EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000001082 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 20820 bases
Position: chrQEPC01008495.1:1728549-1749368
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000001397	RIO1	PF01163.22	1.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000001478	-	1107	-	ENSSPUP00000001397	368 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000001082's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000001082's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000001082	-	73	50.836	ENSSPUG00000014936	DAPK2	70	50.836
ENSSPUG00000001082	-	63	33.068	ENSSPUG00000006255	RPS6KA5	62	33.068
ENSSPUG00000001082	-	63	33.333	ENSSPUG00000015605	STK33	91	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000001082	-	63	79.498	ENSACAG00000005337	-	92	79.498	Anolis_carolinensis
ENSSPUG00000001082	-	93	54.054	ENSAMXG00000035647	si:dkey-240h12.4	97	54.054	Astyanax_mexicanus
ENSSPUG00000001082	-	86	51.453	ENSDARG00000034210	si:dkey-240h12.4	94	52.113	Danio_rerio
ENSSPUG00000001082	-	90	49.157	ENSLBEG00000000182	-	97	49.864	Labrus_bergylta
ENSSPUG00000001082	-	89	55.125	ENSLACG00000015056	si:dkey-240h12.4	93	55.125	Latimeria_chalumnae
ENSSPUG00000001082	-	87	54.286	ENSPKIG00000015179	si:dkey-240h12.4	94	55.000	Paramormyrops_kingsleyae
ENSSPUG00000001082	-	88	47.753	ENSPFOG00000016522	si:dkey-240h12.4	96	48.501	Poecilia_formosa
ENSSPUG00000001082	-	64	59.836	ENSPLAG00000002519	si:dkey-240h12.4	84	60.976	Poecilia_latipinna
ENSSPUG00000001082	-	93	52.507	ENSPNAG00000010456	-	97	52.507	Pygocentrus_nattereri
ENSSPUG00000001082	-	86	53.561	ENSSFOG00015020846	si:dkey-240h12.4	94	54.144	Scleropages_formosus