EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000000913 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 364085 bases
Position: chrQEPC01007512.1:6772159-7136243
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000001151	RRM_1	PF00076.22	3.6e-28	1	2
ENSSPUP00000001151	RRM_1	PF00076.22	3.6e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000001217	-	542	-	ENSSPUP00000001151	169 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000000913's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000000913's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000000913	-	83	43.137	ENSSPUG00000015955	HNRNPA2B1	55	43.137
ENSSPUG00000000913	-	83	40.141	ENSSPUG00000016613	HNRNPA0	55	40.141
ENSSPUG00000000913	-	93	78.481	ENSSPUG00000015741	MSI1	54	78.481
ENSSPUG00000000913	-	93	47.134	ENSSPUG00000013700	HNRNPDL	61	47.134
ENSSPUG00000000913	-	89	42.254	ENSSPUG00000010643	-	51	42.254
ENSSPUG00000000913	-	85	42.763	ENSSPUG00000005423	HNRNPA3	52	43.662
ENSSPUG00000000913	-	92	43.871	ENSSPUG00000016806	HNRNPAB	69	43.871
ENSSPUG00000000913	-	81	50.735	ENSSPUG00000013677	HNRNPD	71	50.735

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000000913	-	94	94.304	ENSG00000153944	MSI2	92	93.407	Homo_sapiens
ENSSPUG00000000913	-	94	92.405	ENSAPOG00000001658	msi2a	62	92.405	Acanthochromis_polyacanthus
ENSSPUG00000000913	-	82	95.620	ENSAMEG00000002697	MSI2	52	95.620	Ailuropoda_melanoleuca
ENSSPUG00000000913	-	89	78.000	ENSAOCG00000014822	msi2a	69	78.000	Amphiprion_ocellaris
ENSSPUG00000000913	-	94	92.405	ENSAPEG00000007706	msi2a	55	92.405	Amphiprion_percula
ENSSPUG00000000913	-	94	92.405	ENSATEG00000010498	msi2a	62	92.405	Anabas_testudineus
ENSSPUG00000000913	-	84	89.381	ENSATEG00000003301	-	50	89.381	Anabas_testudineus
ENSSPUG00000000913	-	94	94.304	ENSANAG00000037827	MSI2	70	95.620	Aotus_nancymaae
ENSSPUG00000000913	-	94	92.405	ENSACLG00000007752	msi2a	62	92.405	Astatotilapia_calliptera
ENSSPUG00000000913	-	94	94.304	ENSAMXG00000032796	msi2a	58	94.304	Astyanax_mexicanus
ENSSPUG00000000913	-	94	95.570	ENSAMXG00000010474	msi2b	58	94.891	Astyanax_mexicanus
ENSSPUG00000000913	-	94	91.772	ENSBTAG00000004406	MSI2	59	91.772	Bos_taurus
ENSSPUG00000000913	-	93	65.823	WBGene00003423	msi-1	72	65.823	Caenorhabditis_elegans
ENSSPUG00000000913	-	94	94.304	ENSCJAG00000013998	MSI2	70	95.620	Callithrix_jacchus
ENSSPUG00000000913	-	81	95.041	ENSCAFG00020025620	MSI2	54	92.366	Canis_lupus_dingo
ENSSPUG00000000913	-	94	91.772	ENSCHIG00000016580	MSI2	58	91.772	Capra_hircus
ENSSPUG00000000913	-	81	83.929	ENSCPOG00000034042	MSI2	51	83.929	Cavia_porcellus
ENSSPUG00000000913	-	94	94.304	ENSCCAG00000033927	MSI2	70	95.620	Cebus_capucinus
ENSSPUG00000000913	-	88	95.238	ENSCATG00000040879	MSI2	70	95.620	Cercocebus_atys
ENSSPUG00000000913	-	94	94.304	ENSCLAG00000014325	MSI2	87	90.179	Chinchilla_lanigera
ENSSPUG00000000913	-	94	94.304	ENSCSAG00000005633	MSI2	58	94.304	Chlorocebus_sabaeus
ENSSPUG00000000913	-	67	79.000	ENSCHOG00000008660	MSI2	55	79.000	Choloepus_hoffmanni
ENSSPUG00000000913	-	81	95.876	ENSCPBG00000009942	MSI2	58	95.876	Chrysemys_picta_bellii
ENSSPUG00000000913	-	83	67.785	ENSCSAVG00000010397	-	58	67.785	Ciona_savignyi
ENSSPUG00000000913	-	82	95.620	ENSCANG00000036414	MSI2	70	95.620	Colobus_angolensis_palliatus
ENSSPUG00000000913	-	94	93.671	ENSCGRG00001013330	Msi2	74	92.453	Cricetulus_griseus_chok1gshd
ENSSPUG00000000913	-	82	95.620	ENSCGRG00000003141	Msi2	53	95.620	Cricetulus_griseus_crigri
ENSSPUG00000000913	-	94	92.647	ENSCSEG00000013549	msi2a	77	92.647	Cynoglossus_semilaevis
ENSSPUG00000000913	-	94	90.441	ENSCSEG00000003266	-	57	90.441	Cynoglossus_semilaevis
ENSSPUG00000000913	-	94	92.405	ENSCVAG00000017075	msi2a	62	92.405	Cyprinodon_variegatus
ENSSPUG00000000913	-	94	95.570	ENSDARG00000032614	msi2b	100	99.010	Danio_rerio
ENSSPUG00000000913	-	81	94.915	ENSDNOG00000014501	MSI2	52	94.915	Dasypus_novemcinctus
ENSSPUG00000000913	-	81	98.230	ENSDORG00000028440	-	100	98.230	Dipodomys_ordii
ENSSPUG00000000913	-	90	75.658	FBgn0260943	Rbp6	53	79.630	Drosophila_melanogaster
ENSSPUG00000000913	-	94	94.304	ENSECAG00000011435	MSI2	60	94.304	Equus_caballus
ENSSPUG00000000913	-	66	62.500	ENSEEUG00000007810	MSI2	51	62.500	Erinaceus_europaeus
ENSSPUG00000000913	-	96	92.073	ENSELUG00000001361	msi2b	89	88.667	Esox_lucius
ENSSPUG00000000913	-	94	95.570	ENSELUG00000011747	msi2a	62	87.097	Esox_lucius
ENSSPUG00000000913	-	92	79.487	ENSFCAG00000033787	-	82	79.487	Felis_catus
ENSSPUG00000000913	-	94	94.304	ENSFCAG00000041686	MSI2	92	93.407	Felis_catus
ENSSPUG00000000913	-	82	95.620	ENSFDAG00000016118	MSI2	52	95.620	Fukomys_damarensis
ENSSPUG00000000913	-	94	95.364	ENSFHEG00000000084	msi2a	99	94.231	Fundulus_heteroclitus
ENSSPUG00000000913	-	91	95.192	ENSGMOG00000007596	-	100	95.192	Gadus_morhua
ENSSPUG00000000913	-	94	93.671	ENSGALG00000005567	MSI2	55	93.671	Gallus_gallus
ENSSPUG00000000913	-	94	95.364	ENSGAFG00000006974	msi2a	90	95.364	Gambusia_affinis
ENSSPUG00000000913	-	82	95.620	ENSGGOG00000013182	MSI2	70	95.620	Gorilla_gorilla
ENSSPUG00000000913	-	94	94.853	ENSHBUG00000020800	msi2a	73	94.853	Haplochromis_burtoni
ENSSPUG00000000913	-	91	95.192	ENSHGLG00000012444	MSI2	76	95.192	Heterocephalus_glaber_female
ENSSPUG00000000913	-	81	98.246	ENSHGLG00100004028	-	87	98.246	Heterocephalus_glaber_male
ENSSPUG00000000913	-	94	91.772	ENSHCOG00000000266	msi2a	54	91.772	Hippocampus_comes
ENSSPUG00000000913	-	94	94.304	ENSIPUG00000003732	msi2b	55	94.304	Ictalurus_punctatus
ENSSPUG00000000913	-	94	92.405	ENSIPUG00000021097	msi2a	62	92.405	Ictalurus_punctatus
ENSSPUG00000000913	-	81	83.929	ENSSTOG00000007884	MSI2	51	83.929	Ictidomys_tridecemlineatus
ENSSPUG00000000913	-	81	98.230	ENSJJAG00000009467	-	100	98.230	Jaculus_jaculus
ENSSPUG00000000913	-	94	91.772	ENSKMAG00000009494	msi2a	58	91.772	Kryptolebias_marmoratus
ENSSPUG00000000913	-	94	95.556	ENSLBEG00000007061	msi2a	88	95.556	Labrus_bergylta
ENSSPUG00000000913	-	83	96.703	ENSLACG00000016798	MSI2	98	96.703	Latimeria_chalumnae
ENSSPUG00000000913	-	94	95.570	ENSLOCG00000004675	msi2b	100	86.992	Lepisosteus_oculatus
ENSSPUG00000000913	-	82	95.620	ENSMFAG00000003775	MSI2	70	95.620	Macaca_fascicularis
ENSSPUG00000000913	-	82	95.620	ENSMMUG00000002069	MSI2	70	95.620	Macaca_mulatta
ENSSPUG00000000913	-	94	94.304	ENSMNEG00000045275	MSI2	70	95.620	Macaca_nemestrina
ENSSPUG00000000913	-	82	95.620	ENSMLEG00000033888	MSI2	70	95.620	Mandrillus_leucophaeus
ENSSPUG00000000913	-	94	92.405	ENSMAMG00000010503	msi2a	92	88.000	Mastacembelus_armatus
ENSSPUG00000000913	-	94	94.702	ENSMAMG00000002488	-	99	94.702	Mastacembelus_armatus
ENSSPUG00000000913	-	94	92.405	ENSMZEG00005007676	msi2a	62	92.405	Maylandia_zebra
ENSSPUG00000000913	-	94	93.671	ENSMAUG00000003862	Msi2	55	93.671	Mesocricetus_auratus
ENSSPUG00000000913	-	93	84.177	ENSMICG00000032913	-	62	84.177	Microcebus_murinus
ENSSPUG00000000913	-	94	94.304	ENSMICG00000013598	-	70	95.620	Microcebus_murinus
ENSSPUG00000000913	-	94	93.671	ENSMOCG00000005820	Msi2	55	93.671	Microtus_ochrogaster
ENSSPUG00000000913	-	91	85.621	ENSMMOG00000008348	msi2a	90	85.621	Mola_mola
ENSSPUG00000000913	-	94	92.994	ENSMALG00000000071	msi2a	82	92.143	Monopterus_albus
ENSSPUG00000000913	-	94	93.671	MGP_CAROLIEiJ_G0016948	Msi2	100	98.230	Mus_caroli
ENSSPUG00000000913	-	94	93.671	ENSMUSG00000069769	Msi2	100	98.230	Mus_musculus
ENSSPUG00000000913	-	94	93.671	MGP_PahariEiJ_G0018079	Msi2	100	98.230	Mus_pahari
ENSSPUG00000000913	-	94	93.671	MGP_SPRETEiJ_G0017795	Msi2	100	98.230	Mus_spretus
ENSSPUG00000000913	-	82	95.620	ENSMPUG00000015377	MSI2	54	95.620	Mustela_putorius_furo
ENSSPUG00000000913	-	82	94.891	ENSMLUG00000007865	MSI2	54	94.891	Myotis_lucifugus
ENSSPUG00000000913	-	94	93.671	ENSNGAG00000017807	Msi2	55	93.671	Nannospalax_galili
ENSSPUG00000000913	-	94	94.156	ENSNBRG00000014596	msi2a	93	94.156	Neolamprologus_brichardi
ENSSPUG00000000913	-	82	94.355	ENSNLEG00000008059	MSI2	70	94.355	Nomascus_leucogenys
ENSSPUG00000000913	-	94	94.304	ENSODEG00000011974	MSI2	55	94.304	Octodon_degus
ENSSPUG00000000913	-	95	90.625	ENSONIG00000001972	msi2a	89	90.625	Oreochromis_niloticus
ENSSPUG00000000913	-	82	95.620	ENSOCUG00000010440	MSI2	54	95.620	Oryctolagus_cuniculus
ENSSPUG00000000913	-	94	92.405	ENSORLG00000009671	msi2a	62	92.405	Oryzias_latipes
ENSSPUG00000000913	-	94	92.405	ENSORLG00020021556	msi2a	62	92.405	Oryzias_latipes_hni
ENSSPUG00000000913	-	94	92.405	ENSORLG00015004592	msi2a	62	92.405	Oryzias_latipes_hsok
ENSSPUG00000000913	-	94	92.405	ENSOMEG00000000146	msi2a	62	92.405	Oryzias_melastigma
ENSSPUG00000000913	-	82	92.683	ENSOGAG00000005621	MSI2	55	92.683	Otolemur_garnettii
ENSSPUG00000000913	-	82	95.620	ENSPPAG00000037697	MSI2	70	95.620	Pan_paniscus
ENSSPUG00000000913	-	82	95.620	ENSPPRG00000001848	MSI2	70	95.620	Panthera_pardus
ENSSPUG00000000913	-	93	70.064	ENSPTIG00000021873	-	77	70.064	Panthera_tigris_altaica
ENSSPUG00000000913	-	82	94.355	ENSPTIG00000021678	MSI2	62	94.355	Panthera_tigris_altaica
ENSSPUG00000000913	-	82	95.620	ENSPTRG00000009437	MSI2	70	95.620	Pan_troglodytes
ENSSPUG00000000913	-	94	94.304	ENSPANG00000022319	MSI2	70	95.620	Papio_anubis
ENSSPUG00000000913	-	96	88.957	ENSPKIG00000007038	-	70	88.957	Paramormyrops_kingsleyae
ENSSPUG00000000913	-	83	95.604	ENSPKIG00000017107	-	81	95.604	Paramormyrops_kingsleyae
ENSSPUG00000000913	-	93	82.911	ENSPMGG00000005888	msi2a	56	82.911	Periophthalmus_magnuspinnatus
ENSSPUG00000000913	-	81	98.230	ENSPEMG00000021793	-	100	98.230	Peromyscus_maniculatus_bairdii
ENSSPUG00000000913	-	94	96.835	ENSPCIG00000006063	MSI2	54	96.835	Phascolarctos_cinereus
ENSSPUG00000000913	-	91	93.333	ENSPFOG00000019337	MSI2	91	93.333	Poecilia_formosa
ENSSPUG00000000913	-	94	91.608	ENSPLAG00000000436	msi2a	76	92.254	Poecilia_latipinna
ENSSPUG00000000913	-	85	81.119	ENSPMEG00000013247	msi2a	80	81.119	Poecilia_mexicana
ENSSPUG00000000913	-	94	92.405	ENSPREG00000000881	msi2a	55	82.911	Poecilia_reticulata
ENSSPUG00000000913	-	82	98.462	ENSPCOG00000019195	-	93	98.462	Propithecus_coquereli
ENSSPUG00000000913	-	81	95.122	ENSPVAG00000017053	MSI2	53	95.122	Pteropus_vampyrus
ENSSPUG00000000913	-	94	92.405	ENSPNYG00000018393	msi2a	62	92.405	Pundamilia_nyererei
ENSSPUG00000000913	-	94	93.671	ENSPNAG00000014957	msi2a	58	93.671	Pygocentrus_nattereri
ENSSPUG00000000913	-	94	95.570	ENSPNAG00000000844	msi2b	56	86.076	Pygocentrus_nattereri
ENSSPUG00000000913	-	81	95.370	ENSRNOG00000025338	Msi2	50	95.370	Rattus_norvegicus
ENSSPUG00000000913	-	54	76.923	ENSRBIG00000032064	-	82	76.923	Rhinopithecus_bieti
ENSSPUG00000000913	-	82	98.246	ENSRROG00000034421	-	92	98.246	Rhinopithecus_roxellana
ENSSPUG00000000913	-	82	95.620	ENSSBOG00000026425	MSI2	70	95.620	Saimiri_boliviensis_boliviensis
ENSSPUG00000000913	-	82	96.324	ENSSHAG00000008672	MSI2	86	67.857	Sarcophilus_harrisii
ENSSPUG00000000913	-	84	88.028	ENSSFOG00015021687	-	61	88.028	Scleropages_formosus
ENSSPUG00000000913	-	94	92.405	ENSSMAG00000018484	msi2a	62	92.405	Scophthalmus_maximus
ENSSPUG00000000913	-	94	95.556	ENSSDUG00000014507	msi2a	82	95.556	Seriola_dumerili
ENSSPUG00000000913	-	94	94.040	ENSSDUG00000021968	-	99	94.040	Seriola_dumerili
ENSSPUG00000000913	-	94	92.405	ENSSLDG00000017172	msi2a	62	92.405	Seriola_lalandi_dorsalis
ENSSPUG00000000913	-	54	79.121	ENSSLDG00000021332	-	68	79.121	Seriola_lalandi_dorsalis
ENSSPUG00000000913	-	94	92.405	ENSSPAG00000017793	msi2a	62	92.405	Stegastes_partitus
ENSSPUG00000000913	-	94	94.304	ENSSSCG00000038505	MSI2	62	94.304	Sus_scrofa
ENSSPUG00000000913	-	94	92.405	ENSTRUG00000021248	msi2a	59	81.818	Takifugu_rubripes
ENSSPUG00000000913	-	80	79.259	ENSTBEG00000001241	MSI2	57	79.259	Tupaia_belangeri
ENSSPUG00000000913	-	82	95.620	ENSUAMG00000000700	MSI2	70	95.620	Ursus_americanus
ENSSPUG00000000913	-	81	95.370	ENSUMAG00000000505	MSI2	54	95.370	Ursus_maritimus
ENSSPUG00000000913	-	94	95.041	ENSVVUG00000011783	MSI2	82	92.366	Vulpes_vulpes
ENSSPUG00000000913	-	94	92.405	ENSXMAG00000000608	msi2a	62	92.405	Xiphophorus_maculatus