus