EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000000229 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 52311 bases
Position: chrQEPC01013004.1:357076-409386
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000000293	zf-C2H2	PF00096.26	4.6e-52	1	8
ENSSPUP00000000293	zf-C2H2	PF00096.26	4.6e-52	2	8
ENSSPUP00000000293	zf-C2H2	PF00096.26	4.6e-52	3	8
ENSSPUP00000000293	zf-C2H2	PF00096.26	4.6e-52	4	8
ENSSPUP00000000293	zf-C2H2	PF00096.26	4.6e-52	5	8
ENSSPUP00000000293	zf-C2H2	PF00096.26	4.6e-52	6	8
ENSSPUP00000000293	zf-C2H2	PF00096.26	4.6e-52	7	8
ENSSPUP00000000293	zf-C2H2	PF00096.26	4.6e-52	8	8
ENSSPUP00000000285	zf-C2H2	PF00096.26	1.8e-50	1	8
ENSSPUP00000000285	zf-C2H2	PF00096.26	1.8e-50	2	8
ENSSPUP00000000285	zf-C2H2	PF00096.26	1.8e-50	3	8
ENSSPUP00000000285	zf-C2H2	PF00096.26	1.8e-50	4	8
ENSSPUP00000000285	zf-C2H2	PF00096.26	1.8e-50	5	8
ENSSPUP00000000285	zf-C2H2	PF00096.26	1.8e-50	6	8
ENSSPUP00000000285	zf-C2H2	PF00096.26	1.8e-50	7	8
ENSSPUP00000000285	zf-C2H2	PF00096.26	1.8e-50	8	8
ENSSPUP00000000285	zf-met	PF12874.7	2e-12	1	1
ENSSPUP00000000293	zf-met	PF12874.7	2.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000000316	-	945	-	ENSSPUP00000000293	314 (aa)	-	-
ENSSPUT00000000308	-	939	-	ENSSPUP00000000285	312 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000000229's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000000229's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000000229	-	86	33.553	ENSSPUG00000005307	GTF3A	72	31.159
ENSSPUG00000000229	-	87	34.975	ENSSPUG00000015298	PATZ1	50	32.850
ENSSPUG00000000229	-	83	37.313	ENSSPUG00000011853	ZBTB48	53	37.313
ENSSPUG00000000229	-	87	49.275	ENSSPUG00000009941	PRDM5	84	40.590
ENSSPUG00000000229	-	90	43.678	ENSSPUG00000000709	ZNF236	66	43.678
ENSSPUG00000000229	-	85	39.773	ENSSPUG00000005427	-	53	39.773
ENSSPUG00000000229	-	86	39.241	ENSSPUG00000018057	SNAI1	59	39.241
ENSSPUG00000000229	-	93	58.983	ENSSPUG00000010016	-	93	62.454
ENSSPUG00000000229	-	92	32.463	ENSSPUG00000018482	ZBTB11	50	34.733
ENSSPUG00000000229	-	99	59.420	ENSSPUG00000009898	-	96	65.714
ENSSPUG00000000229	-	87	39.850	ENSSPUG00000018637	SCRT2	50	39.850
ENSSPUG00000000229	-	88	62.222	ENSSPUG00000009764	-	63	61.818
ENSSPUG00000000229	-	92	34.247	ENSSPUG00000008417	ZNF770	96	34.247
ENSSPUG00000000229	-	93	61.255	ENSSPUG00000018867	-	89	61.567
ENSSPUG00000000229	-	88	60.215	ENSSPUG00000007147	-	90	57.836
ENSSPUG00000000229	-	88	51.542	ENSSPUG00000007064	-	96	51.341
ENSSPUG00000000229	-	88	48.872	ENSSPUG00000007609	ZBTB49	53	48.872
ENSSPUG00000000229	-	88	51.504	ENSSPUG00000007092	-	50	51.504
ENSSPUG00000000229	-	87	36.765	ENSSPUG00000010618	MAZ	67	32.463
ENSSPUG00000000229	-	100	61.172	ENSSPUG00000010059	-	91	61.481
ENSSPUG00000000229	-	86	64.835	ENSSPUG00000004366	-	56	64.835
ENSSPUG00000000229	-	87	51.402	ENSSPUG00000016039	GFI1B	55	51.402
ENSSPUG00000000229	-	88	57.509	ENSSPUG00000000136	-	99	57.509
ENSSPUG00000000229	-	86	38.356	ENSSPUG00000001720	OVOL2	65	37.647

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000000229	-	88	56.989	ENSG00000198482	ZNF808	86	56.989	Homo_sapiens
ENSSPUG00000000229	-	88	58.298	ENSAMEG00000014454	-	99	56.506	Ailuropoda_melanoleuca
ENSSPUG00000000229	-	87	50.725	ENSACIG00000015429	-	79	50.725	Amphilophus_citrinellus
ENSSPUG00000000229	-	88	55.515	ENSACAG00000013039	-	99	55.515	Anolis_carolinensis
ENSSPUG00000000229	-	88	56.343	ENSACAG00000029487	-	73	56.343	Anolis_carolinensis
ENSSPUG00000000229	-	88	51.311	ENSACAG00000025611	-	66	51.273	Anolis_carolinensis
ENSSPUG00000000229	-	93	46.237	ENSACLG00000017576	-	89	53.061	Astatotilapia_calliptera
ENSSPUG00000000229	-	97	53.548	ENSACLG00000019318	-	97	51.504	Astatotilapia_calliptera
ENSSPUG00000000229	-	94	60.784	ENSAMXG00000033500	-	96	60.784	Astyanax_mexicanus
ENSSPUG00000000229	-	88	58.394	ENSAMXG00000031900	-	95	58.394	Astyanax_mexicanus
ENSSPUG00000000229	-	88	53.232	ENSAMXG00000042938	-	86	54.545	Astyanax_mexicanus
ENSSPUG00000000229	-	88	56.934	ENSAMXG00000036762	-	98	57.090	Astyanax_mexicanus
ENSSPUG00000000229	-	90	56.569	ENSAMXG00000025965	-	96	57.621	Astyanax_mexicanus
ENSSPUG00000000229	-	88	57.000	ENSAMXG00000029828	-	95	57.000	Astyanax_mexicanus
ENSSPUG00000000229	-	88	52.612	ENSAMXG00000038280	-	91	52.788	Astyanax_mexicanus
ENSSPUG00000000229	-	88	54.613	ENSAMXG00000031496	-	87	55.019	Astyanax_mexicanus
ENSSPUG00000000229	-	88	53.182	ENSAMXG00000030530	-	98	52.609	Astyanax_mexicanus
ENSSPUG00000000229	-	88	56.098	ENSAMXG00000037717	-	97	56.098	Astyanax_mexicanus
ENSSPUG00000000229	-	88	50.000	ENSAMXG00000009563	-	93	51.504	Astyanax_mexicanus
ENSSPUG00000000229	-	88	58.498	ENSAMXG00000018161	-	96	58.498	Astyanax_mexicanus
ENSSPUG00000000229	-	88	56.164	ENSAMXG00000041721	-	70	56.164	Astyanax_mexicanus
ENSSPUG00000000229	-	88	55.959	ENSAMXG00000041861	-	86	55.959	Astyanax_mexicanus
ENSSPUG00000000229	-	88	57.143	ENSAMXG00000012604	-	96	57.143	Astyanax_mexicanus
ENSSPUG00000000229	-	88	52.747	ENSBTAG00000050322	-	76	52.747	Bos_taurus
ENSSPUG00000000229	-	88	54.737	ENSBTAG00000030470	-	73	54.737	Bos_taurus
ENSSPUG00000000229	-	93	54.380	ENSCHIG00000020931	-	88	55.224	Capra_hircus
ENSSPUG00000000229	-	88	54.839	ENSCATG00000036940	ZNF808	77	53.506	Cercocebus_atys
ENSSPUG00000000229	-	88	53.763	ENSCSAG00000001974	ZNF808	82	53.506	Chlorocebus_sabaeus
ENSSPUG00000000229	-	97	58.909	ENSCPBG00000003130	-	98	57.087	Chrysemys_picta_bellii
ENSSPUG00000000229	-	91	60.000	ENSCPBG00000015500	-	90	60.000	Chrysemys_picta_bellii
ENSSPUG00000000229	-	88	60.526	ENSCPBG00000017489	-	91	60.526	Chrysemys_picta_bellii
ENSSPUG00000000229	-	92	58.955	ENSCPBG00000003774	-	90	58.955	Chrysemys_picta_bellii
ENSSPUG00000000229	-	91	39.044	ENSCING00000024509	-	97	39.044	Ciona_intestinalis
ENSSPUG00000000229	-	96	51.613	ENSCSAVG00000009583	-	100	48.496	Ciona_savignyi
ENSSPUG00000000229	-	97	48.315	ENSCSAVG00000000649	-	99	48.669	Ciona_savignyi
ENSSPUG00000000229	-	87	51.020	ENSCSAVG00000000642	-	100	51.020	Ciona_savignyi
ENSSPUG00000000229	-	88	53.763	ENSCANG00000019002	ZNF808	80	53.532	Colobus_angolensis_palliatus
ENSSPUG00000000229	-	93	50.000	ENSCGRG00001011966	Zfp715	68	50.000	Cricetulus_griseus_chok1gshd
ENSSPUG00000000229	-	94	50.373	ENSCGRG00001012523	-	89	50.373	Cricetulus_griseus_chok1gshd
ENSSPUG00000000229	-	93	50.000	ENSCGRG00000013626	Zfp715	65	50.000	Cricetulus_griseus_crigri
ENSSPUG00000000229	-	95	54.613	ENSEBUG00000014648	-	78	54.613	Eptatretus_burgeri
ENSSPUG00000000229	-	92	48.289	ENSEBUG00000005012	-	59	48.289	Eptatretus_burgeri
ENSSPUG00000000229	-	88	54.774	ENSEBUG00000003455	-	77	52.364	Eptatretus_burgeri
ENSSPUG00000000229	-	87	52.288	ENSEBUG00000010472	-	75	49.049	Eptatretus_burgeri
ENSSPUG00000000229	-	88	49.333	ENSEBUG00000006249	-	84	48.908	Eptatretus_burgeri
ENSSPUG00000000229	-	87	53.933	ENSEBUG00000008903	-	82	53.933	Eptatretus_burgeri
ENSSPUG00000000229	-	87	51.087	ENSEBUG00000009909	-	82	51.087	Eptatretus_burgeri
ENSSPUG00000000229	-	88	52.632	ENSEBUG00000005703	-	85	52.632	Eptatretus_burgeri
ENSSPUG00000000229	-	91	52.222	ENSEBUG00000014597	-	84	52.222	Eptatretus_burgeri
ENSSPUG00000000229	-	89	52.874	ENSEBUG00000001972	-	72	52.874	Eptatretus_burgeri
ENSSPUG00000000229	-	87	48.540	ENSEBUG00000006987	-	96	48.540	Eptatretus_burgeri
ENSSPUG00000000229	-	93	43.015	ENSEBUG00000003078	-	71	43.609	Eptatretus_burgeri
ENSSPUG00000000229	-	88	42.857	ENSEBUG00000006129	-	82	42.857	Eptatretus_burgeri
ENSSPUG00000000229	-	89	50.000	ENSGAFG00000017066	-	64	50.000	Gambusia_affinis
ENSSPUG00000000229	-	88	56.506	ENSGAGG00000001469	-	91	56.506	Gopherus_agassizii
ENSSPUG00000000229	-	88	56.554	ENSGAGG00000002828	-	69	56.554	Gopherus_agassizii
ENSSPUG00000000229	-	88	61.194	ENSGAGG00000006323	-	95	59.108	Gopherus_agassizii
ENSSPUG00000000229	-	87	44.330	ENSGAGG00000017094	-	52	45.745	Gopherus_agassizii
ENSSPUG00000000229	-	93	57.407	ENSGAGG00000014389	-	96	58.303	Gopherus_agassizii
ENSSPUG00000000229	-	88	58.065	ENSGGOG00000003352	ZNF808	80	58.065	Gorilla_gorilla
ENSSPUG00000000229	-	92	51.737	ENSHBUG00000001075	-	99	52.174	Haplochromis_burtoni
ENSSPUG00000000229	-	88	52.000	ENSLACG00000014708	-	64	53.333	Latimeria_chalumnae
ENSSPUG00000000229	-	88	54.839	ENSMFAG00000007422	ZNF808	79	53.506	Macaca_fascicularis
ENSSPUG00000000229	-	88	54.839	ENSMMUG00000012083	ZNF808	79	53.506	Macaca_mulatta
ENSSPUG00000000229	-	88	54.839	ENSMNEG00000043562	ZNF808	79	53.506	Macaca_nemestrina
ENSSPUG00000000229	-	88	53.650	ENSMLEG00000038043	ZNF808	68	53.731	Mandrillus_leucophaeus
ENSSPUG00000000229	-	87	51.634	ENSMZEG00005021865	-	94	51.634	Maylandia_zebra
ENSSPUG00000000229	-	100	48.485	ENSMZEG00005025012	-	100	48.023	Maylandia_zebra
ENSSPUG00000000229	-	92	53.476	ENSMICG00000042544	-	80	52.632	Microcebus_murinus
ENSSPUG00000000229	-	94	55.605	ENSMODG00000018622	-	98	55.605	Monodelphis_domestica
ENSSPUG00000000229	-	94	50.420	MGP_CAROLIEiJ_G0029427	-	93	50.420	Mus_caroli
ENSSPUG00000000229	-	93	51.136	MGP_CAROLIEiJ_G0029614	Zfp715	66	51.136	Mus_caroli
ENSSPUG00000000229	-	88	59.707	MGP_CAROLIEiJ_G0029490	Zfp420	97	59.707	Mus_caroli
ENSSPUG00000000229	-	91	51.046	MGP_CAROLIEiJ_G0021128	Zfp51	87	51.915	Mus_caroli
ENSSPUG00000000229	-	88	60.440	ENSMUSG00000058402	Zfp420	98	60.448	Mus_musculus
ENSSPUG00000000229	-	88	49.580	ENSMUSG00000070709	Zfp974	88	49.580	Mus_musculus
ENSSPUG00000000229	-	93	51.136	ENSMUSG00000012640	Zfp715	66	51.136	Mus_musculus
ENSSPUG00000000229	-	92	53.191	ENSMUSG00000023892	Zfp51	81	53.191	Mus_musculus
ENSSPUG00000000229	-	92	52.340	MGP_PahariEiJ_G0023447	Zfp51	87	52.340	Mus_pahari
ENSSPUG00000000229	-	88	53.521	MGP_PahariEiJ_G0012663	-	78	53.521	Mus_pahari
ENSSPUG00000000229	-	88	60.806	MGP_PahariEiJ_G0012724	Zfp420	98	60.821	Mus_pahari
ENSSPUG00000000229	-	88	52.101	MGP_SPRETEiJ_G0030526	-	92	49.618	Mus_spretus
ENSSPUG00000000229	-	88	48.529	MGP_SPRETEiJ_G0030525	-	83	48.529	Mus_spretus
ENSSPUG00000000229	-	93	51.136	MGP_SPRETEiJ_G0030713	Zfp715	66	51.136	Mus_spretus
ENSSPUG00000000229	-	88	60.440	MGP_SPRETEiJ_G0030586	Zfp420	98	60.448	Mus_spretus
ENSSPUG00000000229	-	88	57.143	ENSMLUG00000009276	-	86	57.143	Myotis_lucifugus
ENSSPUG00000000229	-	90	54.982	ENSMLUG00000015757	-	98	54.982	Myotis_lucifugus
ENSSPUG00000000229	-	88	59.140	ENSNLEG00000006042	ZNF808	76	59.140	Nomascus_leucogenys
ENSSPUG00000000229	-	87	50.532	ENSONIG00000007396	-	99	50.532	Oreochromis_niloticus
ENSSPUG00000000229	-	91	45.755	ENSONIG00000016979	-	99	46.067	Oreochromis_niloticus
ENSSPUG00000000229	-	88	52.239	ENSORLG00000011040	-	87	52.239	Oryzias_latipes
ENSSPUG00000000229	-	87	44.712	ENSOMEG00000018871	-	61	44.712	Oryzias_melastigma
ENSSPUG00000000229	-	88	48.540	ENSOMEG00000001622	-	84	48.540	Oryzias_melastigma
ENSSPUG00000000229	-	91	53.358	ENSOARG00000002896	-	92	53.114	Ovis_aries
ENSSPUG00000000229	-	88	58.065	ENSPPAG00000038086	ZNF808	80	58.065	Pan_paniscus
ENSSPUG00000000229	-	97	53.358	ENSPANG00000011361	ZNF808	81	53.506	Papio_anubis
ENSSPUG00000000229	-	88	49.306	ENSPSIG00000008588	-	100	49.421	Pelodiscus_sinensis
ENSSPUG00000000229	-	88	54.779	ENSPSIG00000009603	-	99	55.263	Pelodiscus_sinensis
ENSSPUG00000000229	-	88	51.866	ENSPEMG00000000548	-	84	51.866	Peromyscus_maniculatus_bairdii
ENSSPUG00000000229	-	88	57.914	ENSPCIG00000018929	-	91	57.762	Phascolarctos_cinereus
ENSSPUG00000000229	-	93	45.064	ENSPLAG00000014660	-	80	49.356	Poecilia_latipinna
ENSSPUG00000000229	-	87	42.748	ENSPREG00000008826	-	88	42.748	Poecilia_reticulata
ENSSPUG00000000229	-	88	58.065	ENSPPYG00000029644	ZNF808	80	58.065	Pongo_abelii
ENSSPUG00000000229	-	88	56.604	ENSPVAG00000009433	-	99	56.604	Pteropus_vampyrus
ENSSPUG00000000229	-	88	62.687	ENSPNAG00000012495	-	81	62.687	Pygocentrus_nattereri
ENSSPUG00000000229	-	88	56.471	ENSPNAG00000006039	-	86	56.471	Pygocentrus_nattereri
ENSSPUG00000000229	-	88	51.943	ENSPNAG00000002244	-	85	52.113	Pygocentrus_nattereri
ENSSPUG00000000229	-	88	56.569	ENSPNAG00000005829	-	97	57.249	Pygocentrus_nattereri
ENSSPUG00000000229	-	88	57.676	ENSPNAG00000012154	-	85	58.403	Pygocentrus_nattereri
ENSSPUG00000000229	-	90	58.303	ENSPNAG00000021831	-	95	58.955	Pygocentrus_nattereri
ENSSPUG00000000229	-	88	57.249	ENSPNAG00000016478	-	99	57.249	Pygocentrus_nattereri
ENSSPUG00000000229	-	92	51.673	ENSRNOG00000043341	Zfp51	90	51.673	Rattus_norvegicus
ENSSPUG00000000229	-	91	56.343	ENSRBIG00000032168	-	81	56.343	Rhinopithecus_bieti
ENSSPUG00000000229	-	88	54.839	ENSRROG00000009467	ZNF808	80	53.903	Rhinopithecus_roxellana
ENSSPUG00000000229	-	94	53.558	ENSSHAG00000003090	-	89	54.198	Sarcophilus_harrisii
ENSSPUG00000000229	-	91	38.846	ENSSLDG00000016301	-	92	39.427	Seriola_lalandi_dorsalis
ENSSPUG00000000229	-	93	53.285	ENSTGUG00000014079	-	100	53.875	Taeniopygia_guttata
ENSSPUG00000000229	-	88	42.125	ENSTNIG00000005023	-	100	42.085	Tetraodon_nigroviridis
ENSSPUG00000000229	-	87	38.843	ENSTNIG00000008100	-	100	41.714	Tetraodon_nigroviridis
ENSSPUG00000000229	-	90	52.174	ENSTBEG00000016262	-	100	47.727	Tupaia_belangeri
ENSSPUG00000000229	-	97	53.333	ENSUMAG00000024602	-	90	57.377	Ursus_maritimus
ENSSPUG00000000229	-	97	52.852	ENSXETG00000016781	-	100	53.846	Xenopus_tropicalis