EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000000838 (Gene tree)
Gene ID: -
Gene Symbol: RBM28
Alias: FLJ10377
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 16766 bases
Position: chrQEPC01015000.1:763009-779774
Accession: 21863
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000001266	RRM_1	PF00076.22	6.1e-41	1	3
ENSSPUP00000001266	RRM_1	PF00076.22	6.1e-41	2	3
ENSSPUP00000001266	RRM_1	PF00076.22	6.1e-41	3	3
ENSSPUP00000001276	RRM_1	PF00076.22	1.3e-40	1	3
ENSSPUP00000001276	RRM_1	PF00076.22	1.3e-40	2	3
ENSSPUP00000001276	RRM_1	PF00076.22	1.3e-40	3	3
ENSSPUP00000001280	RRM_1	PF00076.22	8.2e-39	1	3
ENSSPUP00000001280	RRM_1	PF00076.22	8.2e-39	2	3
ENSSPUP00000001280	RRM_1	PF00076.22	8.2e-39	3	3
ENSSPUP00000001238	RRM_1	PF00076.22	8.7e-39	1	3
ENSSPUP00000001238	RRM_1	PF00076.22	8.7e-39	2	3
ENSSPUP00000001238	RRM_1	PF00076.22	8.7e-39	3	3
ENSSPUP00000001285	RRM_1	PF00076.22	1.1e-28	1	2
ENSSPUP00000001285	RRM_1	PF00076.22	1.1e-28	2	2
ENSSPUP00000001297	RRM_1	PF00076.22	7e-22	1	2
ENSSPUP00000001297	RRM_1	PF00076.22	7e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000001375	RBM28-206	1584	-	ENSSPUP00000001297	527 (aa)	-	-
ENSSPUT00000001361	RBM28-205	1791	-	ENSSPUP00000001285	519 (aa)	-	-
ENSSPUT00000001341	RBM28-202	1878	-	ENSSPUP00000001266	625 (aa)	-	-
ENSSPUT00000001351	RBM28-203	1713	-	ENSSPUP00000001276	570 (aa)	-	-
ENSSPUT00000001308	RBM28-201	1938	-	ENSSPUP00000001238	645 (aa)	-	-
ENSSPUT00000001356	RBM28-204	1503	-	ENSSPUP00000001280	500 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000000838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000000838's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000000838	RBM28	79	73.529	ENSG00000106344	RBM28	66	73.529	Homo_sapiens
ENSSPUG00000000838	RBM28	78	64.706	ENSAPOG00000015512	rbm28	70	52.489	Acanthochromis_polyacanthus
ENSSPUG00000000838	RBM28	80	73.529	ENSAMEG00000004776	RBM28	82	50.727	Ailuropoda_melanoleuca
ENSSPUG00000000838	RBM28	78	52.019	ENSACIG00000023153	rbm28	91	52.163	Amphilophus_citrinellus
ENSSPUG00000000838	RBM28	77	63.235	ENSAOCG00000000462	rbm28	70	51.236	Amphiprion_ocellaris
ENSSPUG00000000838	RBM28	77	64.706	ENSAPEG00000012996	rbm28	70	51.613	Amphiprion_percula
ENSSPUG00000000838	RBM28	67	66.667	ENSATEG00000001672	rbm28	54	67.713	Anabas_testudineus
ENSSPUG00000000838	RBM28	79	75.000	ENSANAG00000033922	RBM28	66	75.000	Aotus_nancymaae
ENSSPUG00000000838	RBM28	80	60.294	ENSACLG00000025024	rbm28	67	60.294	Astatotilapia_calliptera
ENSSPUG00000000838	RBM28	82	54.608	ENSAMXG00000000763	rbm28	99	55.245	Astyanax_mexicanus
ENSSPUG00000000838	RBM28	78	73.529	ENSBTAG00000017001	RBM28	67	73.529	Bos_taurus
ENSSPUG00000000838	RBM28	79	73.529	ENSCJAG00000017731	RBM28	81	63.326	Callithrix_jacchus
ENSSPUG00000000838	RBM28	86	73.529	ENSCAFG00000001667	RBM28	67	73.529	Canis_familiaris
ENSSPUG00000000838	RBM28	86	73.529	ENSCAFG00020021648	RBM28	67	73.529	Canis_lupus_dingo
ENSSPUG00000000838	RBM28	78	73.529	ENSCHIG00000014146	RBM28	67	73.529	Capra_hircus
ENSSPUG00000000838	RBM28	79	75.000	ENSTSYG00000002892	RBM28	67	75.000	Carlito_syrichta
ENSSPUG00000000838	RBM28	74	75.000	ENSCAPG00000013218	RBM28	66	75.000	Cavia_aperea
ENSSPUG00000000838	RBM28	79	75.000	ENSCPOG00000006253	RBM28	66	75.000	Cavia_porcellus
ENSSPUG00000000838	RBM28	79	75.000	ENSCCAG00000035105	RBM28	66	75.000	Cebus_capucinus
ENSSPUG00000000838	RBM28	79	73.529	ENSCATG00000040497	RBM28	66	73.529	Cercocebus_atys
ENSSPUG00000000838	RBM28	72	75.862	ENSCLAG00000003707	RBM28	64	75.862	Chinchilla_lanigera
ENSSPUG00000000838	RBM28	79	73.529	ENSCSAG00000010161	RBM28	66	73.529	Chlorocebus_sabaeus
ENSSPUG00000000838	RBM28	55	79.528	ENSCPBG00000018088	RBM28	62	80.328	Chrysemys_picta_bellii
ENSSPUG00000000838	RBM28	61	69.767	ENSCING00000009238	-	63	45.361	Ciona_intestinalis
ENSSPUG00000000838	RBM28	61	40.785	ENSCSAVG00000007149	-	94	40.673	Ciona_savignyi
ENSSPUG00000000838	RBM28	79	75.000	ENSCANG00000038397	RBM28	66	75.000	Colobus_angolensis_palliatus
ENSSPUG00000000838	RBM28	80	73.529	ENSCGRG00001021278	Rbm28	64	73.529	Cricetulus_griseus_chok1gshd
ENSSPUG00000000838	RBM28	80	73.529	ENSCGRG00000005098	Rbm28	66	73.529	Cricetulus_griseus_crigri
ENSSPUG00000000838	RBM28	78	63.235	ENSCSEG00000004212	rbm28	68	63.235	Cynoglossus_semilaevis
ENSSPUG00000000838	RBM28	92	55.696	ENSCVAG00000010493	rbm28	67	55.696	Cyprinodon_variegatus
ENSSPUG00000000838	RBM28	91	58.824	ENSDARG00000025332	rbm28	68	58.824	Danio_rerio
ENSSPUG00000000838	RBM28	80	72.059	ENSDNOG00000001124	RBM28	66	72.059	Dasypus_novemcinctus
ENSSPUG00000000838	RBM28	83	62.361	ENSDORG00000004184	Rbm28	85	62.642	Dipodomys_ordii
ENSSPUG00000000838	RBM28	67	35.484	FBgn0260456	CG4806	67	33.682	Drosophila_melanogaster
ENSSPUG00000000838	RBM28	75	76.471	ENSETEG00000007130	RBM28	65	76.471	Echinops_telfairi
ENSSPUG00000000838	RBM28	93	38.710	ENSEBUG00000004419	rbm28	69	50.820	Eptatretus_burgeri
ENSSPUG00000000838	RBM28	79	73.529	ENSEASG00005008528	RBM28	65	73.529	Equus_asinus_asinus
ENSSPUG00000000838	RBM28	79	75.000	ENSECAG00000007745	RBM28	65	75.000	Equus_caballus
ENSSPUG00000000838	RBM28	79	70.588	ENSEEUG00000002389	RBM28	66	70.588	Erinaceus_europaeus
ENSSPUG00000000838	RBM28	78	69.118	ENSELUG00000020602	rbm28	67	69.118	Esox_lucius
ENSSPUG00000000838	RBM28	79	73.529	ENSFCAG00000000946	RBM28	67	73.529	Felis_catus
ENSSPUG00000000838	RBM28	78	70.588	ENSFDAG00000010169	RBM28	67	70.588	Fukomys_damarensis
ENSSPUG00000000838	RBM28	78	61.765	ENSGMOG00000007091	rbm28	70	61.765	Gadus_morhua
ENSSPUG00000000838	RBM28	83	51.868	ENSGAFG00000004802	rbm28	96	51.351	Gambusia_affinis
ENSSPUG00000000838	RBM28	78	66.176	ENSGACG00000012612	rbm28	69	66.176	Gasterosteus_aculeatus
ENSSPUG00000000838	RBM28	73	76.471	ENSGAGG00000008873	RBM28	72	76.471	Gopherus_agassizii
ENSSPUG00000000838	RBM28	79	73.529	ENSGGOG00000004644	RBM28	68	73.529	Gorilla_gorilla
ENSSPUG00000000838	RBM28	75	60.294	ENSHBUG00000009611	rbm28	60	60.294	Haplochromis_burtoni
ENSSPUG00000000838	RBM28	80	75.000	ENSHGLG00000005409	RBM28	67	75.000	Heterocephalus_glaber_female
ENSSPUG00000000838	RBM28	79	75.000	ENSHGLG00100016458	RBM28	67	75.000	Heterocephalus_glaber_male
ENSSPUG00000000838	RBM28	76	53.448	ENSHCOG00000010597	rbm28	61	62.500	Hippocampus_comes
ENSSPUG00000000838	RBM28	79	45.215	ENSIPUG00000007103	rbm28	81	47.606	Ictalurus_punctatus
ENSSPUG00000000838	RBM28	79	73.529	ENSSTOG00000002169	RBM28	65	73.529	Ictidomys_tridecemlineatus
ENSSPUG00000000838	RBM28	74	78.689	ENSJJAG00000022400	Rbm28	68	78.689	Jaculus_jaculus
ENSSPUG00000000838	RBM28	82	52.902	ENSKMAG00000013348	rbm28	68	53.165	Kryptolebias_marmoratus
ENSSPUG00000000838	RBM28	80	63.235	ENSLBEG00000012998	rbm28	65	63.235	Labrus_bergylta
ENSSPUG00000000838	RBM28	56	75.000	ENSLACG00000010485	-	57	75.000	Latimeria_chalumnae
ENSSPUG00000000838	RBM28	85	69.565	ENSLOCG00000015541	rbm28	60	69.565	Lepisosteus_oculatus
ENSSPUG00000000838	RBM28	80	75.000	ENSLAFG00000010717	RBM28	66	75.000	Loxodonta_africana
ENSSPUG00000000838	RBM28	79	73.529	ENSMFAG00000031036	RBM28	66	73.529	Macaca_fascicularis
ENSSPUG00000000838	RBM28	79	73.529	ENSMMUG00000007250	RBM28	66	73.529	Macaca_mulatta
ENSSPUG00000000838	RBM28	79	73.529	ENSMNEG00000036970	RBM28	67	73.529	Macaca_nemestrina
ENSSPUG00000000838	RBM28	79	73.529	ENSMLEG00000037717	RBM28	57	76.761	Mandrillus_leucophaeus
ENSSPUG00000000838	RBM28	80	60.294	ENSMAMG00000008525	rbm28	67	60.294	Mastacembelus_armatus
ENSSPUG00000000838	RBM28	80	60.294	ENSMZEG00005019625	rbm28	72	60.294	Maylandia_zebra
ENSSPUG00000000838	RBM28	79	73.529	ENSMAUG00000002263	Rbm28	64	73.529	Mesocricetus_auratus
ENSSPUG00000000838	RBM28	79	73.529	ENSMICG00000000107	RBM28	69	73.529	Microcebus_murinus
ENSSPUG00000000838	RBM28	79	72.059	ENSMOCG00000014615	Rbm28	67	72.059	Microtus_ochrogaster
ENSSPUG00000000838	RBM28	82	53.009	ENSMMOG00000008600	rbm28	89	52.914	Mola_mola
ENSSPUG00000000838	RBM28	78	75.000	ENSMODG00000015151	RBM28	66	75.000	Monodelphis_domestica
ENSSPUG00000000838	RBM28	83	54.118	ENSMALG00000006419	rbm28	66	60.294	Monopterus_albus
ENSSPUG00000000838	RBM28	91	70.588	MGP_CAROLIEiJ_G0028162	Rbm28	67	70.588	Mus_caroli
ENSSPUG00000000838	RBM28	79	70.588	ENSMUSG00000029701	Rbm28	67	70.588	Mus_musculus
ENSSPUG00000000838	RBM28	80	70.588	MGP_PahariEiJ_G0021920	Rbm28	67	70.588	Mus_pahari
ENSSPUG00000000838	RBM28	79	70.588	MGP_SPRETEiJ_G0029162	Rbm28	67	70.588	Mus_spretus
ENSSPUG00000000838	RBM28	79	73.529	ENSMPUG00000006511	RBM28	66	73.529	Mustela_putorius_furo
ENSSPUG00000000838	RBM28	79	73.529	ENSMLUG00000002186	RBM28	66	73.529	Myotis_lucifugus
ENSSPUG00000000838	RBM28	79	69.118	ENSNGAG00000017946	-	66	69.118	Nannospalax_galili
ENSSPUG00000000838	RBM28	79	69.118	ENSNGAG00000006480	-	68	69.118	Nannospalax_galili
ENSSPUG00000000838	RBM28	80	73.529	ENSNLEG00000012307	RBM28	66	73.529	Nomascus_leucogenys
ENSSPUG00000000838	RBM28	80	75.000	ENSMEUG00000009611	RBM28	69	75.000	Notamacropus_eugenii
ENSSPUG00000000838	RBM28	79	69.118	ENSODEG00000003213	-	66	69.118	Octodon_degus
ENSSPUG00000000838	RBM28	75	77.778	ENSODEG00000013217	-	63	77.778	Octodon_degus
ENSSPUG00000000838	RBM28	80	60.294	ENSONIG00000014924	rbm28	67	60.294	Oreochromis_niloticus
ENSSPUG00000000838	RBM28	81	75.000	ENSOANG00000000815	-	67	75.000	Ornithorhynchus_anatinus
ENSSPUG00000000838	RBM28	80	72.059	ENSOCUG00000003009	RBM28	65	72.059	Oryctolagus_cuniculus
ENSSPUG00000000838	RBM28	80	61.765	ENSORLG00000009636	rbm28	67	61.765	Oryzias_latipes
ENSSPUG00000000838	RBM28	80	61.765	ENSORLG00020002123	rbm28	70	61.765	Oryzias_latipes_hni
ENSSPUG00000000838	RBM28	92	45.391	ENSORLG00015015030	rbm28	73	61.765	Oryzias_latipes_hsok
ENSSPUG00000000838	RBM28	80	61.765	ENSOMEG00000007801	rbm28	68	61.765	Oryzias_melastigma
ENSSPUG00000000838	RBM28	82	62.472	ENSOGAG00000006011	RBM28	69	62.125	Otolemur_garnettii
ENSSPUG00000000838	RBM28	78	73.529	ENSOARG00000002547	RBM28	67	73.529	Ovis_aries
ENSSPUG00000000838	RBM28	79	73.529	ENSPPAG00000041730	RBM28	66	73.529	Pan_paniscus
ENSSPUG00000000838	RBM28	79	73.529	ENSPPRG00000004420	RBM28	67	73.529	Panthera_pardus
ENSSPUG00000000838	RBM28	79	73.529	ENSPTIG00000008550	RBM28	67	73.529	Panthera_tigris_altaica
ENSSPUG00000000838	RBM28	79	73.529	ENSPTRG00000019659	RBM28	66	73.529	Pan_troglodytes
ENSSPUG00000000838	RBM28	79	73.529	ENSPANG00000022295	RBM28	66	73.529	Papio_anubis
ENSSPUG00000000838	RBM28	90	50.214	ENSPKIG00000023453	rbm28	85	43.427	Paramormyrops_kingsleyae
ENSSPUG00000000838	RBM28	76	66.667	ENSPMGG00000012840	rbm28	69	67.647	Periophthalmus_magnuspinnatus
ENSSPUG00000000838	RBM28	76	77.419	ENSPEMG00000020673	Rbm28	68	77.419	Peromyscus_maniculatus_bairdii
ENSSPUG00000000838	RBM28	67	43.307	ENSPMAG00000002948	-	95	44.568	Petromyzon_marinus
ENSSPUG00000000838	RBM28	71	82.258	ENSPCIG00000012810	RBM28	67	75.000	Phascolarctos_cinereus
ENSSPUG00000000838	RBM28	80	55.882	ENSPFOG00000018209	rbm28	67	55.882	Poecilia_formosa
ENSSPUG00000000838	RBM28	81	52.116	ENSPLAG00000016078	rbm28	65	51.899	Poecilia_latipinna
ENSSPUG00000000838	RBM28	80	55.882	ENSPMEG00000004292	rbm28	67	55.882	Poecilia_mexicana
ENSSPUG00000000838	RBM28	80	51.584	ENSPREG00000014287	rbm28	72	51.826	Poecilia_reticulata
ENSSPUG00000000838	RBM28	79	73.529	ENSPPYG00000017975	RBM28	66	73.529	Pongo_abelii
ENSSPUG00000000838	RBM28	65	57.465	ENSPCAG00000008223	RBM28	52	58.310	Procavia_capensis
ENSSPUG00000000838	RBM28	79	72.059	ENSPCOG00000016797	RBM28	65	72.059	Propithecus_coquereli
ENSSPUG00000000838	RBM28	64	78.109	ENSPVAG00000005443	RBM28	52	78.462	Pteropus_vampyrus
ENSSPUG00000000838	RBM28	80	60.294	ENSPNYG00000014003	rbm28	67	60.294	Pundamilia_nyererei
ENSSPUG00000000838	RBM28	79	69.118	ENSRNOG00000005468	Rbm28	67	69.118	Rattus_norvegicus
ENSSPUG00000000838	RBM28	79	75.000	ENSRBIG00000033990	RBM28	66	75.000	Rhinopithecus_bieti
ENSSPUG00000000838	RBM28	79	75.000	ENSRROG00000040747	RBM28	66	75.000	Rhinopithecus_roxellana
ENSSPUG00000000838	RBM28	69	80.000	ENSSBOG00000012308	RBM28	59	82.000	Saimiri_boliviensis_boliviensis
ENSSPUG00000000838	RBM28	79	72.059	ENSSHAG00000017017	RBM28	68	72.059	Sarcophilus_harrisii
ENSSPUG00000000838	RBM28	75	67.647	ENSSFOG00015001231	rbm28	69	67.647	Scleropages_formosus
ENSSPUG00000000838	RBM28	83	49.889	ENSSMAG00000003885	rbm28	88	48.438	Scophthalmus_maximus
ENSSPUG00000000838	RBM28	83	52.463	ENSSDUG00000014270	rbm28	86	52.573	Seriola_dumerili
ENSSPUG00000000838	RBM28	80	63.235	ENSSLDG00000020099	rbm28	66	63.235	Seriola_lalandi_dorsalis
ENSSPUG00000000838	RBM28	72	66.244	ENSSARG00000008303	RBM28	59	67.218	Sorex_araneus
ENSSPUG00000000838	RBM28	78	63.235	ENSSPAG00000023305	rbm28	70	63.235	Stegastes_partitus
ENSSPUG00000000838	RBM28	78	77.941	ENSSSCG00000031847	RBM28	66	77.941	Sus_scrofa
ENSSPUG00000000838	RBM28	80	58.824	ENSTRUG00000013311	rbm28	66	58.824	Takifugu_rubripes
ENSSPUG00000000838	RBM28	80	61.765	ENSTNIG00000017962	rbm28	84	43.038	Tetraodon_nigroviridis
ENSSPUG00000000838	RBM28	78	75.000	ENSTTRG00000013647	RBM28	66	75.000	Tursiops_truncatus
ENSSPUG00000000838	RBM28	80	73.529	ENSUAMG00000006949	RBM28	66	73.529	Ursus_americanus
ENSSPUG00000000838	RBM28	80	73.529	ENSUMAG00000005997	RBM28	66	73.529	Ursus_maritimus
ENSSPUG00000000838	RBM28	79	76.471	ENSVPAG00000008304	RBM28	67	76.471	Vicugna_pacos
ENSSPUG00000000838	RBM28	79	73.529	ENSVVUG00000007270	RBM28	67	73.529	Vulpes_vulpes
ENSSPUG00000000838	RBM28	75	69.512	ENSXETG00000009271	rbm28	57	69.796	Xenopus_tropicalis
ENSSPUG00000000838	RBM28	82	49.889	ENSXCOG00000020357	rbm28	90	49.095	Xiphophorus_couchianus
ENSSPUG00000000838	RBM28	81	52.242	ENSXMAG00000004415	rbm28	68	53.165	Xiphophorus_maculatus