EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000000489 (Gene tree)
Gene ID: -
Gene Symbol: RBM23
Alias: CAPERbeta|FLJ10482|RNPC4
Full Name: RNA binding motif protein 23
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 11880 bases
Position: chrQEPC01009531.1:2049402-2061281
Accession: 20155
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000000552	RRM_1	PF00076.22	1.8e-31	1	2
ENSSPUP00000000552	RRM_1	PF00076.22	1.8e-31	2	2
ENSSPUP00000000538	RRM_1	PF00076.22	2e-31	1	2
ENSSPUP00000000538	RRM_1	PF00076.22	2e-31	2	2
ENSSPUP00000000542	RRM_1	PF00076.22	2e-31	1	2
ENSSPUP00000000542	RRM_1	PF00076.22	2e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000000577	RBM23-201	2277	-	ENSSPUP00000000538	454 (aa)	-	-
ENSSPUT00000000581	RBM23-202	2825	-	ENSSPUP00000000542	454 (aa)	-	-
ENSSPUT00000000591	RBM23-203	2777	-	ENSSPUP00000000552	438 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000000489's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000000489's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000000489	RBM23	55	36.207	ENSSPUG00000006680	DAZAP1	61	36.207
ENSSPUG00000000489	RBM23	59	63.469	ENSSPUG00000012393	RBM39	73	63.469
ENSSPUG00000000489	RBM23	50	36.145	ENSSPUG00000015430	RBM34	50	34.831

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000000489	RBM23	96	71.460	ENSG00000100461	RBM23	100	100.000	Homo_sapiens
ENSSPUG00000000489	RBM23	71	79.755	ENSAMEG00000007322	RBM23	72	79.635	Ailuropoda_melanoleuca
ENSSPUG00000000489	RBM23	71	90.221	ENSACAG00000001569	RBM23	68	90.536	Anolis_carolinensis
ENSSPUG00000000489	RBM23	96	57.820	ENSANAG00000033790	-	73	68.051	Aotus_nancymaae
ENSSPUG00000000489	RBM23	96	68.085	ENSBTAG00000038333	RBM23	70	79.635	Bos_taurus
ENSSPUG00000000489	RBM23	96	69.111	ENSCJAG00000008482	RBM23	100	67.281	Callithrix_jacchus
ENSSPUG00000000489	RBM23	71	75.851	ENSCAFG00000011217	RBM23	74	75.077	Canis_familiaris
ENSSPUG00000000489	RBM23	71	80.745	ENSCAFG00020007711	RBM23	72	80.864	Canis_lupus_dingo
ENSSPUG00000000489	RBM23	96	67.872	ENSCHIG00000025709	RBM23	70	79.027	Capra_hircus
ENSSPUG00000000489	RBM23	96	69.438	ENSTSYG00000014755	RBM23	100	81.949	Carlito_syrichta
ENSSPUG00000000489	RBM23	96	62.329	ENSCCAG00000028584	-	100	71.587	Cebus_capucinus
ENSSPUG00000000489	RBM23	96	71.034	ENSCCAG00000025114	-	100	70.507	Cebus_capucinus
ENSSPUG00000000489	RBM23	96	72.477	ENSCATG00000017832	RBM23	100	79.298	Cercocebus_atys
ENSSPUG00000000489	RBM23	96	69.011	ENSCSAG00000016213	RBM23	71	79.141	Chlorocebus_sabaeus
ENSSPUG00000000489	RBM23	100	77.778	ENSCPBG00000026096	RBM23	77	85.759	Chrysemys_picta_bellii
ENSSPUG00000000489	RBM23	76	77.971	ENSCANG00000001893	RBM23	78	80.000	Colobus_angolensis_palliatus
ENSSPUG00000000489	RBM23	96	72.235	ENSDNOG00000032457	RBM23	72	81.191	Dasypus_novemcinctus
ENSSPUG00000000489	RBM23	61	81.004	ENSDORG00000004926	-	100	81.004	Dipodomys_ordii
ENSSPUG00000000489	RBM23	67	54.422	ENSETEG00000017915	-	77	72.727	Echinops_telfairi
ENSSPUG00000000489	RBM23	90	66.176	ENSEASG00005011696	RBM23	97	65.025	Equus_asinus_asinus
ENSSPUG00000000489	RBM23	96	71.560	ENSECAG00000009910	RBM23	100	70.507	Equus_caballus
ENSSPUG00000000489	RBM23	96	68.958	ENSEEUG00000015560	RBM23	72	79.692	Erinaceus_europaeus
ENSSPUG00000000489	RBM23	71	80.435	ENSFCAG00000006632	RBM23	74	80.864	Felis_catus
ENSSPUG00000000489	RBM23	96	71.824	ENSGGOG00000015707	RBM23	74	80.805	Gorilla_gorilla
ENSSPUG00000000489	RBM23	96	66.143	ENSHGLG00100006114	RBM23	71	74.688	Heterocephalus_glaber_male
ENSSPUG00000000489	RBM23	61	81.655	ENSSTOG00000010354	RBM23	100	81.655	Ictidomys_tridecemlineatus
ENSSPUG00000000489	RBM23	96	70.776	ENSLAFG00000018567	RBM23	100	69.495	Loxodonta_africana
ENSSPUG00000000489	RBM23	96	72.374	ENSMFAG00000037595	RBM23	74	79.755	Macaca_fascicularis
ENSSPUG00000000489	RBM23	96	72.146	ENSMMUG00000018381	RBM23	74	79.755	Macaca_mulatta
ENSSPUG00000000489	RBM23	96	72.874	ENSMNEG00000042442	RBM23	74	80.495	Macaca_nemestrina
ENSSPUG00000000489	RBM23	96	69.773	ENSMLEG00000039954	RBM23	74	76.524	Mandrillus_leucophaeus
ENSSPUG00000000489	RBM23	96	71.622	ENSMICG00000006364	RBM23	100	82.117	Microcebus_murinus
ENSSPUG00000000489	RBM23	69	83.548	ENSMODG00000024448	RBM23	71	82.500	Monodelphis_domestica
ENSSPUG00000000489	RBM23	71	80.495	ENSMPUG00000007151	RBM23	72	80.615	Mustela_putorius_furo
ENSSPUG00000000489	RBM23	96	67.793	ENSMLUG00000012923	RBM23	72	76.398	Myotis_lucifugus
ENSSPUG00000000489	RBM23	96	71.233	ENSNLEG00000014792	RBM23	75	79.268	Nomascus_leucogenys
ENSSPUG00000000489	RBM23	54	90.511	ENSMEUG00000014548	-	53	90.511	Notamacropus_eugenii
ENSSPUG00000000489	RBM23	71	76.398	ENSOPRG00000001092	RBM23	72	76.398	Ochotona_princeps
ENSSPUG00000000489	RBM23	69	80.128	ENSOCUG00000002006	RBM23	72	78.638	Oryctolagus_cuniculus
ENSSPUG00000000489	RBM23	96	69.438	ENSOGAG00000014794	RBM23	76	78.443	Otolemur_garnettii
ENSSPUG00000000489	RBM23	96	65.957	ENSOARG00000019398	RBM23	70	78.116	Ovis_aries
ENSSPUG00000000489	RBM23	96	70.153	ENSPPAG00000037922	RBM23	75	79.573	Pan_paniscus
ENSSPUG00000000489	RBM23	71	80.435	ENSPPRG00000023344	RBM23	74	80.864	Panthera_pardus
ENSSPUG00000000489	RBM23	71	80.435	ENSPTIG00000007831	RBM23	75	80.864	Panthera_tigris_altaica
ENSSPUG00000000489	RBM23	96	71.689	ENSPTRG00000006151	RBM23	75	79.268	Pan_troglodytes
ENSSPUG00000000489	RBM23	76	77.810	ENSPANG00000001324	RBM23	100	80.496	Papio_anubis
ENSSPUG00000000489	RBM23	69	83.548	ENSPCIG00000027773	RBM23	70	82.759	Phascolarctos_cinereus
ENSSPUG00000000489	RBM23	71	79.938	ENSPPYG00000005649	RBM23	74	79.938	Pongo_abelii
ENSSPUG00000000489	RBM23	96	56.944	ENSPCAG00000006669	RBM23	72	65.273	Procavia_capensis
ENSSPUG00000000489	RBM23	96	71.588	ENSPCOG00000018564	RBM23	100	81.949	Propithecus_coquereli
ENSSPUG00000000489	RBM23	96	73.576	ENSPVAG00000013785	RBM23	72	83.596	Pteropus_vampyrus
ENSSPUG00000000489	RBM23	96	72.146	ENSRBIG00000039276	RBM23	74	79.448	Rhinopithecus_bieti
ENSSPUG00000000489	RBM23	96	72.146	ENSRROG00000044026	RBM23	74	79.448	Rhinopithecus_roxellana
ENSSPUG00000000489	RBM23	92	58.937	ENSSBOG00000034977	-	70	70.213	Saimiri_boliviensis_boliviensis
ENSSPUG00000000489	RBM23	96	73.986	ENSSBOG00000023037	-	100	59.242	Saimiri_boliviensis_boliviensis
ENSSPUG00000000489	RBM23	69	83.548	ENSSHAG00000012932	RBM23	70	82.500	Sarcophilus_harrisii
ENSSPUG00000000489	RBM23	71	78.704	ENSSARG00000005165	RBM23	72	78.834	Sorex_araneus
ENSSPUG00000000489	RBM23	96	69.248	ENSSSCG00000026700	RBM23	74	82.609	Sus_scrofa
ENSSPUG00000000489	RBM23	96	66.376	ENSTBEG00000011543	RBM23	70	75.684	Tupaia_belangeri
ENSSPUG00000000489	RBM23	96	71.011	ENSTTRG00000001500	RBM23	71	81.191	Tursiops_truncatus
ENSSPUG00000000489	RBM23	71	81.366	ENSUAMG00000008524	RBM23	72	81.481	Ursus_americanus
ENSSPUG00000000489	RBM23	71	81.366	ENSUMAG00000014075	RBM23	72	81.481	Ursus_maritimus
ENSSPUG00000000489	RBM23	71	80.745	ENSVVUG00000019815	RBM23	72	80.864	Vulpes_vulpes
ENSSPUG00000000489	RBM23	67	74.497	ENSXETG00000022623	rbm23	72	71.746	Xenopus_tropicalis