EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000000778 (Gene tree)
Gene ID: -
Gene Symbol: ZC3HC1
Alias: NIPA
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 23250 bases
Position: chrQEPC01000343.1:1027203-1050452
Accession: 29913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000000995	zf-C3HC	PF07967.13	5.7e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000001049	ZC3HC1-201	1350	-	ENSSPUP00000000995	449 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000000778's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000000778's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000000778	ZC3HC1	86	63.776	ENSG00000091732	ZC3HC1	84	63.776	Homo_sapiens
ENSSPUG00000000778	ZC3HC1	81	39.810	ENSAPOG00000009078	zc3hc1	82	39.623	Acanthochromis_polyacanthus
ENSSPUG00000000778	ZC3HC1	86	58.352	ENSAMEG00000005425	ZC3HC1	86	58.352	Ailuropoda_melanoleuca
ENSSPUG00000000778	ZC3HC1	81	40.802	ENSACIG00000019513	zc3hc1	82	40.610	Amphilophus_citrinellus
ENSSPUG00000000778	ZC3HC1	82	39.059	ENSAOCG00000024310	zc3hc1	83	39.486	Amphiprion_ocellaris
ENSSPUG00000000778	ZC3HC1	82	39.059	ENSAPEG00000004907	zc3hc1	83	39.486	Amphiprion_percula
ENSSPUG00000000778	ZC3HC1	81	40.141	ENSATEG00000016898	zc3hc1	85	39.953	Anabas_testudineus
ENSSPUG00000000778	ZC3HC1	86	58.255	ENSAPLG00000003832	ZC3HC1	96	58.255	Anas_platyrhynchos
ENSSPUG00000000778	ZC3HC1	87	61.036	ENSACAG00000001638	ZC3HC1	87	60.674	Anolis_carolinensis
ENSSPUG00000000778	ZC3HC1	86	56.422	ENSANAG00000022213	ZC3HC1	86	56.422	Aotus_nancymaae
ENSSPUG00000000778	ZC3HC1	80	39.953	ENSACLG00000025033	zc3hc1	88	39.765	Astatotilapia_calliptera
ENSSPUG00000000778	ZC3HC1	91	37.632	ENSAMXG00000036792	zc3hc1	97	37.632	Astyanax_mexicanus
ENSSPUG00000000778	ZC3HC1	86	58.391	ENSBTAG00000011247	ZC3HC1	86	58.391	Bos_taurus
ENSSPUG00000000778	ZC3HC1	86	58.219	ENSCJAG00000010536	ZC3HC1	86	58.219	Callithrix_jacchus
ENSSPUG00000000778	ZC3HC1	86	58.447	ENSCAFG00000028735	-	86	58.447	Canis_familiaris
ENSSPUG00000000778	ZC3HC1	86	58.676	ENSCAFG00000031850	-	86	58.676	Canis_familiaris
ENSSPUG00000000778	ZC3HC1	86	58.447	ENSCAFG00000029401	-	84	58.447	Canis_familiaris
ENSSPUG00000000778	ZC3HC1	86	58.050	ENSCAFG00000001499	-	85	58.050	Canis_familiaris
ENSSPUG00000000778	ZC3HC1	86	58.447	ENSCAFG00020006829	-	86	58.447	Canis_lupus_dingo
ENSSPUG00000000778	ZC3HC1	86	56.818	ENSCAFG00020023333	-	86	56.818	Canis_lupus_dingo
ENSSPUG00000000778	ZC3HC1	86	51.620	ENSCHIG00000014103	ZC3HC1	85	51.620	Capra_hircus
ENSSPUG00000000778	ZC3HC1	85	58.237	ENSTSYG00000002843	ZC3HC1	85	58.237	Carlito_syrichta
ENSSPUG00000000778	ZC3HC1	86	48.622	ENSCAPG00000016300	ZC3HC1	99	48.223	Cavia_aperea
ENSSPUG00000000778	ZC3HC1	85	56.148	ENSCPOG00000014034	ZC3HC1	88	55.684	Cavia_porcellus
ENSSPUG00000000778	ZC3HC1	86	42.130	ENSCCAG00000020384	ZC3HC1	80	61.404	Cebus_capucinus
ENSSPUG00000000778	ZC3HC1	86	57.241	ENSCATG00000023130	ZC3HC1	92	55.505	Cercocebus_atys
ENSSPUG00000000778	ZC3HC1	77	52.707	ENSCLAG00000008260	ZC3HC1	82	53.276	Chinchilla_lanigera
ENSSPUG00000000778	ZC3HC1	67	54.885	ENSCSAG00000009881	ZC3HC1	91	54.885	Chlorocebus_sabaeus
ENSSPUG00000000778	ZC3HC1	86	57.701	ENSCHOG00000011846	ZC3HC1	95	57.701	Choloepus_hoffmanni
ENSSPUG00000000778	ZC3HC1	88	67.568	ENSCPBG00000017519	ZC3HC1	88	67.568	Chrysemys_picta_bellii
ENSSPUG00000000778	ZC3HC1	86	56.782	ENSCANG00000029091	ZC3HC1	86	56.782	Colobus_angolensis_palliatus
ENSSPUG00000000778	ZC3HC1	86	59.174	ENSCGRG00001018805	Zc3hc1	90	58.770	Cricetulus_griseus_chok1gshd
ENSSPUG00000000778	ZC3HC1	86	58.161	ENSCGRG00000017114	Zc3hc1	86	58.161	Cricetulus_griseus_crigri
ENSSPUG00000000778	ZC3HC1	80	40.347	ENSCSEG00000009284	zc3hc1	79	40.347	Cynoglossus_semilaevis
ENSSPUG00000000778	ZC3HC1	81	38.372	ENSCVAG00000011566	zc3hc1	82	38.372	Cyprinodon_variegatus
ENSSPUG00000000778	ZC3HC1	89	41.737	ENSDARG00000062651	zc3hc1	92	41.737	Danio_rerio
ENSSPUG00000000778	ZC3HC1	86	57.701	ENSDNOG00000045016	ZC3HC1	86	57.701	Dasypus_novemcinctus
ENSSPUG00000000778	ZC3HC1	79	58.416	ENSDORG00000008697	Zc3hc1	86	58.416	Dipodomys_ordii
ENSSPUG00000000778	ZC3HC1	87	57.562	ENSEASG00005008789	ZC3HC1	94	57.562	Equus_asinus_asinus
ENSSPUG00000000778	ZC3HC1	86	57.569	ENSECAG00000017886	ZC3HC1	86	57.569	Equus_caballus
ENSSPUG00000000778	ZC3HC1	70	65.318	ENSEEUG00000003123	ZC3HC1	62	65.318	Erinaceus_europaeus
ENSSPUG00000000778	ZC3HC1	86	58.621	ENSFCAG00000010429	ZC3HC1	92	56.818	Felis_catus
ENSSPUG00000000778	ZC3HC1	84	56.381	ENSFALG00000005006	ZC3HC1	93	56.381	Ficedula_albicollis
ENSSPUG00000000778	ZC3HC1	85	56.944	ENSFDAG00000019897	ZC3HC1	85	56.944	Fukomys_damarensis
ENSSPUG00000000778	ZC3HC1	81	40.281	ENSFHEG00000020149	zc3hc1	82	39.858	Fundulus_heteroclitus
ENSSPUG00000000778	ZC3HC1	80	37.317	ENSGMOG00000002914	zc3hc1	82	39.243	Gadus_morhua
ENSSPUG00000000778	ZC3HC1	87	60.230	ENSGALG00000008003	ZC3HC1	88	59.318	Gallus_gallus
ENSSPUG00000000778	ZC3HC1	82	37.678	ENSGAFG00000016095	zc3hc1	83	37.500	Gambusia_affinis
ENSSPUG00000000778	ZC3HC1	79	42.615	ENSGACG00000019706	zc3hc1	82	40.995	Gasterosteus_aculeatus
ENSSPUG00000000778	ZC3HC1	74	65.789	ENSGAGG00000016106	ZC3HC1	96	65.789	Gopherus_agassizii
ENSSPUG00000000778	ZC3HC1	87	57.727	ENSGGOG00000015504	ZC3HC1	90	57.727	Gorilla_gorilla
ENSSPUG00000000778	ZC3HC1	80	39.953	ENSHBUG00000008347	zc3hc1	81	39.765	Haplochromis_burtoni
ENSSPUG00000000778	ZC3HC1	85	58.430	ENSHGLG00000005085	ZC3HC1	89	58.430	Heterocephalus_glaber_female
ENSSPUG00000000778	ZC3HC1	85	58.430	ENSHGLG00100011395	ZC3HC1	89	58.430	Heterocephalus_glaber_male
ENSSPUG00000000778	ZC3HC1	81	40.097	ENSHCOG00000014309	zc3hc1	82	42.925	Hippocampus_comes
ENSSPUG00000000778	ZC3HC1	86	62.532	ENSSTOG00000023599	-	84	62.532	Ictidomys_tridecemlineatus
ENSSPUG00000000778	ZC3HC1	81	41.093	ENSKMAG00000015315	zc3hc1	77	40.855	Kryptolebias_marmoratus
ENSSPUG00000000778	ZC3HC1	80	40.094	ENSLBEG00000017325	zc3hc1	87	40.376	Labrus_bergylta
ENSSPUG00000000778	ZC3HC1	68	49.589	ENSLACG00000013032	ZC3HC1	87	49.589	Latimeria_chalumnae
ENSSPUG00000000778	ZC3HC1	83	46.853	ENSLOCG00000015963	zc3hc1	84	47.907	Lepisosteus_oculatus
ENSSPUG00000000778	ZC3HC1	85	58.851	ENSLAFG00000001292	ZC3HC1	85	58.851	Loxodonta_africana
ENSSPUG00000000778	ZC3HC1	86	57.241	ENSMFAG00000030176	ZC3HC1	92	55.505	Macaca_fascicularis
ENSSPUG00000000778	ZC3HC1	86	55.734	ENSMMUG00000006155	ZC3HC1	92	55.505	Macaca_mulatta
ENSSPUG00000000778	ZC3HC1	86	57.471	ENSMNEG00000011833	ZC3HC1	92	55.734	Macaca_nemestrina
ENSSPUG00000000778	ZC3HC1	86	57.241	ENSMLEG00000027328	ZC3HC1	92	55.505	Mandrillus_leucophaeus
ENSSPUG00000000778	ZC3HC1	81	39.720	ENSMAMG00000010691	zc3hc1	83	39.817	Mastacembelus_armatus
ENSSPUG00000000778	ZC3HC1	80	39.953	ENSMZEG00005007142	zc3hc1	81	39.765	Maylandia_zebra
ENSSPUG00000000778	ZC3HC1	88	59.368	ENSMGAG00000002977	ZC3HC1	88	59.368	Meleagris_gallopavo
ENSSPUG00000000778	ZC3HC1	77	53.015	ENSMAUG00000017032	Zc3hc1	86	53.015	Mesocricetus_auratus
ENSSPUG00000000778	ZC3HC1	86	57.931	ENSMICG00000009167	ZC3HC1	86	57.931	Microcebus_murinus
ENSSPUG00000000778	ZC3HC1	85	59.165	ENSMOCG00000015239	Zc3hc1	88	59.165	Microtus_ochrogaster
ENSSPUG00000000778	ZC3HC1	81	38.015	ENSMMOG00000002204	zc3hc1	93	38.015	Mola_mola
ENSSPUG00000000778	ZC3HC1	86	47.333	ENSMODG00000014630	ZC3HC1	85	48.222	Monodelphis_domestica
ENSSPUG00000000778	ZC3HC1	81	40.326	ENSMALG00000014447	zc3hc1	82	39.907	Monopterus_albus
ENSSPUG00000000778	ZC3HC1	86	62.944	MGP_CAROLIEiJ_G0028183	Zc3hc1	90	56.948	Mus_caroli
ENSSPUG00000000778	ZC3HC1	86	62.690	ENSMUSG00000039130	Zc3hc1	90	56.720	Mus_musculus
ENSSPUG00000000778	ZC3HC1	86	57.143	MGP_PahariEiJ_G0021941	Zc3hc1	89	51.487	Mus_pahari
ENSSPUG00000000778	ZC3HC1	86	62.690	MGP_SPRETEiJ_G0029183	Zc3hc1	84	62.690	Mus_spretus
ENSSPUG00000000778	ZC3HC1	86	58.730	ENSMPUG00000005297	ZC3HC1	86	58.730	Mustela_putorius_furo
ENSSPUG00000000778	ZC3HC1	60	52.351	ENSMLUG00000029228	-	90	52.351	Myotis_lucifugus
ENSSPUG00000000778	ZC3HC1	85	57.604	ENSMLUG00000000063	-	85	57.471	Myotis_lucifugus
ENSSPUG00000000778	ZC3HC1	86	58.486	ENSNGAG00000019014	Zc3hc1	90	58.087	Nannospalax_galili
ENSSPUG00000000778	ZC3HC1	80	39.905	ENSNBRG00000004577	zc3hc1	81	39.716	Neolamprologus_brichardi
ENSSPUG00000000778	ZC3HC1	86	57.471	ENSNLEG00000012698	ZC3HC1	91	54.913	Nomascus_leucogenys
ENSSPUG00000000778	ZC3HC1	86	58.621	ENSMEUG00000011023	ZC3HC1	86	58.621	Notamacropus_eugenii
ENSSPUG00000000778	ZC3HC1	62	66.667	ENSOPRG00000007867	-	56	66.667	Ochotona_princeps
ENSSPUG00000000778	ZC3HC1	85	57.968	ENSODEG00000014604	ZC3HC1	85	57.737	Octodon_degus
ENSSPUG00000000778	ZC3HC1	81	40.189	ENSONIG00000011644	zc3hc1	82	40.000	Oreochromis_niloticus
ENSSPUG00000000778	ZC3HC1	87	53.761	ENSOANG00000011460	ZC3HC1	96	53.761	Ornithorhynchus_anatinus
ENSSPUG00000000778	ZC3HC1	86	55.936	ENSOCUG00000017137	ZC3HC1	86	55.936	Oryctolagus_cuniculus
ENSSPUG00000000778	ZC3HC1	81	39.294	ENSORLG00000014409	zc3hc1	81	39.059	Oryzias_latipes
ENSSPUG00000000778	ZC3HC1	81	39.294	ENSORLG00020015874	zc3hc1	81	39.059	Oryzias_latipes_hni
ENSSPUG00000000778	ZC3HC1	81	39.578	ENSORLG00015014641	zc3hc1	81	39.344	Oryzias_latipes_hsok
ENSSPUG00000000778	ZC3HC1	84	41.121	ENSOMEG00000000215	zc3hc1	86	40.515	Oryzias_melastigma
ENSSPUG00000000778	ZC3HC1	84	40.515	ENSOMEG00000020604	zc3hc1	86	40.281	Oryzias_melastigma
ENSSPUG00000000778	ZC3HC1	86	51.264	ENSOGAG00000026193	ZC3HC1	86	51.264	Otolemur_garnettii
ENSSPUG00000000778	ZC3HC1	86	57.534	ENSOARG00000004907	ZC3HC1	85	57.534	Ovis_aries
ENSSPUG00000000778	ZC3HC1	87	57.500	ENSPPAG00000043172	ZC3HC1	90	57.500	Pan_paniscus
ENSSPUG00000000778	ZC3HC1	86	58.161	ENSPPRG00000001004	ZC3HC1	92	56.364	Panthera_pardus
ENSSPUG00000000778	ZC3HC1	86	58.621	ENSPTIG00000007823	ZC3HC1	92	56.818	Panthera_tigris_altaica
ENSSPUG00000000778	ZC3HC1	87	57.500	ENSPTRG00000019685	ZC3HC1	90	57.500	Pan_troglodytes
ENSSPUG00000000778	ZC3HC1	86	55.505	ENSPANG00000014229	ZC3HC1	92	55.275	Papio_anubis
ENSSPUG00000000778	ZC3HC1	82	42.995	ENSPKIG00000007172	zc3hc1	82	42.995	Paramormyrops_kingsleyae
ENSSPUG00000000778	ZC3HC1	88	60.667	ENSPSIG00000016646	ZC3HC1	88	60.667	Pelodiscus_sinensis
ENSSPUG00000000778	ZC3HC1	82	55.610	ENSPMGG00000003548	zc3hc1	90	40.051	Periophthalmus_magnuspinnatus
ENSSPUG00000000778	ZC3HC1	86	57.604	ENSPEMG00000000514	Zc3hc1	90	57.859	Peromyscus_maniculatus_bairdii
ENSSPUG00000000778	ZC3HC1	86	56.481	ENSPCIG00000020619	ZC3HC1	94	57.682	Phascolarctos_cinereus
ENSSPUG00000000778	ZC3HC1	81	37.799	ENSPFOG00000003466	zc3hc1	82	37.530	Poecilia_formosa
ENSSPUG00000000778	ZC3HC1	81	37.150	ENSPLAG00000022211	zc3hc1	82	36.977	Poecilia_latipinna
ENSSPUG00000000778	ZC3HC1	81	37.947	ENSPMEG00000001458	zc3hc1	84	36.881	Poecilia_mexicana
ENSSPUG00000000778	ZC3HC1	81	38.278	ENSPREG00000004004	zc3hc1	82	38.095	Poecilia_reticulata
ENSSPUG00000000778	ZC3HC1	86	51.147	ENSPPYG00000017998	ZC3HC1	86	51.147	Pongo_abelii
ENSSPUG00000000778	ZC3HC1	88	57.432	ENSPCAG00000001182	ZC3HC1	95	57.432	Procavia_capensis
ENSSPUG00000000778	ZC3HC1	86	57.701	ENSPCOG00000017354	ZC3HC1	86	57.701	Propithecus_coquereli
ENSSPUG00000000778	ZC3HC1	86	54.253	ENSPVAG00000003195	ZC3HC1	86	55.172	Pteropus_vampyrus
ENSSPUG00000000778	ZC3HC1	80	39.953	ENSPNYG00000020692	zc3hc1	81	39.765	Pundamilia_nyererei
ENSSPUG00000000778	ZC3HC1	89	40.171	ENSPNAG00000020746	zc3hc1	93	40.171	Pygocentrus_nattereri
ENSSPUG00000000778	ZC3HC1	86	57.241	ENSRNOG00000010154	Zc3hc1	86	57.241	Rattus_norvegicus
ENSSPUG00000000778	ZC3HC1	86	57.011	ENSRBIG00000029409	ZC3HC1	95	57.011	Rhinopithecus_bieti
ENSSPUG00000000778	ZC3HC1	86	57.011	ENSRROG00000041831	ZC3HC1	91	55.275	Rhinopithecus_roxellana
ENSSPUG00000000778	ZC3HC1	72	66.667	ENSSBOG00000032787	ZC3HC1	80	61.404	Saimiri_boliviensis_boliviensis
ENSSPUG00000000778	ZC3HC1	86	58.904	ENSSHAG00000002529	ZC3HC1	94	58.559	Sarcophilus_harrisii
ENSSPUG00000000778	ZC3HC1	83	47.529	ENSSFOG00015003667	zc3hc1	80	47.196	Scleropages_formosus
ENSSPUG00000000778	ZC3HC1	81	39.443	ENSSMAG00000000647	zc3hc1	74	39.535	Scophthalmus_maximus
ENSSPUG00000000778	ZC3HC1	81	40.566	ENSSDUG00000004241	zc3hc1	80	40.515	Seriola_dumerili
ENSSPUG00000000778	ZC3HC1	81	40.330	ENSSLDG00000025056	zc3hc1	80	40.281	Seriola_lalandi_dorsalis
ENSSPUG00000000778	ZC3HC1	86	52.874	ENSSARG00000012013	ZC3HC1	86	52.874	Sorex_araneus
ENSSPUG00000000778	ZC3HC1	81	40.047	ENSSPAG00000020041	zc3hc1	82	39.858	Stegastes_partitus
ENSSPUG00000000778	ZC3HC1	86	57.143	ENSSSCG00000016565	ZC3HC1	94	56.486	Sus_scrofa
ENSSPUG00000000778	ZC3HC1	80	39.394	ENSTRUG00000020077	zc3hc1	81	39.394	Takifugu_rubripes
ENSSPUG00000000778	ZC3HC1	80	42.548	ENSTNIG00000007585	zc3hc1	85	42.344	Tetraodon_nigroviridis
ENSSPUG00000000778	ZC3HC1	86	47.586	ENSTBEG00000005216	ZC3HC1	86	47.586	Tupaia_belangeri
ENSSPUG00000000778	ZC3HC1	86	56.322	ENSTTRG00000008458	ZC3HC1	90	56.322	Tursiops_truncatus
ENSSPUG00000000778	ZC3HC1	86	58.621	ENSUAMG00000020249	ZC3HC1	86	58.621	Ursus_americanus
ENSSPUG00000000778	ZC3HC1	86	58.161	ENSUMAG00000009268	ZC3HC1	86	58.161	Ursus_maritimus
ENSSPUG00000000778	ZC3HC1	54	46.575	ENSVPAG00000010846	ZC3HC1	57	46.575	Vicugna_pacos
ENSSPUG00000000778	ZC3HC1	86	58.277	ENSVVUG00000012386	ZC3HC1	90	58.277	Vulpes_vulpes
ENSSPUG00000000778	ZC3HC1	84	49.417	ENSXETG00000033900	zc3hc1	88	49.417	Xenopus_tropicalis
ENSSPUG00000000778	ZC3HC1	84	36.554	ENSXCOG00000013570	zc3hc1	90	36.649	Xiphophorus_couchianus
ENSSPUG00000000778	ZC3HC1	82	38.967	ENSXMAG00000010979	zc3hc1	89	38.785	Xiphophorus_maculatus