EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000000784 (Gene tree)
Gene ID: -
Gene Symbol: DDX56
Alias: NOH61
Full Name: DEAD-box helicase 56
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 10418 bases
Position: chrQEPC01005433.1:2236039-2246456
Accession: 18193
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000000972	ResIII	PF04851.15	5.1e-07	1	1
ENSSPUP00000000973	ResIII	PF04851.15	6.1e-07	1	1
ENSSPUP00000000972	DEAD	PF00270.29	1.7e-37	1	1
ENSSPUP00000000973	DEAD	PF00270.29	2.1e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000001024	DDX56-201	2042	-	ENSSPUP00000000972	570 (aa)	-	-
ENSSPUT00000001026	DDX56-202	1941	-	ENSSPUP00000000973	623 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000000784's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000000784's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000000784	DDX56	69	31.313	ENSSPUG00000015687	DDX27	54	31.061
ENSSPUG00000000784	DDX56	73	32.075	ENSSPUG00000010688	DDX49	79	31.840
ENSSPUG00000000784	DDX56	70	31.095	ENSSPUG00000004958	DDX47	79	31.266
ENSSPUG00000000784	DDX56	68	30.556	ENSSPUG00000000720	DDX52	56	30.051

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000000784	DDX56	96	68.670	ENSG00000136271	DDX56	99	69.892	Homo_sapiens
ENSSPUG00000000784	DDX56	97	70.213	ENSAPOG00000017113	ddx56	100	70.390	Acanthochromis_polyacanthus
ENSSPUG00000000784	DDX56	96	68.132	ENSAMEG00000017711	DDX56	99	68.864	Ailuropoda_melanoleuca
ENSSPUG00000000784	DDX56	89	62.167	ENSACIG00000013747	ddx56	99	71.739	Amphilophus_citrinellus
ENSSPUG00000000784	DDX56	87	74.751	ENSAOCG00000018059	ddx56	95	74.409	Amphiprion_ocellaris
ENSSPUG00000000784	DDX56	85	74.898	ENSAOCG00000015447	-	87	74.898	Amphiprion_ocellaris
ENSSPUG00000000784	DDX56	95	71.196	ENSAPEG00000007267	ddx56	98	71.196	Amphiprion_percula
ENSSPUG00000000784	DDX56	95	70.578	ENSATEG00000005279	ddx56	98	70.758	Anabas_testudineus
ENSSPUG00000000784	DDX56	95	68.592	ENSACLG00000020113	ddx56	98	69.134	Astatotilapia_calliptera
ENSSPUG00000000784	DDX56	96	65.116	ENSAMXG00000019357	ddx56	99	66.011	Astyanax_mexicanus
ENSSPUG00000000784	DDX56	96	69.035	ENSBTAG00000010602	DDX56	99	69.399	Bos_taurus
ENSSPUG00000000784	DDX56	94	41.711	WBGene00016073	C24H12.4	86	41.607	Caenorhabditis_elegans
ENSSPUG00000000784	DDX56	96	68.727	ENSCJAG00000012233	DDX56	99	68.727	Callithrix_jacchus
ENSSPUG00000000784	DDX56	79	66.444	ENSCAFG00000029295	DDX56	99	67.111	Canis_familiaris
ENSSPUG00000000784	DDX56	96	66.484	ENSCAFG00020019695	DDX56	99	66.484	Canis_lupus_dingo
ENSSPUG00000000784	DDX56	96	69.414	ENSCHIG00000014261	DDX56	99	69.414	Capra_hircus
ENSSPUG00000000784	DDX56	96	68.190	ENSTSYG00000008048	DDX56	99	68.739	Carlito_syrichta
ENSSPUG00000000784	DDX56	83	66.596	ENSCAPG00000006286	DDX56	99	66.596	Cavia_aperea
ENSSPUG00000000784	DDX56	96	67.766	ENSCPOG00000003359	DDX56	99	67.766	Cavia_porcellus
ENSSPUG00000000784	DDX56	96	66.667	ENSCCAG00000025303	DDX56	99	67.577	Cebus_capucinus
ENSSPUG00000000784	DDX56	96	68.670	ENSCATG00000039389	DDX56	99	68.670	Cercocebus_atys
ENSSPUG00000000784	DDX56	95	67.837	ENSCLAG00000007666	DDX56	98	67.837	Chinchilla_lanigera
ENSSPUG00000000784	DDX56	96	68.852	ENSCSAG00000015636	DDX56	99	68.852	Chlorocebus_sabaeus
ENSSPUG00000000784	DDX56	96	81.769	ENSCPBG00000024556	DDX56	99	81.588	Chrysemys_picta_bellii
ENSSPUG00000000784	DDX56	88	59.449	ENSCING00000005185	-	98	59.687	Ciona_intestinalis
ENSSPUG00000000784	DDX56	86	60.878	ENSCSAVG00000011266	-	99	60.878	Ciona_savignyi
ENSSPUG00000000784	DDX56	95	69.245	ENSCANG00000028187	DDX56	98	69.245	Colobus_angolensis_palliatus
ENSSPUG00000000784	DDX56	96	68.488	ENSCGRG00001019019	Ddx56	99	68.488	Cricetulus_griseus_chok1gshd
ENSSPUG00000000784	DDX56	96	68.488	ENSCGRG00000011870	Ddx56	99	68.488	Cricetulus_griseus_crigri
ENSSPUG00000000784	DDX56	95	70.251	ENSCSEG00000008368	ddx56	98	70.251	Cynoglossus_semilaevis
ENSSPUG00000000784	DDX56	97	69.519	ENSCVAG00000006499	ddx56	100	69.697	Cyprinodon_variegatus
ENSSPUG00000000784	DDX56	97	68.393	ENSDARG00000020913	ddx56	99	68.393	Danio_rerio
ENSSPUG00000000784	DDX56	81	68.534	ENSDNOG00000036526	DDX56	96	68.534	Dasypus_novemcinctus
ENSSPUG00000000784	DDX56	98	47.509	FBgn0001565	Hlc	99	47.509	Drosophila_melanogaster
ENSSPUG00000000784	DDX56	83	46.947	ENSETEG00000019559	-	100	46.105	Echinops_telfairi
ENSSPUG00000000784	DDX56	71	61.481	ENSETEG00000002969	-	74	61.481	Echinops_telfairi
ENSSPUG00000000784	DDX56	95	61.372	ENSEBUG00000009986	ddx56	99	62.094	Eptatretus_burgeri
ENSSPUG00000000784	DDX56	96	67.216	ENSEASG00005017795	DDX56	99	67.766	Equus_asinus_asinus
ENSSPUG00000000784	DDX56	96	67.033	ENSECAG00000019897	DDX56	99	67.582	Equus_caballus
ENSSPUG00000000784	DDX56	83	68.220	ENSEEUG00000004849	DDX56	99	68.220	Erinaceus_europaeus
ENSSPUG00000000784	DDX56	95	72.131	ENSELUG00000004150	ddx56	98	72.678	Esox_lucius
ENSSPUG00000000784	DDX56	96	67.033	ENSFCAG00000010261	DDX56	99	67.336	Felis_catus
ENSSPUG00000000784	DDX56	95	68.207	ENSFDAG00000007128	DDX56	98	68.207	Fukomys_damarensis
ENSSPUG00000000784	DDX56	97	69.176	ENSFHEG00000018008	ddx56	96	74.600	Fundulus_heteroclitus
ENSSPUG00000000784	DDX56	95	67.153	ENSGAFG00000006906	ddx56	98	67.153	Gambusia_affinis
ENSSPUG00000000784	DDX56	92	83.048	ENSGAGG00000006789	DDX56	94	83.048	Gopherus_agassizii
ENSSPUG00000000784	DDX56	96	68.670	ENSGGOG00000012031	DDX56	99	68.670	Gorilla_gorilla
ENSSPUG00000000784	DDX56	93	64.825	ENSHBUG00000015246	ddx56	97	65.193	Haplochromis_burtoni
ENSSPUG00000000784	DDX56	95	68.207	ENSHGLG00000017271	DDX56	98	68.207	Heterocephalus_glaber_female
ENSSPUG00000000784	DDX56	95	68.207	ENSHGLG00100015731	DDX56	98	68.207	Heterocephalus_glaber_male
ENSSPUG00000000784	DDX56	96	70.255	ENSHCOG00000001685	ddx56	99	70.073	Hippocampus_comes
ENSSPUG00000000784	DDX56	97	66.135	ENSIPUG00000006602	ddx56	98	67.021	Ictalurus_punctatus
ENSSPUG00000000784	DDX56	96	68.132	ENSSTOG00000000464	DDX56	99	68.132	Ictidomys_tridecemlineatus
ENSSPUG00000000784	DDX56	95	67.468	ENSJJAG00000014269	Ddx56	99	67.468	Jaculus_jaculus
ENSSPUG00000000784	DDX56	96	69.946	ENSKMAG00000016611	ddx56	96	73.715	Kryptolebias_marmoratus
ENSSPUG00000000784	DDX56	95	68.525	ENSLBEG00000026281	ddx56	99	68.953	Labrus_bergylta
ENSSPUG00000000784	DDX56	96	73.188	ENSLACG00000015551	DDX56	98	73.788	Latimeria_chalumnae
ENSSPUG00000000784	DDX56	96	69.107	ENSLOCG00000015185	ddx56	99	69.821	Lepisosteus_oculatus
ENSSPUG00000000784	DDX56	97	68.603	ENSLAFG00000018206	DDX56	99	68.603	Loxodonta_africana
ENSSPUG00000000784	DDX56	96	68.670	ENSMFAG00000041001	DDX56	99	68.670	Macaca_fascicularis
ENSSPUG00000000784	DDX56	96	68.670	ENSMMUG00000002645	DDX56	99	68.670	Macaca_mulatta
ENSSPUG00000000784	DDX56	96	68.488	ENSMNEG00000028492	DDX56	99	68.488	Macaca_nemestrina
ENSSPUG00000000784	DDX56	96	68.852	ENSMLEG00000043591	DDX56	99	68.852	Mandrillus_leucophaeus
ENSSPUG00000000784	DDX56	95	69.328	ENSMAMG00000007776	ddx56	98	69.328	Mastacembelus_armatus
ENSSPUG00000000784	DDX56	95	68.592	ENSMZEG00005009813	ddx56	98	69.134	Maylandia_zebra
ENSSPUG00000000784	DDX56	96	69.287	ENSMICG00000005550	DDX56	99	69.287	Microcebus_murinus
ENSSPUG00000000784	DDX56	96	66.910	ENSMOCG00000016782	Ddx56	99	67.093	Microtus_ochrogaster
ENSSPUG00000000784	DDX56	91	72.264	ENSMMOG00000009654	ddx56	99	72.642	Mola_mola
ENSSPUG00000000784	DDX56	96	65.636	ENSMODG00000016137	DDX56	99	65.636	Monodelphis_domestica
ENSSPUG00000000784	DDX56	66	68.883	ENSMALG00000016910	ddx56	99	68.883	Monopterus_albus
ENSSPUG00000000784	DDX56	96	65.996	MGP_CAROLIEiJ_G0016069	Ddx56	99	65.996	Mus_caroli
ENSSPUG00000000784	DDX56	96	66.362	ENSMUSG00000004393	Ddx56	99	66.362	Mus_musculus
ENSSPUG00000000784	DDX56	96	66.362	MGP_PahariEiJ_G0016822	Ddx56	99	66.362	Mus_pahari
ENSSPUG00000000784	DDX56	96	66.362	MGP_SPRETEiJ_G0016911	Ddx56	99	66.362	Mus_spretus
ENSSPUG00000000784	DDX56	95	68.207	ENSMPUG00000018196	DDX56	87	67.760	Mustela_putorius_furo
ENSSPUG00000000784	DDX56	96	66.850	ENSMLUG00000003509	DDX56	99	67.766	Myotis_lucifugus
ENSSPUG00000000784	DDX56	96	67.883	ENSNGAG00000018785	Ddx56	99	67.883	Nannospalax_galili
ENSSPUG00000000784	DDX56	93	66.978	ENSNBRG00000002656	ddx56	93	69.126	Neolamprologus_brichardi
ENSSPUG00000000784	DDX56	96	69.217	ENSNLEG00000003816	DDX56	99	69.217	Nomascus_leucogenys
ENSSPUG00000000784	DDX56	86	66.531	ENSMEUG00000006788	DDX56	99	66.531	Notamacropus_eugenii
ENSSPUG00000000784	DDX56	95	67.652	ENSOPRG00000000292	-	98	67.652	Ochotona_princeps
ENSSPUG00000000784	DDX56	65	70.350	ENSODEG00000014807	DDX56	99	70.350	Octodon_degus
ENSSPUG00000000784	DDX56	95	70.404	ENSONIG00000011509	ddx56	98	70.404	Oreochromis_niloticus
ENSSPUG00000000784	DDX56	92	60.189	ENSOANG00000006320	-	99	59.924	Ornithorhynchus_anatinus
ENSSPUG00000000784	DDX56	73	59.277	ENSOANG00000015987	-	98	59.277	Ornithorhynchus_anatinus
ENSSPUG00000000784	DDX56	96	67.091	ENSOCUG00000022918	DDX56	99	67.399	Oryctolagus_cuniculus
ENSSPUG00000000784	DDX56	97	70.996	ENSORLG00000001434	ddx56	100	69.982	Oryzias_latipes
ENSSPUG00000000784	DDX56	97	70.870	ENSORLG00020015718	ddx56	97	70.213	Oryzias_latipes_hni
ENSSPUG00000000784	DDX56	97	71.250	ENSORLG00015003004	ddx56	96	70.232	Oryzias_latipes_hsok
ENSSPUG00000000784	DDX56	95	72.495	ENSOMEG00000022072	ddx56	98	71.455	Oryzias_melastigma
ENSSPUG00000000784	DDX56	96	69.161	ENSOGAG00000009981	DDX56	99	69.161	Otolemur_garnettii
ENSSPUG00000000784	DDX56	96	69.399	ENSOARG00000015240	DDX56	99	69.399	Ovis_aries
ENSSPUG00000000784	DDX56	96	55.797	ENSPPAG00000031263	-	99	55.435	Pan_paniscus
ENSSPUG00000000784	DDX56	96	65.771	ENSPPAG00000029147	DDX56	99	65.771	Pan_paniscus
ENSSPUG00000000784	DDX56	96	66.850	ENSPPRG00000014594	DDX56	99	67.216	Panthera_pardus
ENSSPUG00000000784	DDX56	88	62.475	ENSPTIG00000019500	DDX56	96	62.823	Panthera_tigris_altaica
ENSSPUG00000000784	DDX56	91	56.679	ENSPTRG00000052765	-	99	56.298	Pan_troglodytes
ENSSPUG00000000784	DDX56	96	68.670	ENSPTRG00000019147	DDX56	99	68.670	Pan_troglodytes
ENSSPUG00000000784	DDX56	96	68.306	ENSPANG00000002446	DDX56	99	68.306	Papio_anubis
ENSSPUG00000000784	DDX56	95	69.873	ENSPKIG00000018998	ddx56	98	69.873	Paramormyrops_kingsleyae
ENSSPUG00000000784	DDX56	92	72.779	ENSPMGG00000017421	ddx56	98	72.590	Periophthalmus_magnuspinnatus
ENSSPUG00000000784	DDX56	96	72.909	ENSPCIG00000009336	DDX56	99	72.909	Phascolarctos_cinereus
ENSSPUG00000000784	DDX56	95	71.636	ENSPFOG00000018658	ddx56	98	71.636	Poecilia_formosa
ENSSPUG00000000784	DDX56	95	71.818	ENSPLAG00000019208	ddx56	98	71.923	Poecilia_latipinna
ENSSPUG00000000784	DDX56	95	71.818	ENSPMEG00000001775	ddx56	98	72.381	Poecilia_mexicana
ENSSPUG00000000784	DDX56	96	70.789	ENSPREG00000015142	ddx56	98	71.636	Poecilia_reticulata
ENSSPUG00000000784	DDX56	96	68.852	ENSPPYG00000017591	DDX56	99	68.852	Pongo_abelii
ENSSPUG00000000784	DDX56	93	68.856	ENSPCAG00000011499	DDX56	99	68.856	Procavia_capensis
ENSSPUG00000000784	DDX56	96	69.104	ENSPCOG00000024864	DDX56	99	69.104	Propithecus_coquereli
ENSSPUG00000000784	DDX56	85	71.090	ENSPVAG00000000791	DDX56	87	71.090	Pteropus_vampyrus
ENSSPUG00000000784	DDX56	95	68.412	ENSPNYG00000019212	ddx56	98	68.953	Pundamilia_nyererei
ENSSPUG00000000784	DDX56	96	69.589	ENSPNAG00000025446	ddx56	100	70.483	Pygocentrus_nattereri
ENSSPUG00000000784	DDX56	96	66.969	ENSRNOG00000004670	Ddx56	99	66.606	Rattus_norvegicus
ENSSPUG00000000784	DDX56	96	68.670	ENSRBIG00000030140	DDX56	99	68.670	Rhinopithecus_bieti
ENSSPUG00000000784	DDX56	96	68.488	ENSRROG00000044428	DDX56	99	68.488	Rhinopithecus_roxellana
ENSSPUG00000000784	DDX56	97	40.735	YLR276C	-	99	40.735	Saccharomyces_cerevisiae
ENSSPUG00000000784	DDX56	96	68.545	ENSSBOG00000034339	DDX56	99	68.545	Saimiri_boliviensis_boliviensis
ENSSPUG00000000784	DDX56	83	71.579	ENSSHAG00000016615	DDX56	99	71.579	Sarcophilus_harrisii
ENSSPUG00000000784	DDX56	95	71.091	ENSSFOG00015012795	ddx56	98	71.091	Scleropages_formosus
ENSSPUG00000000784	DDX56	95	70.217	ENSSMAG00000011280	ddx56	96	72.989	Scophthalmus_maximus
ENSSPUG00000000784	DDX56	96	69.395	ENSSDUG00000023597	ddx56	99	69.751	Seriola_dumerili
ENSSPUG00000000784	DDX56	96	69.217	ENSSLDG00000018369	ddx56	99	69.573	Seriola_lalandi_dorsalis
ENSSPUG00000000784	DDX56	73	75.862	ENSSARG00000014363	DDX56	77	74.242	Sorex_araneus
ENSSPUG00000000784	DDX56	89	74.175	ENSSPAG00000009392	ddx56	96	73.996	Stegastes_partitus
ENSSPUG00000000784	DDX56	96	68.373	ENSSSCG00000016745	DDX56	99	68.921	Sus_scrofa
ENSSPUG00000000784	DDX56	96	68.373	ENSTRUG00000018623	ddx56	98	68.582	Takifugu_rubripes
ENSSPUG00000000784	DDX56	95	66.901	ENSTNIG00000013593	ddx56	99	67.616	Tetraodon_nigroviridis
ENSSPUG00000000784	DDX56	96	68.007	ENSTBEG00000007119	DDX56	99	68.007	Tupaia_belangeri
ENSSPUG00000000784	DDX56	84	68.067	ENSTTRG00000010552	DDX56	99	68.487	Tursiops_truncatus
ENSSPUG00000000784	DDX56	95	68.207	ENSUAMG00000014194	DDX56	98	68.762	Ursus_americanus
ENSSPUG00000000784	DDX56	95	68.207	ENSUMAG00000009666	DDX56	98	68.762	Ursus_maritimus
ENSSPUG00000000784	DDX56	96	67.766	ENSVVUG00000011905	DDX56	99	68.315	Vulpes_vulpes
ENSSPUG00000000784	DDX56	96	73.561	ENSXETG00000019000	ddx56	99	73.921	Xenopus_tropicalis
ENSSPUG00000000784	DDX56	95	70.111	ENSXCOG00000017413	ddx56	99	69.134	Xiphophorus_couchianus
ENSSPUG00000000784	DDX56	95	70.727	ENSXMAG00000018749	ddx56	98	71.869	Xiphophorus_maculatus