EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000000804 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 3600 bases
Position: chrQEPC01007512.1:5905191-5908790
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000001019	RRM_1	PF00076.22	2.9e-34	1	2
ENSSPUP00000001019	RRM_1	PF00076.22	2.9e-34	2	2
ENSSPUP00000001011	RRM_1	PF00076.22	1.3e-33	1	2
ENSSPUP00000001011	RRM_1	PF00076.22	1.3e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000001073	-	597	-	ENSSPUP00000001019	198 (aa)	-	-
ENSSPUT00000001065	-	959	-	ENSSPUP00000001011	253 (aa)	-	UPI000388F8AF

Gene Model

Click here to download ENSSPUG00000000804's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000000804's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000000804	-	86	43.889	ENSSPUG00000004967	SRSF6	57	42.995
ENSSPUG00000000804	-	87	40.741	ENSSPUG00000002464	SRSF5	66	40.107
ENSSPUG00000000804	-	87	41.622	ENSSPUG00000002052	-	75	42.000
ENSSPUG00000000804	-	84	73.054	ENSSPUG00000015680	SRSF9	80	72.021

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000000804	-	100	98.814	ENSG00000136450	SRSF1	100	100.000	Homo_sapiens
ENSSPUG00000000804	-	93	88.587	ENSAPOG00000008542	-	100	85.039	Acanthochromis_polyacanthus
ENSSPUG00000000804	-	91	90.608	ENSAPOG00000002748	-	98	83.951	Acanthochromis_polyacanthus
ENSSPUG00000000804	-	97	95.935	ENSAMEG00000002635	SRSF1	99	95.935	Ailuropoda_melanoleuca
ENSSPUG00000000804	-	91	89.503	ENSACIG00000008091	srsf1a	98	78.512	Amphilophus_citrinellus
ENSSPUG00000000804	-	91	91.160	ENSAOCG00000010671	-	98	84.774	Amphiprion_ocellaris
ENSSPUG00000000804	-	93	87.895	ENSAOCG00000000337	-	100	85.317	Amphiprion_ocellaris
ENSSPUG00000000804	-	91	91.160	ENSAPEG00000009915	-	98	84.774	Amphiprion_percula
ENSSPUG00000000804	-	93	87.895	ENSAPEG00000023352	-	99	85.375	Amphiprion_percula
ENSSPUG00000000804	-	91	91.160	ENSATEG00000022403	-	98	84.490	Anabas_testudineus
ENSSPUG00000000804	-	96	85.263	ENSATEG00000021567	-	100	84.146	Anabas_testudineus
ENSSPUG00000000804	-	97	99.593	ENSACAG00000005542	-	99	99.593	Anolis_carolinensis
ENSSPUG00000000804	-	100	98.814	ENSANAG00000020583	-	100	98.814	Aotus_nancymaae
ENSSPUG00000000804	-	96	68.421	ENSANAG00000025417	-	99	74.797	Aotus_nancymaae
ENSSPUG00000000804	-	96	94.355	ENSAMXG00000035996	srsf1a	98	94.355	Astyanax_mexicanus
ENSSPUG00000000804	-	73	85.437	ENSAMXG00000024373	-	94	85.024	Astyanax_mexicanus
ENSSPUG00000000804	-	100	98.814	ENSBTAG00000014766	SRSF1	100	98.814	Bos_taurus
ENSSPUG00000000804	-	95	88.360	ENSCJAG00000008111	-	88	89.848	Callithrix_jacchus
ENSSPUG00000000804	-	100	98.814	ENSCJAG00000041713	-	100	98.814	Callithrix_jacchus
ENSSPUG00000000804	-	100	98.814	ENSCAFG00000017430	SRSF1	100	98.814	Canis_familiaris
ENSSPUG00000000804	-	100	98.814	ENSCAFG00020025632	-	100	98.814	Canis_lupus_dingo
ENSSPUG00000000804	-	97	98.780	ENSCHIG00000010787	SRSF1	99	98.780	Capra_hircus
ENSSPUG00000000804	-	100	98.814	ENSTSYG00000013899	-	100	98.814	Carlito_syrichta
ENSSPUG00000000804	-	100	98.814	ENSCPOG00000032681	-	100	98.814	Cavia_porcellus
ENSSPUG00000000804	-	100	98.814	ENSCCAG00000029484	-	100	98.814	Cebus_capucinus
ENSSPUG00000000804	-	100	98.814	ENSCATG00000042294	-	100	98.814	Cercocebus_atys
ENSSPUG00000000804	-	100	98.814	ENSCLAG00000014707	-	100	98.814	Chinchilla_lanigera
ENSSPUG00000000804	-	100	98.024	ENSCSAG00000005642	-	100	98.024	Chlorocebus_sabaeus
ENSSPUG00000000804	-	97	98.780	ENSCHOG00000001899	SRSF1	99	98.780	Choloepus_hoffmanni
ENSSPUG00000000804	-	100	100.000	ENSCPBG00000009851	-	100	100.000	Chrysemys_picta_bellii
ENSSPUG00000000804	-	100	98.814	ENSCANG00000029726	-	100	98.814	Colobus_angolensis_palliatus
ENSSPUG00000000804	-	100	98.814	ENSCGRG00001000670	Srsf1	100	98.814	Cricetulus_griseus_chok1gshd
ENSSPUG00000000804	-	100	98.814	ENSCGRG00000005590	Srsf1	100	98.814	Cricetulus_griseus_crigri
ENSSPUG00000000804	-	93	83.000	ENSCSEG00000009973	-	100	79.924	Cynoglossus_semilaevis
ENSSPUG00000000804	-	91	91.304	ENSCSEG00000014272	-	98	85.772	Cynoglossus_semilaevis
ENSSPUG00000000804	-	98	84.184	ENSCVAG00000005458	-	98	85.772	Cyprinodon_variegatus
ENSSPUG00000000804	-	91	91.160	ENSCVAG00000018617	-	98	84.774	Cyprinodon_variegatus
ENSSPUG00000000804	-	96	93.676	ENSDARG00000057691	srsf1a	98	93.676	Danio_rerio
ENSSPUG00000000804	-	96	97.942	ENSDARG00000017843	srsf1b	98	97.942	Danio_rerio
ENSSPUG00000000804	-	100	98.814	ENSDNOG00000011737	-	100	98.814	Dasypus_novemcinctus
ENSSPUG00000000804	-	100	98.814	ENSDORG00000015082	Srsf1	100	98.814	Dipodomys_ordii
ENSSPUG00000000804	-	94	96.257	ENSETEG00000005349	-	63	97.283	Echinops_telfairi
ENSSPUG00000000804	-	100	98.814	ENSEASG00005002922	-	100	98.814	Equus_asinus_asinus
ENSSPUG00000000804	-	97	98.780	ENSECAG00000016654	SRSF1	99	98.780	Equus_caballus
ENSSPUG00000000804	-	94	97.326	ENSEEUG00000009255	-	63	98.370	Erinaceus_europaeus
ENSSPUG00000000804	-	92	92.857	ENSELUG00000021646	srsf1a	98	81.048	Esox_lucius
ENSSPUG00000000804	-	100	98.814	ENSFCAG00000002250	-	100	98.814	Felis_catus
ENSSPUG00000000804	-	100	83.399	ENSFALG00000005062	-	100	83.399	Ficedula_albicollis
ENSSPUG00000000804	-	100	98.814	ENSFDAG00000010646	-	100	98.814	Fukomys_damarensis
ENSSPUG00000000804	-	91	91.160	ENSFHEG00000003174	srsf1a	98	84.774	Fundulus_heteroclitus
ENSSPUG00000000804	-	94	87.097	ENSGMOG00000014787	-	99	83.471	Gadus_morhua
ENSSPUG00000000804	-	97	100.000	ENSGALG00000005525	SRSF1	99	100.000	Gallus_gallus
ENSSPUG00000000804	-	96	84.211	ENSGACG00000020621	srsf1b	100	74.390	Gasterosteus_aculeatus
ENSSPUG00000000804	-	100	100.000	ENSGAGG00000022965	-	100	100.000	Gopherus_agassizii
ENSSPUG00000000804	-	100	98.814	ENSGGOG00000004386	SRSF1	100	98.814	Gorilla_gorilla
ENSSPUG00000000804	-	91	90.000	ENSHBUG00000016788	srsf1a	98	84.362	Haplochromis_burtoni
ENSSPUG00000000804	-	85	97.674	ENSHGLG00000000600	-	100	97.674	Heterocephalus_glaber_female
ENSSPUG00000000804	-	85	97.674	ENSHGLG00000000669	-	100	97.674	Heterocephalus_glaber_female
ENSSPUG00000000804	-	100	98.814	ENSHGLG00100016906	-	100	98.814	Heterocephalus_glaber_male
ENSSPUG00000000804	-	91	87.568	ENSHCOG00000018918	srsf1a	97	81.526	Hippocampus_comes
ENSSPUG00000000804	-	94	92.188	ENSIPUG00000017039	srsf1a	98	94.355	Ictalurus_punctatus
ENSSPUG00000000804	-	97	97.154	ENSIPUG00000008750	srsf1b	99	97.154	Ictalurus_punctatus
ENSSPUG00000000804	-	100	98.814	ENSSTOG00000000243	-	100	98.814	Ictidomys_tridecemlineatus
ENSSPUG00000000804	-	64	92.126	ENSJJAG00000014464	-	95	88.189	Jaculus_jaculus
ENSSPUG00000000804	-	100	98.814	ENSJJAG00000000102	-	100	98.814	Jaculus_jaculus
ENSSPUG00000000804	-	91	89.503	ENSKMAG00000019232	srsf1a	98	83.539	Kryptolebias_marmoratus
ENSSPUG00000000804	-	91	92.265	ENSLBEG00000020864	-	98	85.597	Labrus_bergylta
ENSSPUG00000000804	-	96	82.383	ENSLBEG00000015294	-	98	84.337	Labrus_bergylta
ENSSPUG00000000804	-	96	97.119	ENSLACG00000014160	srsf1a	91	97.119	Latimeria_chalumnae
ENSSPUG00000000804	-	97	98.374	ENSLOCG00000005994	srsf1a	99	98.374	Lepisosteus_oculatus
ENSSPUG00000000804	-	97	98.780	ENSLAFG00000025743	SRSF1	99	98.780	Loxodonta_africana
ENSSPUG00000000804	-	100	98.814	ENSMFAG00000040003	-	100	98.814	Macaca_fascicularis
ENSSPUG00000000804	-	100	98.814	ENSMMUG00000004725	SRSF1	100	98.814	Macaca_mulatta
ENSSPUG00000000804	-	100	96.047	ENSMMUG00000003260	-	100	96.047	Macaca_mulatta
ENSSPUG00000000804	-	100	98.814	ENSMNEG00000027680	-	100	98.814	Macaca_nemestrina
ENSSPUG00000000804	-	100	95.652	ENSMNEG00000015983	-	100	95.652	Macaca_nemestrina
ENSSPUG00000000804	-	100	92.490	ENSMLEG00000015243	-	100	92.095	Mandrillus_leucophaeus
ENSSPUG00000000804	-	97	98.780	ENSMLEG00000040509	SRSF1	99	98.780	Mandrillus_leucophaeus
ENSSPUG00000000804	-	93	86.957	ENSMAMG00000019687	-	100	83.871	Mastacembelus_armatus
ENSSPUG00000000804	-	93	92.935	ENSMAMG00000019691	-	100	87.805	Mastacembelus_armatus
ENSSPUG00000000804	-	91	91.160	ENSMAMG00000018454	-	98	84.774	Mastacembelus_armatus
ENSSPUG00000000804	-	100	98.814	ENSMAUG00000021845	Srsf1	100	98.814	Mesocricetus_auratus
ENSSPUG00000000804	-	100	98.814	ENSMICG00000013639	-	100	98.814	Microcebus_murinus
ENSSPUG00000000804	-	100	98.814	ENSMOCG00000001996	Srsf1	100	98.814	Microtus_ochrogaster
ENSSPUG00000000804	-	91	91.713	ENSMMOG00000014354	srsf1a	98	79.339	Mola_mola
ENSSPUG00000000804	-	94	97.340	ENSMODG00000014781	-	63	98.378	Monodelphis_domestica
ENSSPUG00000000804	-	93	80.435	ENSMALG00000007763	-	79	81.218	Monopterus_albus
ENSSPUG00000000804	-	91	90.608	ENSMALG00000017129	-	75	88.083	Monopterus_albus
ENSSPUG00000000804	-	100	98.814	MGP_CAROLIEiJ_G0016943	Srsf1	100	98.814	Mus_caroli
ENSSPUG00000000804	-	100	98.814	ENSMUSG00000018379	Srsf1	100	98.814	Mus_musculus
ENSSPUG00000000804	-	100	98.814	MGP_PahariEiJ_G0018074	Srsf1	100	98.814	Mus_pahari
ENSSPUG00000000804	-	100	98.814	MGP_SPRETEiJ_G0017790	Srsf1	100	98.814	Mus_spretus
ENSSPUG00000000804	-	97	98.780	ENSMPUG00000015369	SRSF1	99	98.780	Mustela_putorius_furo
ENSSPUG00000000804	-	93	86.413	ENSMLUG00000023995	-	100	89.516	Myotis_lucifugus
ENSSPUG00000000804	-	97	98.780	ENSMLUG00000011040	SRSF1	99	98.780	Myotis_lucifugus
ENSSPUG00000000804	-	97	98.780	ENSNGAG00000011395	Srsf1	99	98.780	Nannospalax_galili
ENSSPUG00000000804	-	97	79.675	ENSNBRG00000008041	srsf1b	80	82.741	Neolamprologus_brichardi
ENSSPUG00000000804	-	100	98.814	ENSNLEG00000008088	-	100	98.814	Nomascus_leucogenys
ENSSPUG00000000804	-	64	98.425	ENSMEUG00000002783	-	100	98.425	Notamacropus_eugenii
ENSSPUG00000000804	-	72	97.268	ENSOPRG00000001234	-	100	97.268	Ochotona_princeps
ENSSPUG00000000804	-	100	98.024	ENSODEG00000011481	-	100	98.024	Octodon_degus
ENSSPUG00000000804	-	91	89.503	ENSONIG00000013160	-	98	84.362	Oreochromis_niloticus
ENSSPUG00000000804	-	93	92.935	ENSONIG00000004860	-	81	91.371	Oreochromis_niloticus
ENSSPUG00000000804	-	96	70.161	ENSOCUG00000010894	-	77	71.282	Oryctolagus_cuniculus
ENSSPUG00000000804	-	91	91.160	ENSORLG00000004580	srsf1a	98	84.774	Oryzias_latipes
ENSSPUG00000000804	-	91	91.160	ENSORLG00020009456	srsf1a	98	84.774	Oryzias_latipes_hni
ENSSPUG00000000804	-	91	91.160	ENSORLG00015014384	srsf1a	98	84.362	Oryzias_latipes_hsok
ENSSPUG00000000804	-	82	90.184	ENSOMEG00000004106	srsf1a	92	82.301	Oryzias_melastigma
ENSSPUG00000000804	-	97	98.780	ENSOGAG00000025950	-	99	98.780	Otolemur_garnettii
ENSSPUG00000000804	-	97	93.902	ENSOARG00000008323	SRSF1	99	93.902	Ovis_aries
ENSSPUG00000000804	-	100	98.814	ENSPPAG00000043403	-	100	98.814	Pan_paniscus
ENSSPUG00000000804	-	100	98.814	ENSPPRG00000004238	-	100	98.814	Panthera_pardus
ENSSPUG00000000804	-	100	98.814	ENSPTRG00000049077	SRSF1	100	98.814	Pan_troglodytes
ENSSPUG00000000804	-	100	75.889	ENSPANG00000030275	-	100	75.494	Papio_anubis
ENSSPUG00000000804	-	100	98.814	ENSPANG00000022305	-	100	98.814	Papio_anubis
ENSSPUG00000000804	-	97	97.154	ENSPKIG00000012857	srsf1b	99	97.154	Paramormyrops_kingsleyae
ENSSPUG00000000804	-	96	96.296	ENSPKIG00000007204	srsf1a	98	96.296	Paramormyrops_kingsleyae
ENSSPUG00000000804	-	93	91.935	ENSPSIG00000009000	-	100	93.200	Pelodiscus_sinensis
ENSSPUG00000000804	-	94	87.435	ENSPMGG00000013112	-	99	85.232	Periophthalmus_magnuspinnatus
ENSSPUG00000000804	-	94	84.519	ENSPMGG00000005467	-	99	85.043	Periophthalmus_magnuspinnatus
ENSSPUG00000000804	-	100	98.814	ENSPEMG00000021416	Srsf1	100	98.814	Peromyscus_maniculatus_bairdii
ENSSPUG00000000804	-	97	98.785	ENSPCIG00000006076	-	99	98.785	Phascolarctos_cinereus
ENSSPUG00000000804	-	92	89.071	ENSPFOG00000018325	-	86	85.306	Poecilia_formosa
ENSSPUG00000000804	-	92	89.071	ENSPLAG00000008416	srsf1b	98	85.306	Poecilia_latipinna
ENSSPUG00000000804	-	63	88.710	ENSPMEG00000020607	-	98	87.805	Poecilia_mexicana
ENSSPUG00000000804	-	92	89.071	ENSPMEG00000002388	-	98	85.306	Poecilia_mexicana
ENSSPUG00000000804	-	63	88.710	ENSPMEG00000014312	-	98	87.805	Poecilia_mexicana
ENSSPUG00000000804	-	93	90.217	ENSPREG00000009667	srsf1a	98	84.774	Poecilia_reticulata
ENSSPUG00000000804	-	100	98.814	ENSPPYG00000008240	SRSF1	100	98.814	Pongo_abelii
ENSSPUG00000000804	-	97	98.780	ENSPCAG00000005199	SRSF1	99	98.780	Procavia_capensis
ENSSPUG00000000804	-	93	74.866	ENSPCOG00000025736	-	95	76.020	Propithecus_coquereli
ENSSPUG00000000804	-	100	98.814	ENSPCOG00000023654	-	100	98.814	Propithecus_coquereli
ENSSPUG00000000804	-	73	100.000	ENSPVAG00000000519	-	74	100.000	Pteropus_vampyrus
ENSSPUG00000000804	-	97	95.528	ENSPNAG00000014601	srsf1b	99	95.528	Pygocentrus_nattereri
ENSSPUG00000000804	-	94	92.513	ENSPNAG00000022241	srsf1a	98	92.181	Pygocentrus_nattereri
ENSSPUG00000000804	-	97	98.780	ENSRNOG00000050323	Srsf1	99	98.780	Rattus_norvegicus
ENSSPUG00000000804	-	100	98.814	ENSRBIG00000034445	-	100	98.814	Rhinopithecus_bieti
ENSSPUG00000000804	-	100	98.814	ENSRROG00000041506	-	100	98.814	Rhinopithecus_roxellana
ENSSPUG00000000804	-	100	98.814	ENSSBOG00000025377	-	100	98.814	Saimiri_boliviensis_boliviensis
ENSSPUG00000000804	-	97	98.785	ENSSHAG00000002552	-	99	98.785	Sarcophilus_harrisii
ENSSPUG00000000804	-	97	97.551	ENSSFOG00015004800	srsf1a	98	97.551	Scleropages_formosus
ENSSPUG00000000804	-	91	91.713	ENSSMAG00000007018	-	98	84.362	Scophthalmus_maximus
ENSSPUG00000000804	-	92	87.500	ENSSMAG00000009719	-	100	86.667	Scophthalmus_maximus
ENSSPUG00000000804	-	91	92.265	ENSSDUG00000011303	-	98	85.597	Seriola_dumerili
ENSSPUG00000000804	-	96	80.000	ENSSDUG00000003929	-	99	77.510	Seriola_dumerili
ENSSPUG00000000804	-	91	92.265	ENSSLDG00000010543	-	98	85.597	Seriola_lalandi_dorsalis
ENSSPUG00000000804	-	93	82.703	ENSSLDG00000016868	-	99	82.258	Seriola_lalandi_dorsalis
ENSSPUG00000000804	-	93	85.484	ENSSLDG00000016895	-	99	76.518	Seriola_lalandi_dorsalis
ENSSPUG00000000804	-	94	97.326	ENSSARG00000010949	-	63	98.370	Sorex_araneus
ENSSPUG00000000804	-	91	90.055	ENSSPAG00000022562	-	98	85.185	Stegastes_partitus
ENSSPUG00000000804	-	93	86.224	ENSSPAG00000014152	-	99	83.398	Stegastes_partitus
ENSSPUG00000000804	-	100	98.814	ENSSSCG00000017626	-	100	98.814	Sus_scrofa
ENSSPUG00000000804	-	73	98.913	ENSTGUG00000008416	-	100	98.913	Taeniopygia_guttata
ENSSPUG00000000804	-	91	91.160	ENSTRUG00000003691	srsf1a	98	84.362	Takifugu_rubripes
ENSSPUG00000000804	-	91	91.160	ENSTNIG00000016223	srsf1a	98	84.362	Tetraodon_nigroviridis
ENSSPUG00000000804	-	94	95.722	ENSTBEG00000015378	-	63	96.739	Tupaia_belangeri
ENSSPUG00000000804	-	72	97.268	ENSTTRG00000007310	SRSF1	100	97.268	Tursiops_truncatus
ENSSPUG00000000804	-	97	98.780	ENSUAMG00000009858	SRSF1	99	98.780	Ursus_americanus
ENSSPUG00000000804	-	100	98.814	ENSUMAG00000000455	-	100	98.814	Ursus_maritimus
ENSSPUG00000000804	-	97	98.374	ENSVPAG00000010094	SRSF1	99	98.374	Vicugna_pacos
ENSSPUG00000000804	-	100	98.814	ENSVVUG00000011882	-	100	98.814	Vulpes_vulpes
ENSSPUG00000000804	-	97	96.341	ENSXETG00000008954	srsf1	99	91.698	Xenopus_tropicalis
ENSSPUG00000000804	-	91	91.160	ENSXMAG00000011766	srsf1a	98	84.774	Xiphophorus_maculatus