EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000000410 (Gene tree)
Gene ID: -
Gene Symbol: SF3B1
Alias: Hsh155|PRPF10|Prp10|SAP155|SF3b155
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 65792 bases
Position: chrQEPC01009281.1:2544736-2610527
Accession: 10768
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000000437	SF3b1	PF08920.10	8.8e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000000472	SF3B1-201	3965	-	ENSSPUP00000000437	1301 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000000410's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000000410's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000000410	SF3B1	100	99.080	ENSG00000115524	SF3B1	100	100.000	Homo_sapiens
ENSSPUG00000000410	SF3B1	100	93.460	ENSAPOG00000011894	sf3b1	100	93.460	Acanthochromis_polyacanthus
ENSSPUG00000000410	SF3B1	99	98.997	ENSAMEG00000013809	SF3B1	99	98.997	Ailuropoda_melanoleuca
ENSSPUG00000000410	SF3B1	100	92.977	ENSACIG00000020910	sf3b1	97	92.977	Amphilophus_citrinellus
ENSSPUG00000000410	SF3B1	100	93.460	ENSAOCG00000004478	sf3b1	100	93.460	Amphiprion_ocellaris
ENSSPUG00000000410	SF3B1	100	93.460	ENSAPEG00000012937	sf3b1	100	93.460	Amphiprion_percula
ENSSPUG00000000410	SF3B1	100	93.760	ENSATEG00000020435	sf3b1	100	93.760	Anabas_testudineus
ENSSPUG00000000410	SF3B1	99	99.381	ENSAPLG00000003993	SF3B1	99	99.381	Anas_platyrhynchos
ENSSPUG00000000410	SF3B1	100	99.002	ENSACAG00000009612	SF3B1	100	99.002	Anolis_carolinensis
ENSSPUG00000000410	SF3B1	100	99.080	ENSANAG00000021577	SF3B1	100	99.223	Aotus_nancymaae
ENSSPUG00000000410	SF3B1	100	92.618	ENSACLG00000023470	sf3b1	100	92.618	Astatotilapia_calliptera
ENSSPUG00000000410	SF3B1	100	93.916	ENSAMXG00000002219	sf3b1	100	93.916	Astyanax_mexicanus
ENSSPUG00000000410	SF3B1	100	99.003	ENSBTAG00000008915	SF3B1	100	99.003	Bos_taurus
ENSSPUG00000000410	SF3B1	98	66.239	WBGene00011605	sftb-1	98	66.239	Caenorhabditis_elegans
ENSSPUG00000000410	SF3B1	100	99.080	ENSCJAG00000003902	SF3B1	100	99.080	Callithrix_jacchus
ENSSPUG00000000410	SF3B1	100	99.080	ENSCAFG00000010826	SF3B1	100	99.080	Canis_familiaris
ENSSPUG00000000410	SF3B1	100	99.080	ENSCAFG00020004750	SF3B1	100	99.080	Canis_lupus_dingo
ENSSPUG00000000410	SF3B1	100	99.003	ENSCHIG00000015226	SF3B1	100	99.003	Capra_hircus
ENSSPUG00000000410	SF3B1	100	99.003	ENSTSYG00000009214	SF3B1	100	99.003	Carlito_syrichta
ENSSPUG00000000410	SF3B1	99	98.923	ENSCAPG00000006547	SF3B1	99	98.923	Cavia_aperea
ENSSPUG00000000410	SF3B1	99	99.073	ENSCPOG00000009353	SF3B1	100	99.073	Cavia_porcellus
ENSSPUG00000000410	SF3B1	100	99.080	ENSCCAG00000020506	SF3B1	100	99.080	Cebus_capucinus
ENSSPUG00000000410	SF3B1	100	99.080	ENSCATG00000035735	SF3B1	100	99.080	Cercocebus_atys
ENSSPUG00000000410	SF3B1	99	99.073	ENSCLAG00000014767	SF3B1	99	99.073	Chinchilla_lanigera
ENSSPUG00000000410	SF3B1	100	99.080	ENSCSAG00000011505	SF3B1	100	99.080	Chlorocebus_sabaeus
ENSSPUG00000000410	SF3B1	76	98.462	ENSCHOG00000009860	SF3B1	76	98.438	Choloepus_hoffmanni
ENSSPUG00000000410	SF3B1	100	99.539	ENSCPBG00000021902	SF3B1	100	99.539	Chrysemys_picta_bellii
ENSSPUG00000000410	SF3B1	68	77.839	ENSCING00000002558	-	99	78.532	Ciona_intestinalis
ENSSPUG00000000410	SF3B1	99	79.682	ENSCSAVG00000002559	-	99	79.378	Ciona_savignyi
ENSSPUG00000000410	SF3B1	100	99.080	ENSCANG00000029415	SF3B1	100	99.080	Colobus_angolensis_palliatus
ENSSPUG00000000410	SF3B1	100	99.080	ENSCGRG00001016990	Sf3b1	100	99.080	Cricetulus_griseus_chok1gshd
ENSSPUG00000000410	SF3B1	100	99.080	ENSCGRG00000005301	Sf3b1	100	99.080	Cricetulus_griseus_crigri
ENSSPUG00000000410	SF3B1	100	89.847	ENSCSEG00000003860	sf3b1	100	89.847	Cynoglossus_semilaevis
ENSSPUG00000000410	SF3B1	96	93.587	ENSCVAG00000003680	sf3b1	99	93.587	Cyprinodon_variegatus
ENSSPUG00000000410	SF3B1	100	93.612	ENSDARG00000056138	sf3b1	100	93.612	Danio_rerio
ENSSPUG00000000410	SF3B1	100	99.004	ENSDNOG00000011754	SF3B1	100	99.004	Dasypus_novemcinctus
ENSSPUG00000000410	SF3B1	99	96.522	ENSDORG00000002399	Sf3b1	100	96.522	Dipodomys_ordii
ENSSPUG00000000410	SF3B1	100	76.436	FBgn0031266	Sf3b1	100	76.436	Drosophila_melanogaster
ENSSPUG00000000410	SF3B1	83	98.330	ENSETEG00000009188	SF3B1	100	98.330	Echinops_telfairi
ENSSPUG00000000410	SF3B1	99	87.385	ENSEBUG00000004325	sf3b1	100	89.826	Eptatretus_burgeri
ENSSPUG00000000410	SF3B1	100	99.080	ENSEASG00005020159	SF3B1	98	99.080	Equus_asinus_asinus
ENSSPUG00000000410	SF3B1	100	99.080	ENSECAG00000021657	SF3B1	98	99.080	Equus_caballus
ENSSPUG00000000410	SF3B1	81	99.712	ENSEEUG00000000836	SF3B1	81	99.712	Erinaceus_europaeus
ENSSPUG00000000410	SF3B1	100	92.674	ENSELUG00000005977	sf3b1	98	92.900	Esox_lucius
ENSSPUG00000000410	SF3B1	100	99.080	ENSFCAG00000005038	SF3B1	100	99.080	Felis_catus
ENSSPUG00000000410	SF3B1	99	99.303	ENSFALG00000004281	SF3B1	99	99.303	Ficedula_albicollis
ENSSPUG00000000410	SF3B1	100	99.080	ENSFDAG00000017510	SF3B1	100	99.080	Fukomys_damarensis
ENSSPUG00000000410	SF3B1	100	92.624	ENSFHEG00000014333	sf3b1	100	92.624	Fundulus_heteroclitus
ENSSPUG00000000410	SF3B1	100	93.445	ENSGMOG00000006773	sf3b1	100	93.445	Gadus_morhua
ENSSPUG00000000410	SF3B1	100	99.385	ENSGALG00000008038	SF3B1	100	99.385	Gallus_gallus
ENSSPUG00000000410	SF3B1	100	91.902	ENSGAFG00000000704	sf3b1	99	93.431	Gambusia_affinis
ENSSPUG00000000410	SF3B1	100	92.988	ENSGACG00000008839	sf3b1	100	93.445	Gasterosteus_aculeatus
ENSSPUG00000000410	SF3B1	100	98.855	ENSGAGG00000017478	SF3B1	100	98.855	Gopherus_agassizii
ENSSPUG00000000410	SF3B1	99	92.172	ENSGGOG00000009264	SF3B1	99	93.457	Gorilla_gorilla
ENSSPUG00000000410	SF3B1	99	92.683	ENSHBUG00000007705	sf3b1	99	92.683	Haplochromis_burtoni
ENSSPUG00000000410	SF3B1	99	99.073	ENSHGLG00000008285	-	99	99.073	Heterocephalus_glaber_female
ENSSPUG00000000410	SF3B1	99	97.066	ENSHGLG00100005535	-	99	97.066	Heterocephalus_glaber_male
ENSSPUG00000000410	SF3B1	100	92.738	ENSHCOG00000016775	sf3b1	100	92.814	Hippocampus_comes
ENSSPUG00000000410	SF3B1	100	94.064	ENSIPUG00000013171	sf3b1	100	94.064	Ictalurus_punctatus
ENSSPUG00000000410	SF3B1	100	99.080	ENSSTOG00000011034	SF3B1	100	99.080	Ictidomys_tridecemlineatus
ENSSPUG00000000410	SF3B1	99	98.992	ENSJJAG00000010903	Sf3b1	99	98.992	Jaculus_jaculus
ENSSPUG00000000410	SF3B1	100	92.792	ENSKMAG00000004009	sf3b1	100	92.868	Kryptolebias_marmoratus
ENSSPUG00000000410	SF3B1	100	93.578	ENSLBEG00000022208	sf3b1	100	93.578	Labrus_bergylta
ENSSPUG00000000410	SF3B1	99	92.408	ENSLACG00000014832	SF3B1	99	92.331	Latimeria_chalumnae
ENSSPUG00000000410	SF3B1	100	94.837	ENSLOCG00000003899	sf3b1	100	94.837	Lepisosteus_oculatus
ENSSPUG00000000410	SF3B1	100	99.080	ENSLAFG00000001956	SF3B1	100	99.080	Loxodonta_africana
ENSSPUG00000000410	SF3B1	99	99.073	ENSMMUG00000022430	SF3B1	99	99.073	Macaca_mulatta
ENSSPUG00000000410	SF3B1	100	99.080	ENSMNEG00000042333	SF3B1	100	99.223	Macaca_nemestrina
ENSSPUG00000000410	SF3B1	94	92.851	ENSMLEG00000026141	SF3B1	99	93.065	Mandrillus_leucophaeus
ENSSPUG00000000410	SF3B1	100	93.683	ENSMAMG00000010241	sf3b1	100	93.683	Mastacembelus_armatus
ENSSPUG00000000410	SF3B1	100	92.618	ENSMZEG00005021254	sf3b1	100	92.618	Maylandia_zebra
ENSSPUG00000000410	SF3B1	99	98.762	ENSMGAG00000007017	SF3B1	99	98.762	Meleagris_gallopavo
ENSSPUG00000000410	SF3B1	99	94.749	ENSMAUG00000009071	Sf3b1	99	94.903	Mesocricetus_auratus
ENSSPUG00000000410	SF3B1	100	99.003	ENSMICG00000013879	SF3B1	100	99.003	Microcebus_murinus
ENSSPUG00000000410	SF3B1	99	94.599	ENSMOCG00000000455	Sf3b1	99	94.599	Microtus_ochrogaster
ENSSPUG00000000410	SF3B1	83	93.047	ENSMMOG00000000475	sf3b1	100	93.047	Mola_mola
ENSSPUG00000000410	SF3B1	100	98.849	ENSMODG00000012275	SF3B1	100	98.849	Monodelphis_domestica
ENSSPUG00000000410	SF3B1	100	93.607	ENSMALG00000017211	sf3b1	100	93.607	Monopterus_albus
ENSSPUG00000000410	SF3B1	100	99.080	MGP_CAROLIEiJ_G0014141	Sf3b1	100	99.080	Mus_caroli
ENSSPUG00000000410	SF3B1	100	99.080	ENSMUSG00000025982	Sf3b1	100	99.080	Mus_musculus
ENSSPUG00000000410	SF3B1	100	99.080	MGP_SPRETEiJ_G0014947	Sf3b1	100	99.080	Mus_spretus
ENSSPUG00000000410	SF3B1	100	99.080	ENSMPUG00000007799	SF3B1	100	99.080	Mustela_putorius_furo
ENSSPUG00000000410	SF3B1	100	97.853	ENSMLUG00000000840	SF3B1	100	97.853	Myotis_lucifugus
ENSSPUG00000000410	SF3B1	99	98.769	ENSNGAG00000021884	-	100	98.769	Nannospalax_galili
ENSSPUG00000000410	SF3B1	100	88.863	ENSNBRG00000015816	sf3b1	100	88.863	Neolamprologus_brichardi
ENSSPUG00000000410	SF3B1	100	99.080	ENSNLEG00000006861	SF3B1	100	99.080	Nomascus_leucogenys
ENSSPUG00000000410	SF3B1	64	100.000	ENSMEUG00000015848	-	67	100.000	Notamacropus_eugenii
ENSSPUG00000000410	SF3B1	100	85.953	ENSOPRG00000008596	SF3B1	100	85.953	Ochotona_princeps
ENSSPUG00000000410	SF3B1	100	99.080	ENSODEG00000011153	-	100	99.080	Octodon_degus
ENSSPUG00000000410	SF3B1	100	92.618	ENSONIG00000013758	sf3b1	100	92.618	Oreochromis_niloticus
ENSSPUG00000000410	SF3B1	86	98.524	ENSOCUG00000012722	-	96	98.524	Oryctolagus_cuniculus
ENSSPUG00000000410	SF3B1	100	93.303	ENSORLG00000020219	sf3b1	100	93.303	Oryzias_latipes
ENSSPUG00000000410	SF3B1	100	93.303	ENSORLG00020001746	sf3b1	100	93.303	Oryzias_latipes_hni
ENSSPUG00000000410	SF3B1	64	91.050	ENSORLG00015001759	sf3b1	98	91.050	Oryzias_latipes_hsok
ENSSPUG00000000410	SF3B1	100	93.460	ENSOMEG00000019231	sf3b1	100	93.460	Oryzias_melastigma
ENSSPUG00000000410	SF3B1	100	99.003	ENSOARG00000015374	SF3B1	100	99.003	Ovis_aries
ENSSPUG00000000410	SF3B1	100	99.080	ENSPPAG00000035007	SF3B1	100	99.080	Pan_paniscus
ENSSPUG00000000410	SF3B1	100	99.080	ENSPPRG00000009090	SF3B1	100	99.080	Panthera_pardus
ENSSPUG00000000410	SF3B1	100	99.080	ENSPTIG00000021557	SF3B1	100	99.080	Panthera_tigris_altaica
ENSSPUG00000000410	SF3B1	99	90.377	ENSPTRG00000012771	SF3B1	99	90.531	Pan_troglodytes
ENSSPUG00000000410	SF3B1	100	99.080	ENSPANG00000013417	SF3B1	100	99.080	Papio_anubis
ENSSPUG00000000410	SF3B1	100	94.897	ENSPKIG00000000784	sf3b1	100	94.897	Paramormyrops_kingsleyae
ENSSPUG00000000410	SF3B1	99	98.296	ENSPSIG00000017222	SF3B1	98	98.296	Pelodiscus_sinensis
ENSSPUG00000000410	SF3B1	90	93.755	ENSPMGG00000004330	sf3b1	99	93.755	Periophthalmus_magnuspinnatus
ENSSPUG00000000410	SF3B1	99	99.073	ENSPEMG00000010699	Sf3b1	100	99.073	Peromyscus_maniculatus_bairdii
ENSSPUG00000000410	SF3B1	100	89.954	ENSPMAG00000001311	sf3b1	100	90.107	Petromyzon_marinus
ENSSPUG00000000410	SF3B1	100	98.772	ENSPCIG00000010642	SF3B1	100	98.772	Phascolarctos_cinereus
ENSSPUG00000000410	SF3B1	100	93.313	ENSPFOG00000000073	sf3b1	100	93.313	Poecilia_formosa
ENSSPUG00000000410	SF3B1	100	93.384	ENSPLAG00000002293	sf3b1	100	93.384	Poecilia_latipinna
ENSSPUG00000000410	SF3B1	100	93.384	ENSPMEG00000000446	sf3b1	98	93.384	Poecilia_mexicana
ENSSPUG00000000410	SF3B1	100	93.460	ENSPREG00000019652	sf3b1	100	93.460	Poecilia_reticulata
ENSSPUG00000000410	SF3B1	100	98.358	ENSPPYG00000013044	SF3B1	100	98.358	Pongo_abelii
ENSSPUG00000000410	SF3B1	100	98.926	ENSPCAG00000009292	SF3B1	100	98.926	Procavia_capensis
ENSSPUG00000000410	SF3B1	100	99.003	ENSPCOG00000024074	SF3B1	100	99.003	Propithecus_coquereli
ENSSPUG00000000410	SF3B1	100	99.080	ENSPVAG00000008302	SF3B1	100	99.080	Pteropus_vampyrus
ENSSPUG00000000410	SF3B1	100	92.542	ENSPNYG00000014939	sf3b1	100	92.542	Pundamilia_nyererei
ENSSPUG00000000410	SF3B1	100	93.840	ENSPNAG00000008288	sf3b1	100	93.916	Pygocentrus_nattereri
ENSSPUG00000000410	SF3B1	100	99.080	ENSRNOG00000013516	Sf3b1	100	99.080	Rattus_norvegicus
ENSSPUG00000000410	SF3B1	99	95.315	ENSRBIG00000026096	SF3B1	100	95.315	Rhinopithecus_bieti
ENSSPUG00000000410	SF3B1	100	99.080	ENSRROG00000031308	SF3B1	100	99.080	Rhinopithecus_roxellana
ENSSPUG00000000410	SF3B1	100	99.080	ENSSBOG00000020080	SF3B1	100	99.080	Saimiri_boliviensis_boliviensis
ENSSPUG00000000410	SF3B1	100	98.849	ENSSHAG00000017564	SF3B1	100	98.849	Sarcophilus_harrisii
ENSSPUG00000000410	SF3B1	100	94.677	ENSSFOG00015021535	sf3b1	100	94.905	Scleropages_formosus
ENSSPUG00000000410	SF3B1	99	92.868	ENSSMAG00000013977	sf3b1	99	92.944	Scophthalmus_maximus
ENSSPUG00000000410	SF3B1	100	93.455	ENSSDUG00000017422	sf3b1	100	93.455	Seriola_dumerili
ENSSPUG00000000410	SF3B1	100	93.379	ENSSLDG00000019495	sf3b1	100	93.379	Seriola_lalandi_dorsalis
ENSSPUG00000000410	SF3B1	76	99.648	ENSSARG00000007016	SF3B1	76	99.648	Sorex_araneus
ENSSPUG00000000410	SF3B1	100	93.607	ENSSPAG00000010451	sf3b1	99	93.607	Stegastes_partitus
ENSSPUG00000000410	SF3B1	91	98.654	ENSSSCG00000016075	SF3B1	100	99.223	Sus_scrofa
ENSSPUG00000000410	SF3B1	100	99.308	ENSTGUG00000010553	SF3B1	100	99.308	Taeniopygia_guttata
ENSSPUG00000000410	SF3B1	100	93.455	ENSTRUG00000015534	sf3b1	100	93.455	Takifugu_rubripes
ENSSPUG00000000410	SF3B1	88	99.380	ENSTBEG00000008714	SF3B1	93	99.380	Tupaia_belangeri
ENSSPUG00000000410	SF3B1	92	93.805	ENSTTRG00000003414	SF3B1	92	93.805	Tursiops_truncatus
ENSSPUG00000000410	SF3B1	94	93.864	ENSUAMG00000018506	SF3B1	99	98.785	Ursus_americanus
ENSSPUG00000000410	SF3B1	100	99.080	ENSUMAG00000020945	SF3B1	100	99.080	Ursus_maritimus
ENSSPUG00000000410	SF3B1	96	96.847	ENSVPAG00000005798	SF3B1	96	96.847	Vicugna_pacos
ENSSPUG00000000410	SF3B1	100	99.080	ENSVVUG00000025948	SF3B1	95	99.080	Vulpes_vulpes
ENSSPUG00000000410	SF3B1	100	96.396	ENSXETG00000013339	sf3b1	100	96.396	Xenopus_tropicalis
ENSSPUG00000000410	SF3B1	100	89.969	ENSXCOG00000018086	sf3b1	100	89.855	Xiphophorus_couchianus
ENSSPUG00000000410	SF3B1	100	93.460	ENSXMAG00000007369	sf3b1	100	93.683	Xiphophorus_maculatus