EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000000176 (Gene tree)
Gene ID: -
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 38181 bases
Position: chrQEPC01000724.1:1190301-1228481
Accession: 25734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000000146	MRP-S27	PF10037.9	4.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000000163	PTCD2-201	1327	-	ENSSPUP00000000146	391 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000000176's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000000176's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000000176	PTCD2	96	51.429	ENSG00000049883	PTCD2	99	51.429	Homo_sapiens
ENSSPUG00000000176	PTCD2	95	43.421	ENSAPOG00000020682	ptcd2	99	43.421	Acanthochromis_polyacanthus
ENSSPUG00000000176	PTCD2	89	53.672	ENSAMEG00000007194	PTCD2	91	53.672	Ailuropoda_melanoleuca
ENSSPUG00000000176	PTCD2	87	43.266	ENSACIG00000002053	ptcd2	100	43.266	Amphilophus_citrinellus
ENSSPUG00000000176	PTCD2	95	43.421	ENSAOCG00000006616	ptcd2	97	43.421	Amphiprion_ocellaris
ENSSPUG00000000176	PTCD2	95	43.947	ENSAPEG00000022926	ptcd2	97	43.947	Amphiprion_percula
ENSSPUG00000000176	PTCD2	96	60.417	ENSACAG00000009747	PTCD2	98	60.417	Anolis_carolinensis
ENSSPUG00000000176	PTCD2	96	53.003	ENSANAG00000029353	PTCD2	99	53.003	Aotus_nancymaae
ENSSPUG00000000176	PTCD2	87	45.977	ENSACLG00000027742	ptcd2	89	45.977	Astatotilapia_calliptera
ENSSPUG00000000176	PTCD2	83	41.796	ENSAMXG00000029404	ptcd2	86	41.796	Astyanax_mexicanus
ENSSPUG00000000176	PTCD2	93	53.639	ENSBTAG00000014675	PTCD2	96	53.639	Bos_taurus
ENSSPUG00000000176	PTCD2	96	52.480	ENSCJAG00000016364	PTCD2	99	52.480	Callithrix_jacchus
ENSSPUG00000000176	PTCD2	96	51.958	ENSCAFG00000007982	PTCD2	90	51.958	Canis_familiaris
ENSSPUG00000000176	PTCD2	87	54.335	ENSCAFG00020019147	PTCD2	97	54.335	Canis_lupus_dingo
ENSSPUG00000000176	PTCD2	96	52.987	ENSCHIG00000017118	PTCD2	100	52.987	Capra_hircus
ENSSPUG00000000176	PTCD2	96	51.169	ENSCPOG00000040168	PTCD2	100	51.169	Cavia_porcellus
ENSSPUG00000000176	PTCD2	96	51.697	ENSCCAG00000029389	-	99	51.697	Cebus_capucinus
ENSSPUG00000000176	PTCD2	75	54.949	ENSCCAG00000021996	-	90	54.949	Cebus_capucinus
ENSSPUG00000000176	PTCD2	96	51.169	ENSCATG00000019069	PTCD2	100	51.169	Cercocebus_atys
ENSSPUG00000000176	PTCD2	90	52.368	ENSCLAG00000000072	PTCD2	94	52.368	Chinchilla_lanigera
ENSSPUG00000000176	PTCD2	88	54.286	ENSCSAG00000015623	PTCD2	100	51.948	Chlorocebus_sabaeus
ENSSPUG00000000176	PTCD2	69	57.647	ENSCHOG00000010634	PTCD2	79	57.647	Choloepus_hoffmanni
ENSSPUG00000000176	PTCD2	96	58.747	ENSCPBG00000000216	PTCD2	98	58.747	Chrysemys_picta_bellii
ENSSPUG00000000176	PTCD2	96	51.948	ENSCANG00000035636	PTCD2	99	51.948	Colobus_angolensis_palliatus
ENSSPUG00000000176	PTCD2	89	53.107	ENSCGRG00001015289	Ptcd2	78	53.107	Cricetulus_griseus_chok1gshd
ENSSPUG00000000176	PTCD2	89	53.107	ENSCGRG00000006193	Ptcd2	78	53.107	Cricetulus_griseus_crigri
ENSSPUG00000000176	PTCD2	87	46.552	ENSCVAG00000001285	ptcd2	89	46.552	Cyprinodon_variegatus
ENSSPUG00000000176	PTCD2	89	46.045	ENSDARG00000035391	ptcd2	92	46.045	Danio_rerio
ENSSPUG00000000176	PTCD2	91	54.237	ENSDNOG00000008719	PTCD2	92	54.237	Dasypus_novemcinctus
ENSSPUG00000000176	PTCD2	91	54.294	ENSDORG00000004921	Ptcd2	93	54.294	Dipodomys_ordii
ENSSPUG00000000176	PTCD2	88	48.433	ENSETEG00000016542	PTCD2	90	48.433	Echinops_telfairi
ENSSPUG00000000176	PTCD2	96	50.653	ENSEASG00005018038	PTCD2	100	50.653	Equus_asinus_asinus
ENSSPUG00000000176	PTCD2	96	51.175	ENSECAG00000007022	PTCD2	98	51.175	Equus_caballus
ENSSPUG00000000176	PTCD2	96	51.414	ENSEEUG00000014031	PTCD2	99	51.414	Erinaceus_europaeus
ENSSPUG00000000176	PTCD2	89	44.225	ENSELUG00000003584	ptcd2	92	44.225	Esox_lucius
ENSSPUG00000000176	PTCD2	79	57.188	ENSFCAG00000045432	PTCD2	73	57.188	Felis_catus
ENSSPUG00000000176	PTCD2	82	52.905	ENSFALG00000010299	PTCD2	99	52.905	Ficedula_albicollis
ENSSPUG00000000176	PTCD2	90	54.039	ENSFDAG00000018461	PTCD2	94	54.039	Fukomys_damarensis
ENSSPUG00000000176	PTCD2	87	45.014	ENSGMOG00000003637	ptcd2	91	45.014	Gadus_morhua
ENSSPUG00000000176	PTCD2	90	51.685	ENSGALG00000038260	PTCD2	100	49.347	Gallus_gallus
ENSSPUG00000000176	PTCD2	96	62.141	ENSGAGG00000021952	PTCD2	98	62.141	Gopherus_agassizii
ENSSPUG00000000176	PTCD2	96	51.429	ENSGGOG00000010695	PTCD2	99	51.429	Gorilla_gorilla
ENSSPUG00000000176	PTCD2	87	45.690	ENSHBUG00000009191	ptcd2	89	45.690	Haplochromis_burtoni
ENSSPUG00000000176	PTCD2	96	51.042	ENSHGLG00000001234	PTCD2	100	51.042	Heterocephalus_glaber_female
ENSSPUG00000000176	PTCD2	90	52.368	ENSHGLG00100015419	PTCD2	94	52.368	Heterocephalus_glaber_male
ENSSPUG00000000176	PTCD2	88	45.845	ENSHCOG00000001703	ptcd2	96	44.624	Hippocampus_comes
ENSSPUG00000000176	PTCD2	84	45.181	ENSIPUG00000006080	ptcd2	86	45.181	Ictalurus_punctatus
ENSSPUG00000000176	PTCD2	94	53.333	ENSSTOG00000006596	PTCD2	98	53.333	Ictidomys_tridecemlineatus
ENSSPUG00000000176	PTCD2	90	53.824	ENSJJAG00000024388	Ptcd2	92	53.824	Jaculus_jaculus
ENSSPUG00000000176	PTCD2	89	42.373	ENSKMAG00000009329	ptcd2	92	42.373	Kryptolebias_marmoratus
ENSSPUG00000000176	PTCD2	87	45.376	ENSLBEG00000024871	ptcd2	88	45.376	Labrus_bergylta
ENSSPUG00000000176	PTCD2	89	52.381	ENSLOCG00000011122	ptcd2	94	51.524	Lepisosteus_oculatus
ENSSPUG00000000176	PTCD2	71	59.206	ENSLAFG00000004115	PTCD2	90	59.075	Loxodonta_africana
ENSSPUG00000000176	PTCD2	96	51.429	ENSMFAG00000031516	PTCD2	99	51.429	Macaca_fascicularis
ENSSPUG00000000176	PTCD2	96	51.948	ENSMNEG00000007537	PTCD2	100	51.948	Macaca_nemestrina
ENSSPUG00000000176	PTCD2	96	51.169	ENSMLEG00000031093	PTCD2	99	51.169	Mandrillus_leucophaeus
ENSSPUG00000000176	PTCD2	96	46.354	ENSMAMG00000018529	ptcd2	100	46.354	Mastacembelus_armatus
ENSSPUG00000000176	PTCD2	87	45.977	ENSMZEG00005003625	ptcd2	89	45.977	Maylandia_zebra
ENSSPUG00000000176	PTCD2	87	52.161	ENSMGAG00000005033	PTCD2	99	52.161	Meleagris_gallopavo
ENSSPUG00000000176	PTCD2	90	41.854	ENSMAUG00000020253	Ptcd2	92	41.854	Mesocricetus_auratus
ENSSPUG00000000176	PTCD2	87	54.651	ENSMICG00000004535	PTCD2	89	54.651	Microcebus_murinus
ENSSPUG00000000176	PTCD2	90	52.528	ENSMOCG00000019985	Ptcd2	93	52.528	Microtus_ochrogaster
ENSSPUG00000000176	PTCD2	95	50.653	ENSMODG00000001695	PTCD2	99	50.653	Monodelphis_domestica
ENSSPUG00000000176	PTCD2	89	45.225	ENSMALG00000022372	ptcd2	93	45.225	Monopterus_albus
ENSSPUG00000000176	PTCD2	90	51.124	MGP_CAROLIEiJ_G0018829	Ptcd2	93	51.124	Mus_caroli
ENSSPUG00000000176	PTCD2	90	50.281	ENSMUSG00000021650	Ptcd2	93	50.281	Mus_musculus
ENSSPUG00000000176	PTCD2	90	51.685	MGP_PahariEiJ_G0015904	Ptcd2	93	51.685	Mus_pahari
ENSSPUG00000000176	PTCD2	90	50.562	MGP_SPRETEiJ_G0019711	Ptcd2	93	50.562	Mus_spretus
ENSSPUG00000000176	PTCD2	96	52.480	ENSMPUG00000014401	PTCD2	100	52.480	Mustela_putorius_furo
ENSSPUG00000000176	PTCD2	92	56.704	ENSMLUG00000007374	PTCD2	92	56.704	Myotis_lucifugus
ENSSPUG00000000176	PTCD2	90	51.404	ENSNGAG00000005027	Ptcd2	93	51.404	Nannospalax_galili
ENSSPUG00000000176	PTCD2	83	44.444	ENSNBRG00000000092	-	100	44.444	Neolamprologus_brichardi
ENSSPUG00000000176	PTCD2	87	46.264	ENSNBRG00000008174	ptcd2	91	46.264	Neolamprologus_brichardi
ENSSPUG00000000176	PTCD2	96	51.948	ENSNLEG00000004516	PTCD2	99	51.948	Nomascus_leucogenys
ENSSPUG00000000176	PTCD2	75	45.819	ENSMEUG00000014012	-	82	45.687	Notamacropus_eugenii
ENSSPUG00000000176	PTCD2	96	49.351	ENSOPRG00000007290	PTCD2	98	49.351	Ochotona_princeps
ENSSPUG00000000176	PTCD2	96	52.073	ENSODEG00000016417	PTCD2	100	52.073	Octodon_degus
ENSSPUG00000000176	PTCD2	70	50.000	ENSONIG00000011269	ptcd2	80	50.000	Oreochromis_niloticus
ENSSPUG00000000176	PTCD2	90	53.090	ENSOCUG00000007970	PTCD2	100	51.436	Oryctolagus_cuniculus
ENSSPUG00000000176	PTCD2	90	44.011	ENSORLG00000003851	ptcd2	91	44.011	Oryzias_latipes
ENSSPUG00000000176	PTCD2	87	43.931	ENSORLG00020009823	ptcd2	93	43.258	Oryzias_latipes_hni
ENSSPUG00000000176	PTCD2	88	43.820	ENSORLG00015016777	ptcd2	99	43.820	Oryzias_latipes_hsok
ENSSPUG00000000176	PTCD2	87	45.087	ENSOMEG00000012396	ptcd2	84	45.087	Oryzias_melastigma
ENSSPUG00000000176	PTCD2	96	51.562	ENSOGAG00000008390	PTCD2	99	51.562	Otolemur_garnettii
ENSSPUG00000000176	PTCD2	90	55.056	ENSOARG00000005087	PTCD2	92	55.056	Ovis_aries
ENSSPUG00000000176	PTCD2	96	51.429	ENSPPAG00000028480	PTCD2	99	51.429	Pan_paniscus
ENSSPUG00000000176	PTCD2	96	51.169	ENSPTRG00000016968	PTCD2	99	51.169	Pan_troglodytes
ENSSPUG00000000176	PTCD2	87	53.623	ENSPANG00000006611	PTCD2	89	53.623	Papio_anubis
ENSSPUG00000000176	PTCD2	96	44.531	ENSPKIG00000019896	ptcd2	100	44.531	Paramormyrops_kingsleyae
ENSSPUG00000000176	PTCD2	82	62.813	ENSPSIG00000014559	PTCD2	99	62.813	Pelodiscus_sinensis
ENSSPUG00000000176	PTCD2	83	55.692	ENSPEMG00000000884	Ptcd2	85	55.692	Peromyscus_maniculatus_bairdii
ENSSPUG00000000176	PTCD2	96	51.429	ENSPCIG00000029047	PTCD2	99	51.429	Phascolarctos_cinereus
ENSSPUG00000000176	PTCD2	84	45.289	ENSPLAG00000010456	ptcd2	92	43.662	Poecilia_latipinna
ENSSPUG00000000176	PTCD2	89	44.633	ENSPREG00000021797	ptcd2	90	44.633	Poecilia_reticulata
ENSSPUG00000000176	PTCD2	96	45.855	ENSPPYG00000015543	PTCD2	99	45.855	Pongo_abelii
ENSSPUG00000000176	PTCD2	72	48.929	ENSPCAG00000006806	PTCD2	89	48.929	Procavia_capensis
ENSSPUG00000000176	PTCD2	94	50.794	ENSPVAG00000010935	PTCD2	97	50.794	Pteropus_vampyrus
ENSSPUG00000000176	PTCD2	87	45.690	ENSPNYG00000003122	ptcd2	89	45.690	Pundamilia_nyererei
ENSSPUG00000000176	PTCD2	89	45.938	ENSPNAG00000021490	ptcd2	93	45.938	Pygocentrus_nattereri
ENSSPUG00000000176	PTCD2	90	52.528	ENSRNOG00000028403	Ptcd2	93	52.528	Rattus_norvegicus
ENSSPUG00000000176	PTCD2	96	47.135	ENSRBIG00000032929	PTCD2	99	47.135	Rhinopithecus_bieti
ENSSPUG00000000176	PTCD2	96	52.208	ENSRROG00000000080	PTCD2	100	52.208	Rhinopithecus_roxellana
ENSSPUG00000000176	PTCD2	96	51.436	ENSSBOG00000018911	PTCD2	100	51.436	Saimiri_boliviensis_boliviensis
ENSSPUG00000000176	PTCD2	96	50.390	ENSSHAG00000003833	PTCD2	99	50.390	Sarcophilus_harrisii
ENSSPUG00000000176	PTCD2	89	47.042	ENSSFOG00015015415	ptcd2	92	47.042	Scleropages_formosus
ENSSPUG00000000176	PTCD2	95	40.849	ENSSMAG00000010350	ptcd2	96	40.849	Scophthalmus_maximus
ENSSPUG00000000176	PTCD2	88	48.169	ENSSDUG00000008142	ptcd2	88	48.169	Seriola_dumerili
ENSSPUG00000000176	PTCD2	88	48.451	ENSSLDG00000015284	ptcd2	92	48.451	Seriola_lalandi_dorsalis
ENSSPUG00000000176	PTCD2	79	47.249	ENSSARG00000004983	PTCD2	99	47.249	Sorex_araneus
ENSSPUG00000000176	PTCD2	89	45.042	ENSSPAG00000008591	ptcd2	90	45.042	Stegastes_partitus
ENSSPUG00000000176	PTCD2	96	52.344	ENSSSCG00000016975	PTCD2	90	52.344	Sus_scrofa
ENSSPUG00000000176	PTCD2	83	53.474	ENSTGUG00000005705	PTCD2	96	53.474	Taeniopygia_guttata
ENSSPUG00000000176	PTCD2	96	50.392	ENSTBEG00000016559	PTCD2	99	50.392	Tupaia_belangeri
ENSSPUG00000000176	PTCD2	89	55.932	ENSTTRG00000011851	PTCD2	91	55.932	Tursiops_truncatus
ENSSPUG00000000176	PTCD2	96	51.175	ENSUAMG00000007583	PTCD2	90	51.175	Ursus_americanus
ENSSPUG00000000176	PTCD2	96	51.175	ENSUMAG00000007666	PTCD2	100	51.175	Ursus_maritimus
ENSSPUG00000000176	PTCD2	96	51.302	ENSVPAG00000009597	PTCD2	99	51.302	Vicugna_pacos
ENSSPUG00000000176	PTCD2	96	51.436	ENSVVUG00000007299	-	100	51.436	Vulpes_vulpes
ENSSPUG00000000176	PTCD2	92	52.055	ENSXETG00000031652	PTCD2	95	52.055	Xenopus_tropicalis
ENSSPUG00000000176	PTCD2	84	46.201	ENSXMAG00000005940	ptcd2	84	44.507	Xiphophorus_maculatus