EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000001084 (Gene tree)
Gene ID: -
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 14713 bases
Position: chrQEPC01002242.1:288726-303438
Accession: 25980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000001392	TRM	PF02005.16	6.7e-85	1	2
ENSSPUP00000001392	TRM	PF02005.16	6.7e-85	2	2
ENSSPUP00000001392	Met_10	PF02475.16	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000001472	TRMT1-201	1686	-	ENSSPUP00000001392	561 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000001084's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000001084's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000001084	TRMT1	91	55.137	ENSG00000104907	TRMT1	100	44.503	Homo_sapiens
ENSSPUG00000001084	TRMT1	93	54.181	ENSAMEG00000012598	TRMT1	89	53.846	Ailuropoda_melanoleuca
ENSSPUG00000001084	TRMT1	97	48.911	ENSACIG00000018680	trmt1	95	48.911	Amphilophus_citrinellus
ENSSPUG00000001084	TRMT1	91	52.586	ENSAOCG00000006781	trmt1	86	52.159	Amphiprion_ocellaris
ENSSPUG00000001084	TRMT1	91	52.586	ENSAPEG00000007712	trmt1	86	52.159	Amphiprion_percula
ENSSPUG00000001084	TRMT1	93	52.862	ENSATEG00000001872	trmt1	87	52.445	Anabas_testudineus
ENSSPUG00000001084	TRMT1	92	57.993	ENSACAG00000003825	TRMT1	94	57.653	Anolis_carolinensis
ENSSPUG00000001084	TRMT1	89	58.745	ENSANAG00000023016	TRMT1	93	54.281	Aotus_nancymaae
ENSSPUG00000001084	TRMT1	97	49.026	ENSACLG00000010073	trmt1	99	48.618	Astatotilapia_calliptera
ENSSPUG00000001084	TRMT1	91	50.937	ENSAMXG00000012026	trmt1	87	50.596	Astyanax_mexicanus
ENSSPUG00000001084	TRMT1	87	60.928	ENSBTAG00000019325	TRMT1	73	60.542	Bos_taurus
ENSSPUG00000001084	TRMT1	88	33.207	WBGene00006613	trm-1	94	33.207	Caenorhabditis_elegans
ENSSPUG00000001084	TRMT1	89	58.555	ENSCJAG00000004566	TRMT1	80	57.985	Callithrix_jacchus
ENSSPUG00000001084	TRMT1	91	54.778	ENSCAFG00000017070	TRMT1	91	54.437	Canis_familiaris
ENSSPUG00000001084	TRMT1	94	53.488	ENSCAFG00020005397	TRMT1	90	54.059	Canis_lupus_dingo
ENSSPUG00000001084	TRMT1	93	55.167	ENSCHIG00000013569	TRMT1	90	54.833	Capra_hircus
ENSSPUG00000001084	TRMT1	90	52.000	ENSTSYG00000003207	TRMT1	88	51.652	Carlito_syrichta
ENSSPUG00000001084	TRMT1	84	56.322	ENSCAPG00000003355	TRMT1	95	55.556	Cavia_aperea
ENSSPUG00000001084	TRMT1	94	53.821	ENSCPOG00000011754	TRMT1	88	54.003	Cavia_porcellus
ENSSPUG00000001084	TRMT1	91	53.767	ENSCCAG00000022263	TRMT1	93	53.082	Cebus_capucinus
ENSSPUG00000001084	TRMT1	91	55.308	ENSCATG00000039850	TRMT1	88	54.966	Cercocebus_atys
ENSSPUG00000001084	TRMT1	91	45.624	ENSCATG00000038220	-	90	45.283	Cercocebus_atys
ENSSPUG00000001084	TRMT1	94	53.821	ENSCLAG00000015295	TRMT1	93	51.591	Chinchilla_lanigera
ENSSPUG00000001084	TRMT1	81	59.006	ENSCSAG00000006500	TRMT1	90	58.592	Chlorocebus_sabaeus
ENSSPUG00000001084	TRMT1	94	62.230	ENSCPBG00000023866	TRMT1	83	63.063	Chrysemys_picta_bellii
ENSSPUG00000001084	TRMT1	90	41.308	ENSCING00000002884	-	93	40.935	Ciona_intestinalis
ENSSPUG00000001084	TRMT1	89	39.923	ENSCSAVG00000010927	-	95	39.729	Ciona_savignyi
ENSSPUG00000001084	TRMT1	88	50.198	ENSCANG00000031650	-	79	50.198	Colobus_angolensis_palliatus
ENSSPUG00000001084	TRMT1	90	45.518	ENSCANG00000040631	TRMT1	87	44.580	Colobus_angolensis_palliatus
ENSSPUG00000001084	TRMT1	89	53.927	ENSCGRG00001022594	Trmt1	87	54.276	Cricetulus_griseus_chok1gshd
ENSSPUG00000001084	TRMT1	89	53.927	ENSCGRG00000017732	Trmt1	86	54.276	Cricetulus_griseus_crigri
ENSSPUG00000001084	TRMT1	91	52.414	ENSCSEG00000001643	trmt1	84	55.877	Cynoglossus_semilaevis
ENSSPUG00000001084	TRMT1	91	53.217	ENSCVAG00000011886	trmt1	87	52.787	Cyprinodon_variegatus
ENSSPUG00000001084	TRMT1	91	51.864	ENSDARG00000010978	trmt1	86	51.443	Danio_rerio
ENSSPUG00000001084	TRMT1	86	41.941	ENSDNOG00000048240	-	73	63.566	Dasypus_novemcinctus
ENSSPUG00000001084	TRMT1	91	51.966	ENSDORG00000014298	Trmt1	88	51.624	Dipodomys_ordii
ENSSPUG00000001084	TRMT1	91	39.234	FBgn0032430	CG6388	90	39.234	Drosophila_melanogaster
ENSSPUG00000001084	TRMT1	88	42.300	ENSEBUG00000003449	trmt1	74	41.910	Eptatretus_burgeri
ENSSPUG00000001084	TRMT1	91	55.290	ENSEASG00005004050	TRMT1	91	55.119	Equus_asinus_asinus
ENSSPUG00000001084	TRMT1	91	55.290	ENSECAG00000016149	TRMT1	91	55.119	Equus_caballus
ENSSPUG00000001084	TRMT1	59	45.014	ENSEEUG00000014102	-	89	44.729	Erinaceus_europaeus
ENSSPUG00000001084	TRMT1	90	50.772	ENSELUG00000021659	trmt1	86	50.344	Esox_lucius
ENSSPUG00000001084	TRMT1	87	60.928	ENSFCAG00000000483	TRMT1	86	55.098	Felis_catus
ENSSPUG00000001084	TRMT1	91	54.266	ENSFDAG00000007386	TRMT1	88	53.584	Fukomys_damarensis
ENSSPUG00000001084	TRMT1	94	56.150	ENSFHEG00000012865	trmt1	92	55.856	Fundulus_heteroclitus
ENSSPUG00000001084	TRMT1	89	47.795	ENSGMOG00000006564	trmt1	98	47.880	Gadus_morhua
ENSSPUG00000001084	TRMT1	91	54.017	ENSGAFG00000011862	trmt1	90	54.059	Gambusia_affinis
ENSSPUG00000001084	TRMT1	89	51.568	ENSGACG00000000227	trmt1	91	51.134	Gasterosteus_aculeatus
ENSSPUG00000001084	TRMT1	94	63.177	ENSGAGG00000016432	TRMT1	92	57.461	Gopherus_agassizii
ENSSPUG00000001084	TRMT1	91	55.137	ENSGGOG00000014007	TRMT1	88	54.795	Gorilla_gorilla
ENSSPUG00000001084	TRMT1	87	52.930	ENSHBUG00000008821	trmt1	85	52.930	Haplochromis_burtoni
ENSSPUG00000001084	TRMT1	89	54.783	ENSHGLG00000015972	TRMT1	87	54.340	Heterocephalus_glaber_female
ENSSPUG00000001084	TRMT1	89	55.056	ENSHGLG00100018112	TRMT1	87	54.307	Heterocephalus_glaber_male
ENSSPUG00000001084	TRMT1	89	52.297	ENSHCOG00000009447	trmt1	88	51.943	Hippocampus_comes
ENSSPUG00000001084	TRMT1	96	49.684	ENSIPUG00000002899	trmt1	90	49.604	Ictalurus_punctatus
ENSSPUG00000001084	TRMT1	90	54.483	ENSSTOG00000012531	TRMT1	88	54.138	Ictidomys_tridecemlineatus
ENSSPUG00000001084	TRMT1	94	52.303	ENSJJAG00000017154	Trmt1	92	52.152	Jaculus_jaculus
ENSSPUG00000001084	TRMT1	91	53.621	ENSKMAG00000011809	trmt1	96	52.513	Kryptolebias_marmoratus
ENSSPUG00000001084	TRMT1	97	51.216	ENSLBEG00000012703	trmt1	85	52.504	Labrus_bergylta
ENSSPUG00000001084	TRMT1	88	57.006	ENSLACG00000014585	TRMT1	96	52.641	Latimeria_chalumnae
ENSSPUG00000001084	TRMT1	89	51.625	ENSLOCG00000006479	trmt1	97	51.175	Lepisosteus_oculatus
ENSSPUG00000001084	TRMT1	91	54.452	ENSLAFG00000014072	TRMT1	89	54.110	Loxodonta_africana
ENSSPUG00000001084	TRMT1	91	55.479	ENSMFAG00000033143	TRMT1	88	55.137	Macaca_fascicularis
ENSSPUG00000001084	TRMT1	91	56.216	ENSMMUG00000001167	TRMT1	88	56.490	Macaca_mulatta
ENSSPUG00000001084	TRMT1	91	55.308	ENSMNEG00000037867	TRMT1	88	54.966	Macaca_nemestrina
ENSSPUG00000001084	TRMT1	91	55.137	ENSMLEG00000016142	TRMT1	88	54.795	Mandrillus_leucophaeus
ENSSPUG00000001084	TRMT1	97	51.053	ENSMAMG00000004357	trmt1	89	50.649	Mastacembelus_armatus
ENSSPUG00000001084	TRMT1	97	49.188	ENSMZEG00005014510	trmt1	92	48.780	Maylandia_zebra
ENSSPUG00000001084	TRMT1	92	57.982	ENSMAUG00000011134	Trmt1	82	57.615	Mesocricetus_auratus
ENSSPUG00000001084	TRMT1	88	59.387	ENSMICG00000000793	TRMT1	87	54.655	Microcebus_murinus
ENSSPUG00000001084	TRMT1	89	54.974	ENSMOCG00000015895	Trmt1	86	55.497	Microtus_ochrogaster
ENSSPUG00000001084	TRMT1	91	51.658	ENSMMOG00000011097	trmt1	93	51.309	Mola_mola
ENSSPUG00000001084	TRMT1	92	58.106	ENSMODG00000011619	TRMT1	89	57.741	Monodelphis_domestica
ENSSPUG00000001084	TRMT1	93	54.469	MGP_CAROLIEiJ_G0031304	Trmt1	89	54.132	Mus_caroli
ENSSPUG00000001084	TRMT1	91	54.452	ENSMUSG00000001909	Trmt1	88	54.110	Mus_musculus
ENSSPUG00000001084	TRMT1	93	53.963	MGP_SPRETEiJ_G0032422	Trmt1	89	53.626	Mus_spretus
ENSSPUG00000001084	TRMT1	92	55.008	ENSMPUG00000004210	TRMT1	84	54.669	Mustela_putorius_furo
ENSSPUG00000001084	TRMT1	95	54.605	ENSMLUG00000012809	TRMT1	89	54.276	Myotis_lucifugus
ENSSPUG00000001084	TRMT1	91	53.322	ENSNGAG00000022486	Trmt1	88	52.981	Nannospalax_galili
ENSSPUG00000001084	TRMT1	78	57.944	ENSNBRG00000024376	trmt1	84	57.716	Neolamprologus_brichardi
ENSSPUG00000001084	TRMT1	67	55.000	ENSNLEG00000013019	-	68	60.766	Nomascus_leucogenys
ENSSPUG00000001084	TRMT1	93	53.925	ENSMEUG00000013756	TRMT1	99	53.584	Notamacropus_eugenii
ENSSPUG00000001084	TRMT1	70	59.091	ENSOPRG00000009471	-	64	58.523	Ochotona_princeps
ENSSPUG00000001084	TRMT1	89	55.208	ENSODEG00000010323	TRMT1	87	54.514	Octodon_degus
ENSSPUG00000001084	TRMT1	97	51.948	ENSONIG00000000400	trmt1	96	52.667	Oreochromis_niloticus
ENSSPUG00000001084	TRMT1	84	57.171	ENSOCUG00000021934	TRMT1	94	56.773	Oryctolagus_cuniculus
ENSSPUG00000001084	TRMT1	96	46.926	ENSORLG00000020074	trmt1	95	46.515	Oryzias_latipes
ENSSPUG00000001084	TRMT1	89	51.923	ENSORLG00020007561	trmt1	89	50.953	Oryzias_latipes_hni
ENSSPUG00000001084	TRMT1	89	51.923	ENSORLG00015006547	trmt1	86	51.489	Oryzias_latipes_hsok
ENSSPUG00000001084	TRMT1	95	52.397	ENSOMEG00000019343	trmt1	90	52.542	Oryzias_melastigma
ENSSPUG00000001084	TRMT1	90	54.296	ENSOGAG00000025576	TRMT1	90	54.593	Otolemur_garnettii
ENSSPUG00000001084	TRMT1	68	63.235	ENSOARG00000009397	TRMT1	63	63.000	Ovis_aries
ENSSPUG00000001084	TRMT1	89	49.477	ENSPPRG00000012117	TRMT1	87	49.129	Panthera_pardus
ENSSPUG00000001084	TRMT1	62	51.971	ENSPTIG00000008833	TRMT1	65	64.500	Panthera_tigris_altaica
ENSSPUG00000001084	TRMT1	91	55.137	ENSPTRG00000010557	TRMT1	88	54.795	Pan_troglodytes
ENSSPUG00000001084	TRMT1	91	39.519	ENSPTRG00000050421	-	88	39.726	Pan_troglodytes
ENSSPUG00000001084	TRMT1	91	55.308	ENSPANG00000009247	TRMT1	88	54.966	Papio_anubis
ENSSPUG00000001084	TRMT1	79	48.596	ENSPANG00000034058	-	81	48.156	Papio_anubis
ENSSPUG00000001084	TRMT1	96	52.053	ENSPKIG00000005309	trmt1	90	51.645	Paramormyrops_kingsleyae
ENSSPUG00000001084	TRMT1	92	49.638	ENSPSIG00000008762	TRMT1	80	49.378	Pelodiscus_sinensis
ENSSPUG00000001084	TRMT1	89	53.451	ENSPMGG00000019764	trmt1	90	52.920	Periophthalmus_magnuspinnatus
ENSSPUG00000001084	TRMT1	93	53.477	ENSPEMG00000016247	Trmt1	90	53.808	Peromyscus_maniculatus_bairdii
ENSSPUG00000001084	TRMT1	91	48.776	ENSPMAG00000004329	trmt1	90	48.252	Petromyzon_marinus
ENSSPUG00000001084	TRMT1	96	54.290	ENSPCIG00000019273	TRMT1	94	53.960	Phascolarctos_cinereus
ENSSPUG00000001084	TRMT1	91	54.483	ENSPFOG00000008527	trmt1	89	54.059	Poecilia_formosa
ENSSPUG00000001084	TRMT1	91	55.148	ENSPLAG00000018788	trmt1	87	57.834	Poecilia_latipinna
ENSSPUG00000001084	TRMT1	91	54.483	ENSPMEG00000013120	trmt1	89	54.059	Poecilia_mexicana
ENSSPUG00000001084	TRMT1	93	52.862	ENSPREG00000000211	trmt1	87	52.891	Poecilia_reticulata
ENSSPUG00000001084	TRMT1	91	54.795	ENSPPYG00000009622	TRMT1	88	54.452	Pongo_abelii
ENSSPUG00000001084	TRMT1	90	48.616	ENSPCAG00000003698	TRMT1	88	48.270	Procavia_capensis
ENSSPUG00000001084	TRMT1	90	54.655	ENSPCOG00000008653	TRMT1	87	54.310	Propithecus_coquereli
ENSSPUG00000001084	TRMT1	89	59.316	ENSPVAG00000015076	TRMT1	79	58.935	Pteropus_vampyrus
ENSSPUG00000001084	TRMT1	91	54.145	ENSPNYG00000013960	trmt1	93	53.616	Pundamilia_nyererei
ENSSPUG00000001084	TRMT1	93	50.285	ENSPNAG00000024859	trmt1	92	49.623	Pygocentrus_nattereri
ENSSPUG00000001084	TRMT1	93	53.963	ENSRNOG00000002914	Trmt1	92	53.626	Rattus_norvegicus
ENSSPUG00000001084	TRMT1	88	47.431	ENSRBIG00000037505	-	79	47.431	Rhinopithecus_bieti
ENSSPUG00000001084	TRMT1	91	55.137	ENSRBIG00000038324	TRMT1	88	54.795	Rhinopithecus_bieti
ENSSPUG00000001084	TRMT1	91	55.137	ENSRROG00000028599	TRMT1	88	54.795	Rhinopithecus_roxellana
ENSSPUG00000001084	TRMT1	88	46.813	ENSRROG00000031847	-	78	46.813	Rhinopithecus_roxellana
ENSSPUG00000001084	TRMT1	86	30.726	YDR120C	-	92	30.337	Saccharomyces_cerevisiae
ENSSPUG00000001084	TRMT1	89	58.175	ENSSBOG00000028861	TRMT1	93	53.767	Saimiri_boliviensis_boliviensis
ENSSPUG00000001084	TRMT1	91	54.861	ENSSHAG00000014381	TRMT1	95	54.545	Sarcophilus_harrisii
ENSSPUG00000001084	TRMT1	93	53.242	ENSSFOG00015004139	trmt1	88	51.809	Scleropages_formosus
ENSSPUG00000001084	TRMT1	91	53.596	ENSSMAG00000021136	trmt1	89	51.656	Scophthalmus_maximus
ENSSPUG00000001084	TRMT1	95	51.827	ENSSDUG00000012740	trmt1	90	50.980	Seriola_dumerili
ENSSPUG00000001084	TRMT1	95	51.993	ENSSLDG00000005971	trmt1	90	51.144	Seriola_lalandi_dorsalis
ENSSPUG00000001084	TRMT1	92	54.529	ENSSARG00000005138	TRMT1	96	54.167	Sorex_araneus
ENSSPUG00000001084	TRMT1	91	50.690	ENSSPAG00000007153	trmt1	95	50.259	Stegastes_partitus
ENSSPUG00000001084	TRMT1	92	56.485	ENSSSCG00000013744	TRMT1	92	56.143	Sus_scrofa
ENSSPUG00000001084	TRMT1	88	51.679	ENSTRUG00000010700	trmt1	80	51.402	Takifugu_rubripes
ENSSPUG00000001084	TRMT1	89	52.817	ENSTNIG00000018808	trmt1	97	52.381	Tetraodon_nigroviridis
ENSSPUG00000001084	TRMT1	89	60.456	ENSTTRG00000006379	TRMT1	88	55.479	Tursiops_truncatus
ENSSPUG00000001084	TRMT1	95	54.958	ENSUAMG00000022911	TRMT1	97	53.990	Ursus_americanus
ENSSPUG00000001084	TRMT1	95	53.630	ENSUMAG00000006027	TRMT1	95	53.300	Ursus_maritimus
ENSSPUG00000001084	TRMT1	91	55.137	ENSVVUG00000024177	TRMT1	88	54.795	Vulpes_vulpes
ENSSPUG00000001084	TRMT1	78	58.405	ENSXETG00000033863	TRMT1	92	58.155	Xenopus_tropicalis
ENSSPUG00000001084	TRMT1	91	54.017	ENSXCOG00000015733	trmt1	89	54.059	Xiphophorus_couchianus
ENSSPUG00000001084	TRMT1	91	53.584	ENSXMAG00000013823	trmt1	99	53.793	Xiphophorus_maculatus