EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000000136 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 275397 bases
Position: chrQEPC01013004.1:136-275532
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000000160	zf-C2H2	PF00096.26	7.2e-100	1	16
ENSSPUP00000000160	zf-C2H2	PF00096.26	7.2e-100	2	16
ENSSPUP00000000160	zf-C2H2	PF00096.26	7.2e-100	3	16
ENSSPUP00000000160	zf-C2H2	PF00096.26	7.2e-100	4	16
ENSSPUP00000000160	zf-C2H2	PF00096.26	7.2e-100	5	16
ENSSPUP00000000160	zf-C2H2	PF00096.26	7.2e-100	6	16
ENSSPUP00000000160	zf-C2H2	PF00096.26	7.2e-100	7	16
ENSSPUP00000000160	zf-C2H2	PF00096.26	7.2e-100	8	16
ENSSPUP00000000160	zf-C2H2	PF00096.26	7.2e-100	9	16
ENSSPUP00000000160	zf-C2H2	PF00096.26	7.2e-100	10	16
ENSSPUP00000000160	zf-C2H2	PF00096.26	7.2e-100	11	16
ENSSPUP00000000160	zf-C2H2	PF00096.26	7.2e-100	12	16
ENSSPUP00000000160	zf-C2H2	PF00096.26	7.2e-100	13	16
ENSSPUP00000000160	zf-C2H2	PF00096.26	7.2e-100	14	16
ENSSPUP00000000160	zf-C2H2	PF00096.26	7.2e-100	15	16
ENSSPUP00000000160	zf-C2H2	PF00096.26	7.2e-100	16	16
ENSSPUP00000000152	zf-C2H2	PF00096.26	1.4e-95	1	16
ENSSPUP00000000152	zf-C2H2	PF00096.26	1.4e-95	2	16
ENSSPUP00000000152	zf-C2H2	PF00096.26	1.4e-95	3	16
ENSSPUP00000000152	zf-C2H2	PF00096.26	1.4e-95	4	16
ENSSPUP00000000152	zf-C2H2	PF00096.26	1.4e-95	5	16
ENSSPUP00000000152	zf-C2H2	PF00096.26	1.4e-95	6	16
ENSSPUP00000000152	zf-C2H2	PF00096.26	1.4e-95	7	16
ENSSPUP00000000152	zf-C2H2	PF00096.26	1.4e-95	8	16
ENSSPUP00000000152	zf-C2H2	PF00096.26	1.4e-95	9	16
ENSSPUP00000000152	zf-C2H2	PF00096.26	1.4e-95	10	16
ENSSPUP00000000152	zf-C2H2	PF00096.26	1.4e-95	11	16
ENSSPUP00000000152	zf-C2H2	PF00096.26	1.4e-95	12	16
ENSSPUP00000000152	zf-C2H2	PF00096.26	1.4e-95	13	16
ENSSPUP00000000152	zf-C2H2	PF00096.26	1.4e-95	14	16
ENSSPUP00000000152	zf-C2H2	PF00096.26	1.4e-95	15	16
ENSSPUP00000000152	zf-C2H2	PF00096.26	1.4e-95	16	16
ENSSPUP00000000160	zf-met	PF12874.7	1.8e-15	1	3
ENSSPUP00000000160	zf-met	PF12874.7	1.8e-15	2	3
ENSSPUP00000000160	zf-met	PF12874.7	1.8e-15	3	3
ENSSPUP00000000152	zf-met	PF12874.7	1.2e-12	1	3
ENSSPUP00000000152	zf-met	PF12874.7	1.2e-12	2	3
ENSSPUP00000000152	zf-met	PF12874.7	1.2e-12	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000000170	-	1653	-	ENSSPUP00000000152	550 (aa)	-	-
ENSSPUT00000000178	-	1689	-	ENSSPUP00000000160	562 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000000136's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000000136's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000000136	-	88	41.176	ENSSPUG00000015298	PATZ1	51	41.176
ENSSPUG00000000136	-	98	56.774	ENSSPUG00000007147	-	93	56.869
ENSSPUG00000000136	-	91	45.802	ENSSPUG00000010087	ZBTB14	51	45.802
ENSSPUG00000000136	-	89	37.748	ENSSPUG00000018637	SCRT2	65	38.636
ENSSPUG00000000136	-	94	39.726	ENSSPUG00000010618	MAZ	67	35.533
ENSSPUG00000000136	-	99	63.636	ENSSPUG00000004366	-	79	63.636
ENSSPUG00000000136	-	99	69.298	ENSSPUG00000018867	-	99	69.298
ENSSPUG00000000136	-	99	64.729	ENSSPUG00000010059	-	87	62.756
ENSSPUG00000000136	-	97	75.419	ENSSPUG00000009898	-	98	70.866
ENSSPUG00000000136	-	91	42.466	ENSSPUG00000008417	ZNF770	96	42.466
ENSSPUG00000000136	-	91	37.226	ENSSPUG00000018057	SNAI1	59	37.226
ENSSPUG00000000136	-	99	57.509	ENSSPUG00000000229	-	88	57.509
ENSSPUG00000000136	-	84	39.216	ENSSPUG00000001720	OVOL2	63	39.216
ENSSPUG00000000136	-	98	46.078	ENSSPUG00000009941	PRDM5	74	46.078
ENSSPUG00000000136	-	97	50.262	ENSSPUG00000007609	ZBTB49	53	50.262
ENSSPUG00000000136	-	96	62.634	ENSSPUG00000009764	-	65	61.013
ENSSPUG00000000136	-	99	53.982	ENSSPUG00000007064	-	98	53.982
ENSSPUG00000000136	-	90	30.100	ENSSPUG00000013355	PRDM15	50	30.800
ENSSPUG00000000136	-	93	43.137	ENSSPUG00000000709	ZNF236	71	43.137
ENSSPUG00000000136	-	91	42.282	ENSSPUG00000015952	-	53	40.909
ENSSPUG00000000136	-	99	72.727	ENSSPUG00000010016	-	99	72.451
ENSSPUG00000000136	-	94	49.537	ENSSPUG00000014346	MYNN	58	49.537
ENSSPUG00000000136	-	91	40.299	ENSSPUG00000005427	-	54	40.299
ENSSPUG00000000136	-	91	36.562	ENSSPUG00000004147	GZF1	55	36.562
ENSSPUG00000000136	-	90	34.066	ENSSPUG00000005307	GTF3A	73	34.848
ENSSPUG00000000136	-	96	43.750	ENSSPUG00000011420	E4F1	70	41.818
ENSSPUG00000000136	-	99	40.484	ENSSPUG00000011853	ZBTB48	53	40.484

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000000136	-	99	49.087	ENSG00000198482	ZNF808	91	49.407	Homo_sapiens
ENSSPUG00000000136	-	99	53.346	ENSAMEG00000014454	-	99	53.346	Ailuropoda_melanoleuca
ENSSPUG00000000136	-	97	51.034	ENSACIG00000015429	-	91	51.034	Amphilophus_citrinellus
ENSSPUG00000000136	-	99	53.433	ENSACAG00000029487	-	79	53.433	Anolis_carolinensis
ENSSPUG00000000136	-	99	46.918	ENSACAG00000025611	-	66	47.233	Anolis_carolinensis
ENSSPUG00000000136	-	99	49.902	ENSACAG00000013039	-	99	50.891	Anolis_carolinensis
ENSSPUG00000000136	-	98	50.350	ENSACLG00000017576	-	89	50.350	Astatotilapia_calliptera
ENSSPUG00000000136	-	98	56.281	ENSACLG00000019318	-	99	49.194	Astatotilapia_calliptera
ENSSPUG00000000136	-	99	56.813	ENSAMXG00000031900	-	91	56.813	Astyanax_mexicanus
ENSSPUG00000000136	-	99	49.333	ENSAMXG00000037717	-	97	49.669	Astyanax_mexicanus
ENSSPUG00000000136	-	98	48.655	ENSAMXG00000012604	-	97	48.655	Astyanax_mexicanus
ENSSPUG00000000136	-	99	55.587	ENSAMXG00000033500	-	94	55.587	Astyanax_mexicanus
ENSSPUG00000000136	-	99	54.883	ENSAMXG00000025965	-	96	54.883	Astyanax_mexicanus
ENSSPUG00000000136	-	98	53.182	ENSAMXG00000041861	-	94	53.600	Astyanax_mexicanus
ENSSPUG00000000136	-	99	55.882	ENSAMXG00000042938	-	97	55.882	Astyanax_mexicanus
ENSSPUG00000000136	-	99	49.192	ENSAMXG00000009563	-	98	51.179	Astyanax_mexicanus
ENSSPUG00000000136	-	99	51.622	ENSAMXG00000031496	-	88	51.622	Astyanax_mexicanus
ENSSPUG00000000136	-	99	54.664	ENSAMXG00000036762	-	98	54.664	Astyanax_mexicanus
ENSSPUG00000000136	-	98	54.545	ENSAMXG00000041721	-	81	54.545	Astyanax_mexicanus
ENSSPUG00000000136	-	99	52.641	ENSAMXG00000018161	-	97	52.641	Astyanax_mexicanus
ENSSPUG00000000136	-	99	50.732	ENSAMXG00000030530	-	97	50.230	Astyanax_mexicanus
ENSSPUG00000000136	-	99	54.521	ENSAMXG00000029828	-	97	54.521	Astyanax_mexicanus
ENSSPUG00000000136	-	99	55.521	ENSAMXG00000038280	-	97	55.521	Astyanax_mexicanus
ENSSPUG00000000136	-	99	48.860	ENSBTAG00000030470	-	99	48.208	Bos_taurus
ENSSPUG00000000136	-	98	51.748	ENSBTAG00000050322	-	75	52.708	Bos_taurus
ENSSPUG00000000136	-	99	49.307	ENSCHIG00000020931	-	79	49.705	Capra_hircus
ENSSPUG00000000136	-	99	48.871	ENSCATG00000036940	ZNF808	82	48.871	Cercocebus_atys
ENSSPUG00000000136	-	99	49.209	ENSCSAG00000001974	ZNF808	86	49.209	Chlorocebus_sabaeus
ENSSPUG00000000136	-	99	57.353	ENSCPBG00000003774	-	89	55.157	Chrysemys_picta_bellii
ENSSPUG00000000136	-	99	53.799	ENSCPBG00000017489	-	94	53.632	Chrysemys_picta_bellii
ENSSPUG00000000136	-	99	57.538	ENSCPBG00000015500	-	94	57.538	Chrysemys_picta_bellii
ENSSPUG00000000136	-	99	59.396	ENSCPBG00000003130	-	99	56.727	Chrysemys_picta_bellii
ENSSPUG00000000136	-	98	38.819	ENSCING00000024509	-	97	38.732	Ciona_intestinalis
ENSSPUG00000000136	-	99	46.795	ENSCSAVG00000009583	-	100	46.824	Ciona_savignyi
ENSSPUG00000000136	-	91	46.588	ENSCSAVG00000000649	-	99	46.588	Ciona_savignyi
ENSSPUG00000000136	-	99	48.081	ENSCSAVG00000000642	-	100	49.333	Ciona_savignyi
ENSSPUG00000000136	-	99	50.685	ENSCANG00000019002	ZNF808	81	49.491	Colobus_angolensis_palliatus
ENSSPUG00000000136	-	97	47.891	ENSCGRG00001011966	Zfp715	67	47.228	Cricetulus_griseus_chok1gshd
ENSSPUG00000000136	-	99	47.047	ENSCGRG00001012523	-	100	46.289	Cricetulus_griseus_chok1gshd
ENSSPUG00000000136	-	97	47.891	ENSCGRG00000013626	Zfp715	64	47.228	Cricetulus_griseus_crigri
ENSSPUG00000000136	-	99	50.681	ENSEBUG00000014648	-	78	49.805	Eptatretus_burgeri
ENSSPUG00000000136	-	99	44.548	ENSEBUG00000006987	-	98	44.548	Eptatretus_burgeri
ENSSPUG00000000136	-	99	46.939	ENSEBUG00000006249	-	92	46.750	Eptatretus_burgeri
ENSSPUG00000000136	-	98	54.237	ENSEBUG00000008903	-	95	53.933	Eptatretus_burgeri
ENSSPUG00000000136	-	99	45.753	ENSEBUG00000009909	-	86	45.753	Eptatretus_burgeri
ENSSPUG00000000136	-	99	47.500	ENSEBUG00000010472	-	83	47.500	Eptatretus_burgeri
ENSSPUG00000000136	-	97	47.600	ENSEBUG00000003455	-	83	47.600	Eptatretus_burgeri
ENSSPUG00000000136	-	98	47.236	ENSEBUG00000005012	-	62	47.500	Eptatretus_burgeri
ENSSPUG00000000136	-	98	43.020	ENSEBUG00000006129	-	80	41.912	Eptatretus_burgeri
ENSSPUG00000000136	-	99	46.293	ENSEBUG00000014597	-	84	46.293	Eptatretus_burgeri
ENSSPUG00000000136	-	98	39.575	ENSEBUG00000003078	-	72	39.575	Eptatretus_burgeri
ENSSPUG00000000136	-	99	47.222	ENSEBUG00000005703	-	85	47.222	Eptatretus_burgeri
ENSSPUG00000000136	-	99	48.177	ENSEBUG00000001972	-	73	48.177	Eptatretus_burgeri
ENSSPUG00000000136	-	97	44.690	ENSEBUG00000014542	-	70	41.961	Eptatretus_burgeri
ENSSPUG00000000136	-	96	46.602	ENSGAFG00000017066	-	73	46.602	Gambusia_affinis
ENSSPUG00000000136	-	99	58.170	ENSGAGG00000002828	-	68	58.170	Gopherus_agassizii
ENSSPUG00000000136	-	99	58.193	ENSGAGG00000006323	-	95	56.774	Gopherus_agassizii
ENSSPUG00000000136	-	91	46.906	ENSGAGG00000017094	-	52	46.906	Gopherus_agassizii
ENSSPUG00000000136	-	97	55.789	ENSGAGG00000001469	-	91	55.856	Gopherus_agassizii
ENSSPUG00000000136	-	99	53.957	ENSGAGG00000014389	-	97	55.439	Gopherus_agassizii
ENSSPUG00000000136	-	99	48.988	ENSGGOG00000003352	ZNF808	78	48.708	Gorilla_gorilla
ENSSPUG00000000136	-	99	51.376	ENSHBUG00000001075	-	97	51.376	Haplochromis_burtoni
ENSSPUG00000000136	-	99	47.332	ENSLACG00000014708	-	76	47.332	Latimeria_chalumnae
ENSSPUG00000000136	-	99	48.871	ENSMFAG00000007422	ZNF808	83	48.871	Macaca_fascicularis
ENSSPUG00000000136	-	99	48.871	ENSMMUG00000012083	ZNF808	83	48.871	Macaca_mulatta
ENSSPUG00000000136	-	99	49.076	ENSMNEG00000043562	ZNF808	83	49.076	Macaca_nemestrina
ENSSPUG00000000136	-	98	49.545	ENSMLEG00000038043	ZNF808	74	50.769	Mandrillus_leucophaeus
ENSSPUG00000000136	-	97	53.846	ENSMZEG00005021865	-	95	51.462	Maylandia_zebra
ENSSPUG00000000136	-	99	51.829	ENSMZEG00005025012	-	98	49.825	Maylandia_zebra
ENSSPUG00000000136	-	98	54.857	ENSMICG00000042544	-	75	54.857	Microcebus_murinus
ENSSPUG00000000136	-	99	51.724	ENSMODG00000018622	-	99	51.627	Monodelphis_domestica
ENSSPUG00000000136	-	99	47.484	MGP_CAROLIEiJ_G0029427	-	88	47.937	Mus_caroli
ENSSPUG00000000136	-	97	47.922	MGP_CAROLIEiJ_G0029614	Zfp715	63	47.922	Mus_caroli
ENSSPUG00000000136	-	99	48.030	MGP_CAROLIEiJ_G0021128	Zfp51	98	48.911	Mus_caroli
ENSSPUG00000000136	-	99	55.847	MGP_CAROLIEiJ_G0029490	Zfp420	98	55.847	Mus_caroli
ENSSPUG00000000136	-	99	45.383	ENSMUSG00000070709	Zfp974	93	45.635	Mus_musculus
ENSSPUG00000000136	-	99	55.864	ENSMUSG00000058402	Zfp420	99	55.864	Mus_musculus
ENSSPUG00000000136	-	97	47.922	ENSMUSG00000012640	Zfp715	63	47.922	Mus_musculus
ENSSPUG00000000136	-	99	46.931	ENSMUSG00000023892	Zfp51	85	48.814	Mus_musculus
ENSSPUG00000000136	-	99	45.098	MGP_PahariEiJ_G0012663	-	81	45.695	Mus_pahari
ENSSPUG00000000136	-	99	47.940	MGP_PahariEiJ_G0023447	Zfp51	87	49.012	Mus_pahari
ENSSPUG00000000136	-	99	55.650	MGP_PahariEiJ_G0012724	Zfp420	99	55.650	Mus_pahari
ENSSPUG00000000136	-	99	45.988	MGP_SPRETEiJ_G0030526	-	87	46.404	Mus_spretus
ENSSPUG00000000136	-	99	45.794	MGP_SPRETEiJ_G0030525	-	83	45.794	Mus_spretus
ENSSPUG00000000136	-	97	47.922	MGP_SPRETEiJ_G0030713	Zfp715	63	47.922	Mus_spretus
ENSSPUG00000000136	-	99	55.864	MGP_SPRETEiJ_G0030586	Zfp420	99	55.864	Mus_spretus
ENSSPUG00000000136	-	99	53.791	ENSMLUG00000015757	-	99	52.611	Myotis_lucifugus
ENSSPUG00000000136	-	99	49.593	ENSMLUG00000009276	-	87	49.593	Myotis_lucifugus
ENSSPUG00000000136	-	98	49.679	ENSNLEG00000006042	ZNF808	77	49.679	Nomascus_leucogenys
ENSSPUG00000000136	-	99	50.289	ENSONIG00000007396	-	99	50.581	Oreochromis_niloticus
ENSSPUG00000000136	-	94	45.278	ENSONIG00000016979	-	99	45.455	Oreochromis_niloticus
ENSSPUG00000000136	-	99	51.332	ENSORLG00000011040	-	87	49.862	Oryzias_latipes
ENSSPUG00000000136	-	99	46.203	ENSOMEG00000001622	-	88	44.337	Oryzias_melastigma
ENSSPUG00000000136	-	99	43.380	ENSOMEG00000018871	-	65	43.380	Oryzias_melastigma
ENSSPUG00000000136	-	98	47.966	ENSOARG00000002896	-	87	48.085	Ovis_aries
ENSSPUG00000000136	-	99	49.190	ENSPPAG00000038086	ZNF808	84	49.407	Pan_paniscus
ENSSPUG00000000136	-	99	50.690	ENSPANG00000011361	ZNF808	83	50.690	Papio_anubis
ENSSPUG00000000136	-	97	45.233	ENSPSIG00000008588	-	100	45.393	Pelodiscus_sinensis
ENSSPUG00000000136	-	99	53.184	ENSPSIG00000009603	-	99	52.826	Pelodiscus_sinensis
ENSSPUG00000000136	-	99	47.399	ENSPEMG00000000548	-	91	48.031	Peromyscus_maniculatus_bairdii
ENSSPUG00000000136	-	99	57.664	ENSPCIG00000018929	-	96	57.664	Phascolarctos_cinereus
ENSSPUG00000000136	-	96	56.667	ENSPLAG00000014660	-	79	48.148	Poecilia_latipinna
ENSSPUG00000000136	-	98	47.692	ENSPREG00000008826	-	91	48.649	Poecilia_reticulata
ENSSPUG00000000136	-	99	49.405	ENSPPYG00000029644	ZNF808	78	49.307	Pongo_abelii
ENSSPUG00000000136	-	99	49.526	ENSPVAG00000009433	-	98	49.526	Pteropus_vampyrus
ENSSPUG00000000136	-	99	51.351	ENSPNAG00000002244	-	85	51.351	Pygocentrus_nattereri
ENSSPUG00000000136	-	98	53.944	ENSPNAG00000021831	-	96	52.027	Pygocentrus_nattereri
ENSSPUG00000000136	-	99	51.724	ENSPNAG00000006039	-	89	52.279	Pygocentrus_nattereri
ENSSPUG00000000136	-	99	54.187	ENSPNAG00000012495	-	82	54.187	Pygocentrus_nattereri
ENSSPUG00000000136	-	99	53.672	ENSPNAG00000016478	-	99	54.492	Pygocentrus_nattereri
ENSSPUG00000000136	-	99	53.388	ENSPNAG00000005829	-	97	50.366	Pygocentrus_nattereri
ENSSPUG00000000136	-	100	58.462	ENSPNAG00000012154	-	94	58.462	Pygocentrus_nattereri
ENSSPUG00000000136	-	97	48.723	ENSRNOG00000043341	Zfp51	91	48.723	Rattus_norvegicus
ENSSPUG00000000136	-	99	53.816	ENSRBIG00000032168	-	94	51.323	Rhinopithecus_bieti
ENSSPUG00000000136	-	99	50.575	ENSRROG00000009467	ZNF808	81	49.695	Rhinopithecus_roxellana
ENSSPUG00000000136	-	99	51.566	ENSSHAG00000003090	-	90	51.566	Sarcophilus_harrisii
ENSSPUG00000000136	-	99	37.639	ENSSLDG00000016301	-	92	37.768	Seriola_lalandi_dorsalis
ENSSPUG00000000136	-	96	55.727	ENSTGUG00000014079	-	100	55.727	Taeniopygia_guttata
ENSSPUG00000000136	-	98	41.020	ENSTNIG00000005023	-	100	40.625	Tetraodon_nigroviridis
ENSSPUG00000000136	-	99	38.032	ENSTNIG00000008100	-	100	38.032	Tetraodon_nigroviridis
ENSSPUG00000000136	-	99	48.387	ENSTBEG00000016262	-	100	48.387	Tupaia_belangeri
ENSSPUG00000000136	-	99	53.933	ENSUMAG00000024602	-	97	50.922	Ursus_maritimus
ENSSPUG00000000136	-	99	53.871	ENSXETG00000016781	-	99	53.871	Xenopus_tropicalis