EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000000531 (Gene tree)
Gene ID: -
Gene Symbol: APEX1
Alias: APE|APE-1|APEN|APEX|APX|HAP1|REF-1|REF1
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 5621 bases
Position: chrQEPC01001840.1:245537-251157
Accession: 587
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000000604	Exo_endo_phos	PF03372.23	1.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000000644	APEX1-201	855	-	ENSSPUP00000000604	284 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000000531's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000000531's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000000531	APEX1	96	72.887	ENSG00000100823	APEX1	99	64.327	Homo_sapiens
ENSSPUG00000000531	APEX1	94	69.534	ENSAPOG00000017002	apex1	92	69.643	Acanthochromis_polyacanthus
ENSSPUG00000000531	APEX1	95	72.632	ENSAMEG00000005418	APEX1	90	72.632	Ailuropoda_melanoleuca
ENSSPUG00000000531	APEX1	93	72.826	ENSACIG00000010653	apex1	95	72.500	Amphilophus_citrinellus
ENSSPUG00000000531	APEX1	94	70.251	ENSAOCG00000009649	apex1	91	70.357	Amphiprion_ocellaris
ENSSPUG00000000531	APEX1	94	70.251	ENSAPEG00000021453	apex1	91	70.357	Amphiprion_percula
ENSSPUG00000000531	APEX1	93	73.723	ENSATEG00000002883	apex1	88	73.214	Anabas_testudineus
ENSSPUG00000000531	APEX1	94	79.928	ENSACAG00000008099	APEX1	92	77.816	Anolis_carolinensis
ENSSPUG00000000531	APEX1	96	72.887	ENSANAG00000030117	APEX1	89	72.887	Aotus_nancymaae
ENSSPUG00000000531	APEX1	93	73.723	ENSACLG00000018441	apex1	90	73.214	Astatotilapia_calliptera
ENSSPUG00000000531	APEX1	96	73.239	ENSAMXG00000034699	apex1	91	73.239	Astyanax_mexicanus
ENSSPUG00000000531	APEX1	95	71.930	ENSBTAG00000002745	APEX1	90	71.930	Bos_taurus
ENSSPUG00000000531	APEX1	85	43.529	WBGene00001372	exo-3	88	43.529	Caenorhabditis_elegans
ENSSPUG00000000531	APEX1	96	73.239	ENSCJAG00000009726	APEX1	89	73.239	Callithrix_jacchus
ENSSPUG00000000531	APEX1	95	73.239	ENSCAFG00000032033	APEX1	90	73.333	Canis_familiaris
ENSSPUG00000000531	APEX1	95	73.239	ENSCAFG00020014377	-	90	73.333	Canis_lupus_dingo
ENSSPUG00000000531	APEX1	95	71.930	ENSCHIG00000007298	-	90	71.930	Capra_hircus
ENSSPUG00000000531	APEX1	90	57.678	ENSCHIG00000014537	-	85	57.678	Capra_hircus
ENSSPUG00000000531	APEX1	96	71.479	ENSTSYG00000034813	APEX1	89	71.479	Carlito_syrichta
ENSSPUG00000000531	APEX1	91	65.934	ENSCAPG00000016235	APEX1	90	72.340	Cavia_aperea
ENSSPUG00000000531	APEX1	99	70.432	ENSCPOG00000030909	APEX1	95	70.432	Cavia_porcellus
ENSSPUG00000000531	APEX1	96	62.324	ENSCCAG00000031931	-	89	62.324	Cebus_capucinus
ENSSPUG00000000531	APEX1	96	73.239	ENSCCAG00000033056	-	89	73.239	Cebus_capucinus
ENSSPUG00000000531	APEX1	99	71.186	ENSCATG00000015580	APEX1	93	71.186	Cercocebus_atys
ENSSPUG00000000531	APEX1	99	71.429	ENSCLAG00000001002	APEX1	95	71.429	Chinchilla_lanigera
ENSSPUG00000000531	APEX1	99	71.525	ENSCSAG00000016670	-	93	71.525	Chlorocebus_sabaeus
ENSSPUG00000000531	APEX1	99	71.525	ENSCSAG00000016685	-	93	71.525	Chlorocebus_sabaeus
ENSSPUG00000000531	APEX1	99	74.448	ENSCPBG00000009567	APEX1	92	79.110	Chrysemys_picta_bellii
ENSSPUG00000000531	APEX1	99	53.846	ENSCING00000008137	-	94	53.846	Ciona_intestinalis
ENSSPUG00000000531	APEX1	94	50.000	ENSCSAVG00000007144	-	99	52.529	Ciona_savignyi
ENSSPUG00000000531	APEX1	99	71.525	ENSCANG00000030726	APEX1	93	71.525	Colobus_angolensis_palliatus
ENSSPUG00000000531	APEX1	95	72.982	ENSCGRG00001017046	Apex1	90	72.982	Cricetulus_griseus_chok1gshd
ENSSPUG00000000531	APEX1	95	72.982	ENSCGRG00000008984	Apex1	90	72.982	Cricetulus_griseus_crigri
ENSSPUG00000000531	APEX1	95	70.000	ENSCSEG00000017499	apex1	90	70.000	Cynoglossus_semilaevis
ENSSPUG00000000531	APEX1	94	73.477	ENSCVAG00000022075	apex1	90	73.571	Cyprinodon_variegatus
ENSSPUG00000000531	APEX1	99	70.130	ENSDARG00000045843	apex1	99	70.874	Danio_rerio
ENSSPUG00000000531	APEX1	95	70.036	ENSDNOG00000042234	APEX1	88	68.166	Dasypus_novemcinctus
ENSSPUG00000000531	APEX1	99	70.408	ENSDORG00000001616	Apex1	92	70.408	Dipodomys_ordii
ENSSPUG00000000531	APEX1	95	73.333	ENSETEG00000004855	-	90	73.333	Echinops_telfairi
ENSSPUG00000000531	APEX1	79	61.181	ENSEBUG00000000622	-	92	60.924	Eptatretus_burgeri
ENSSPUG00000000531	APEX1	99	71.088	ENSEASG00005017489	APEX1	68	71.088	Equus_asinus_asinus
ENSSPUG00000000531	APEX1	99	71.088	ENSECAG00000022325	APEX1	75	71.088	Equus_caballus
ENSSPUG00000000531	APEX1	92	70.652	ENSEEUG00000012569	APEX1	96	70.652	Erinaceus_europaeus
ENSSPUG00000000531	APEX1	93	73.455	ENSELUG00000021706	apex1	99	68.489	Esox_lucius
ENSSPUG00000000531	APEX1	95	73.333	ENSFCAG00000030869	APEX1	90	73.333	Felis_catus
ENSSPUG00000000531	APEX1	99	72.093	ENSFDAG00000006120	APEX1	95	72.093	Fukomys_damarensis
ENSSPUG00000000531	APEX1	94	73.835	ENSFHEG00000009031	apex1	75	73.929	Fundulus_heteroclitus
ENSSPUG00000000531	APEX1	99	68.259	ENSGMOG00000007943	apex1	92	68.259	Gadus_morhua
ENSSPUG00000000531	APEX1	99	68.506	ENSGAFG00000005311	apex1	90	73.214	Gambusia_affinis
ENSSPUG00000000531	APEX1	94	73.118	ENSGACG00000019497	apex1	99	72.830	Gasterosteus_aculeatus
ENSSPUG00000000531	APEX1	99	74.132	ENSGAGG00000014999	APEX1	92	78.767	Gopherus_agassizii
ENSSPUG00000000531	APEX1	96	72.887	ENSGGOG00000002128	APEX1	89	72.887	Gorilla_gorilla
ENSSPUG00000000531	APEX1	93	73.358	ENSHBUG00000005894	apex1	91	72.857	Haplochromis_burtoni
ENSSPUG00000000531	APEX1	99	72.757	ENSHGLG00000002848	APEX1	95	72.757	Heterocephalus_glaber_female
ENSSPUG00000000531	APEX1	99	72.757	ENSHGLG00100017878	APEX1	95	72.757	Heterocephalus_glaber_male
ENSSPUG00000000531	APEX1	95	73.571	ENSHCOG00000009961	apex1	90	73.571	Hippocampus_comes
ENSSPUG00000000531	APEX1	99	69.032	ENSIPUG00000005799	apex1	99	69.032	Ictalurus_punctatus
ENSSPUG00000000531	APEX1	96	72.183	ENSSTOG00000010096	APEX1	89	72.183	Ictidomys_tridecemlineatus
ENSSPUG00000000531	APEX1	95	64.561	ENSJJAG00000003660	-	90	64.561	Jaculus_jaculus
ENSSPUG00000000531	APEX1	95	72.982	ENSJJAG00000012067	-	90	72.982	Jaculus_jaculus
ENSSPUG00000000531	APEX1	95	64.561	ENSJJAG00000020465	-	92	64.561	Jaculus_jaculus
ENSSPUG00000000531	APEX1	94	74.194	ENSKMAG00000021171	apex1	90	74.286	Kryptolebias_marmoratus
ENSSPUG00000000531	APEX1	94	73.118	ENSLBEG00000010248	apex1	90	73.214	Labrus_bergylta
ENSSPUG00000000531	APEX1	99	69.329	ENSLACG00000008617	APEX1	99	69.329	Latimeria_chalumnae
ENSSPUG00000000531	APEX1	99	73.630	ENSLOCG00000015516	apex1	91	73.630	Lepisosteus_oculatus
ENSSPUG00000000531	APEX1	96	73.592	ENSLAFG00000021872	APEX1	89	73.592	Loxodonta_africana
ENSSPUG00000000531	APEX1	99	71.186	ENSMFAG00000002565	APEX1	93	71.186	Macaca_fascicularis
ENSSPUG00000000531	APEX1	99	71.186	ENSMMUG00000048039	APEX1	93	71.186	Macaca_mulatta
ENSSPUG00000000531	APEX1	99	71.186	ENSMNEG00000036944	APEX1	93	71.186	Macaca_nemestrina
ENSSPUG00000000531	APEX1	99	71.186	ENSMLEG00000042125	APEX1	93	71.186	Mandrillus_leucophaeus
ENSSPUG00000000531	APEX1	94	72.401	ENSMAMG00000023526	apex1	90	72.500	Mastacembelus_armatus
ENSSPUG00000000531	APEX1	93	73.723	ENSMZEG00005014187	apex1	90	73.214	Maylandia_zebra
ENSSPUG00000000531	APEX1	99	70.307	ENSMAUG00000013994	Apex1	93	70.307	Mesocricetus_auratus
ENSSPUG00000000531	APEX1	95	72.632	ENSMICG00000043554	APEX1	90	72.632	Microcebus_murinus
ENSSPUG00000000531	APEX1	99	71.672	ENSMOCG00000013721	Apex1	92	71.672	Microtus_ochrogaster
ENSSPUG00000000531	APEX1	94	70.714	ENSMMOG00000010031	apex1	88	70.819	Mola_mola
ENSSPUG00000000531	APEX1	94	73.118	ENSMODG00000007125	APEX1	91	71.575	Monodelphis_domestica
ENSSPUG00000000531	APEX1	94	67.025	ENSMALG00000011699	apex1	75	67.143	Monopterus_albus
ENSSPUG00000000531	APEX1	96	72.727	MGP_CAROLIEiJ_G0019209	Apex1	90	72.727	Mus_caroli
ENSSPUG00000000531	APEX1	99	68.354	ENSMUSG00000035960	Apex1	99	68.354	Mus_musculus
ENSSPUG00000000531	APEX1	93	73.188	MGP_PahariEiJ_G0030232	Apex1	99	68.038	Mus_pahari
ENSSPUG00000000531	APEX1	99	68.354	MGP_SPRETEiJ_G0020101	Apex1	99	68.354	Mus_spretus
ENSSPUG00000000531	APEX1	99	69.831	ENSMLUG00000028957	APEX1	92	69.831	Myotis_lucifugus
ENSSPUG00000000531	APEX1	82	56.148	ENSNGAG00000021748	-	74	56.148	Nannospalax_galili
ENSSPUG00000000531	APEX1	99	70.432	ENSNGAG00000002725	-	95	70.432	Nannospalax_galili
ENSSPUG00000000531	APEX1	93	73.358	ENSNBRG00000005334	apex1	83	72.340	Neolamprologus_brichardi
ENSSPUG00000000531	APEX1	96	72.887	ENSNLEG00000010839	APEX1	91	72.887	Nomascus_leucogenys
ENSSPUG00000000531	APEX1	99	69.048	ENSMEUG00000014519	APEX1	94	69.048	Notamacropus_eugenii
ENSSPUG00000000531	APEX1	99	70.307	ENSOPRG00000014029	APEX1	92	70.307	Ochotona_princeps
ENSSPUG00000000531	APEX1	99	71.096	ENSODEG00000001703	-	95	71.096	Octodon_degus
ENSSPUG00000000531	APEX1	99	55.375	ENSODEG00000006583	-	94	55.375	Octodon_degus
ENSSPUG00000000531	APEX1	96	56.842	ENSODEG00000004777	-	93	56.842	Octodon_degus
ENSSPUG00000000531	APEX1	93	73.913	ENSONIG00000012089	apex1	90	73.571	Oreochromis_niloticus
ENSSPUG00000000531	APEX1	92	71.898	ENSOANG00000008836	APEX1	68	71.898	Ornithorhynchus_anatinus
ENSSPUG00000000531	APEX1	96	72.887	ENSOCUG00000005022	APEX1	89	72.887	Oryctolagus_cuniculus
ENSSPUG00000000531	APEX1	93	75.000	ENSORLG00000012378	apex1	90	74.643	Oryzias_latipes
ENSSPUG00000000531	APEX1	93	75.000	ENSORLG00020021371	apex1	90	74.643	Oryzias_latipes_hni
ENSSPUG00000000531	APEX1	93	75.000	ENSORLG00015020089	apex1	90	74.643	Oryzias_latipes_hsok
ENSSPUG00000000531	APEX1	94	73.477	ENSOMEG00000018876	apex1	90	73.571	Oryzias_melastigma
ENSSPUG00000000531	APEX1	95	65.141	ENSOGAG00000029355	-	96	62.791	Otolemur_garnettii
ENSSPUG00000000531	APEX1	95	72.982	ENSOGAG00000013335	-	90	72.982	Otolemur_garnettii
ENSSPUG00000000531	APEX1	92	68.478	ENSOARG00000001876	-	90	68.478	Ovis_aries
ENSSPUG00000000531	APEX1	98	58.503	ENSOARG00000014424	-	94	58.503	Ovis_aries
ENSSPUG00000000531	APEX1	95	71.228	ENSOARG00000019740	-	90	71.228	Ovis_aries
ENSSPUG00000000531	APEX1	96	73.239	ENSPPAG00000038760	APEX1	91	73.239	Pan_paniscus
ENSSPUG00000000531	APEX1	95	73.333	ENSPPRG00000011794	APEX1	90	73.333	Panthera_pardus
ENSSPUG00000000531	APEX1	95	73.333	ENSPTIG00000014829	APEX1	90	73.333	Panthera_tigris_altaica
ENSSPUG00000000531	APEX1	96	73.239	ENSPTRG00000006093	APEX1	91	73.239	Pan_troglodytes
ENSSPUG00000000531	APEX1	99	71.186	ENSPANG00000022757	APEX1	93	71.186	Papio_anubis
ENSSPUG00000000531	APEX1	93	74.182	ENSPKIG00000003504	apex1	90	73.239	Paramormyrops_kingsleyae
ENSSPUG00000000531	APEX1	81	68.293	ENSPMGG00000016596	apex1	74	68.293	Periophthalmus_magnuspinnatus
ENSSPUG00000000531	APEX1	95	73.333	ENSPEMG00000019097	Apex1	90	73.333	Peromyscus_maniculatus_bairdii
ENSSPUG00000000531	APEX1	99	70.068	ENSPMAG00000007275	-	99	70.068	Petromyzon_marinus
ENSSPUG00000000531	APEX1	95	71.277	ENSPCIG00000023274	APEX1	92	70.890	Phascolarctos_cinereus
ENSSPUG00000000531	APEX1	94	73.835	ENSPFOG00000004178	apex1	90	73.929	Poecilia_formosa
ENSSPUG00000000531	APEX1	94	72.760	ENSPLAG00000012779	apex1	90	72.857	Poecilia_latipinna
ENSSPUG00000000531	APEX1	94	73.835	ENSPMEG00000019623	apex1	90	73.929	Poecilia_mexicana
ENSSPUG00000000531	APEX1	94	73.477	ENSPREG00000014298	apex1	90	73.571	Poecilia_reticulata
ENSSPUG00000000531	APEX1	96	73.239	ENSPPYG00000005565	APEX1	89	73.239	Pongo_abelii
ENSSPUG00000000531	APEX1	95	71.228	ENSPCAG00000010376	APEX1	90	71.228	Procavia_capensis
ENSSPUG00000000531	APEX1	95	72.982	ENSPCOG00000021564	APEX1	90	72.982	Propithecus_coquereli
ENSSPUG00000000531	APEX1	95	72.982	ENSPVAG00000010736	APEX1	89	72.982	Pteropus_vampyrus
ENSSPUG00000000531	APEX1	93	73.723	ENSPNYG00000023940	apex1	90	73.214	Pundamilia_nyererei
ENSSPUG00000000531	APEX1	92	70.330	ENSPNAG00000020897	apex1	87	72.587	Pygocentrus_nattereri
ENSSPUG00000000531	APEX1	95	72.632	ENSRNOG00000009663	Apex1	90	72.632	Rattus_norvegicus
ENSSPUG00000000531	APEX1	99	71.525	ENSRBIG00000038325	APEX1	92	71.525	Rhinopithecus_bieti
ENSSPUG00000000531	APEX1	96	73.239	ENSSBOG00000018921	-	89	73.239	Saimiri_boliviensis_boliviensis
ENSSPUG00000000531	APEX1	99	60.784	ENSSBOG00000031372	-	99	60.784	Saimiri_boliviensis_boliviensis
ENSSPUG00000000531	APEX1	95	70.877	ENSSHAG00000013524	APEX1	92	69.463	Sarcophilus_harrisii
ENSSPUG00000000531	APEX1	99	67.320	ENSSFOG00015001948	apex1	99	67.314	Scleropages_formosus
ENSSPUG00000000531	APEX1	92	72.527	ENSSMAG00000013348	apex1	90	70.345	Scophthalmus_maximus
ENSSPUG00000000531	APEX1	94	73.477	ENSSDUG00000016377	apex1	90	73.571	Seriola_dumerili
ENSSPUG00000000531	APEX1	94	73.477	ENSSLDG00000023005	apex1	90	73.571	Seriola_lalandi_dorsalis
ENSSPUG00000000531	APEX1	94	70.251	ENSSPAG00000000458	apex1	92	70.357	Stegastes_partitus
ENSSPUG00000000531	APEX1	99	68.139	ENSSSCG00000040060	-	99	68.139	Sus_scrofa
ENSSPUG00000000531	APEX1	99	42.282	ENSSSCG00000039705	-	99	42.282	Sus_scrofa
ENSSPUG00000000531	APEX1	79	58.120	ENSTGUG00000014378	APEX1	99	58.120	Taeniopygia_guttata
ENSSPUG00000000531	APEX1	93	71.014	ENSTRUG00000004268	apex1	87	68.942	Takifugu_rubripes
ENSSPUG00000000531	APEX1	95	70.714	ENSTNIG00000005778	apex1	91	70.714	Tetraodon_nigroviridis
ENSSPUG00000000531	APEX1	95	71.127	ENSTBEG00000006405	APEX1	90	71.228	Tupaia_belangeri
ENSSPUG00000000531	APEX1	79	71.368	ENSTTRG00000007860	APEX1	99	71.368	Tursiops_truncatus
ENSSPUG00000000531	APEX1	99	70.748	ENSUAMG00000010457	APEX1	92	70.748	Ursus_americanus
ENSSPUG00000000531	APEX1	99	70.748	ENSUMAG00000009178	APEX1	92	70.748	Ursus_maritimus
ENSSPUG00000000531	APEX1	79	66.946	ENSVPAG00000005083	APEX1	99	66.946	Vicugna_pacos
ENSSPUG00000000531	APEX1	95	72.887	ENSVVUG00000009010	APEX1	90	72.982	Vulpes_vulpes
ENSSPUG00000000531	APEX1	99	65.397	ENSXETG00000024773	apex1	92	69.072	Xenopus_tropicalis
ENSSPUG00000000531	APEX1	99	68.506	ENSXCOG00000015233	apex1	99	68.506	Xiphophorus_couchianus
ENSSPUG00000000531	APEX1	99	70.890	ENSXMAG00000006195	apex1	99	68.506	Xiphophorus_maculatus