EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000001178 (Gene tree)
Gene ID: -
Gene Symbol: PRDM10
Alias: KIAA1231|MGC131802|PFM7
Full Name: PR/SET domain 10
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 74111 bases
Position: chrQEPC01005433.1:5893082-5967192
Accession: 13995
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000001613	zf-C2H2	PF00096.26	1.2e-31	1	4
ENSSPUP00000001613	zf-C2H2	PF00096.26	1.2e-31	2	4
ENSSPUP00000001613	zf-C2H2	PF00096.26	1.2e-31	3	4
ENSSPUP00000001613	zf-C2H2	PF00096.26	1.2e-31	4	4
ENSSPUP00000001605	zf-C2H2	PF00096.26	1.7e-31	1	4
ENSSPUP00000001605	zf-C2H2	PF00096.26	1.7e-31	2	4
ENSSPUP00000001605	zf-C2H2	PF00096.26	1.7e-31	3	4
ENSSPUP00000001605	zf-C2H2	PF00096.26	1.7e-31	4	4
ENSSPUP00000001613	zf-met	PF12874.7	9.6e-06	1	2
ENSSPUP00000001613	zf-met	PF12874.7	9.6e-06	2	2
ENSSPUP00000001605	zf-met	PF12874.7	1e-05	1	2
ENSSPUP00000001605	zf-met	PF12874.7	1e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000001702	PRDM10-202	3264	-	ENSSPUP00000001613	1087 (aa)	-	-
ENSSPUT00000001694	PRDM10-201	3354	-	ENSSPUP00000001605	1117 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000001178's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000001178's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000001178	PRDM10	58	32.479	ENSSPUG00000009941	PRDM5	95	32.479

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000001178	PRDM10	99	83.673	ENSG00000170325	PRDM10	100	85.763	Homo_sapiens
ENSSPUG00000001178	PRDM10	99	84.401	ENSAMEG00000002425	PRDM10	100	76.993	Ailuropoda_melanoleuca
ENSSPUG00000001178	PRDM10	97	93.201	ENSAPLG00000004858	PRDM10	100	88.927	Anas_platyrhynchos
ENSSPUG00000001178	PRDM10	99	63.932	ENSANAG00000022064	PRDM10	100	65.702	Aotus_nancymaae
ENSSPUG00000001178	PRDM10	97	84.883	ENSBTAG00000019001	PRDM10	100	83.890	Bos_taurus
ENSSPUG00000001178	PRDM10	97	85.098	ENSCJAG00000009235	PRDM10	100	82.780	Callithrix_jacchus
ENSSPUG00000001178	PRDM10	99	81.794	ENSCAFG00000010164	PRDM10	100	81.882	Canis_familiaris
ENSSPUG00000001178	PRDM10	99	84.126	ENSCAFG00020010152	PRDM10	100	84.215	Canis_lupus_dingo
ENSSPUG00000001178	PRDM10	99	84.395	ENSCHIG00000026530	PRDM10	100	84.291	Capra_hircus
ENSSPUG00000001178	PRDM10	97	85.487	ENSTSYG00000000544	PRDM10	100	81.803	Carlito_syrichta
ENSSPUG00000001178	PRDM10	99	76.364	ENSCAPG00000017296	PRDM10	100	76.450	Cavia_aperea
ENSSPUG00000001178	PRDM10	97	73.883	ENSCPOG00000000389	PRDM10	98	73.986	Cavia_porcellus
ENSSPUG00000001178	PRDM10	97	84.724	ENSCCAG00000024567	PRDM10	100	81.100	Cebus_capucinus
ENSSPUG00000001178	PRDM10	97	85.272	ENSCATG00000040031	PRDM10	100	83.202	Cercocebus_atys
ENSSPUG00000001178	PRDM10	97	83.193	ENSCLAG00000014605	PRDM10	100	80.308	Chinchilla_lanigera
ENSSPUG00000001178	PRDM10	97	85.272	ENSCSAG00000002202	PRDM10	100	81.771	Chlorocebus_sabaeus
ENSSPUG00000001178	PRDM10	98	94.096	ENSCPBG00000026880	PRDM10	97	89.597	Chrysemys_picta_bellii
ENSSPUG00000001178	PRDM10	97	84.911	ENSCANG00000032669	PRDM10	100	81.357	Colobus_angolensis_palliatus
ENSSPUG00000001178	PRDM10	97	84.754	ENSCGRG00001021647	Prdm10	98	81.613	Cricetulus_griseus_chok1gshd
ENSSPUG00000001178	PRDM10	97	84.754	ENSCGRG00000006562	Prdm10	98	81.613	Cricetulus_griseus_crigri
ENSSPUG00000001178	PRDM10	78	88.028	ENSDNOG00000001366	PRDM10	95	84.194	Dasypus_novemcinctus
ENSSPUG00000001178	PRDM10	97	84.295	ENSDORG00000014292	Prdm10	99	83.832	Dipodomys_ordii
ENSSPUG00000001178	PRDM10	97	85.136	ENSEASG00005022914	PRDM10	100	82.069	Equus_asinus_asinus
ENSSPUG00000001178	PRDM10	97	85.056	ENSECAG00000011499	PRDM10	99	85.620	Equus_caballus
ENSSPUG00000001178	PRDM10	97	84.977	ENSFCAG00000004111	PRDM10	96	81.404	Felis_catus
ENSSPUG00000001178	PRDM10	99	90.048	ENSFALG00000004873	PRDM10	94	89.665	Ficedula_albicollis
ENSSPUG00000001178	PRDM10	97	81.902	ENSFDAG00000017311	PRDM10	100	79.661	Fukomys_damarensis
ENSSPUG00000001178	PRDM10	98	92.127	ENSGALG00000033660	PRDM10	99	88.119	Gallus_gallus
ENSSPUG00000001178	PRDM10	97	62.458	ENSGACG00000012293	prdm10	100	62.489	Gasterosteus_aculeatus
ENSSPUG00000001178	PRDM10	98	92.135	ENSGAGG00000012523	PRDM10	99	87.596	Gopherus_agassizii
ENSSPUG00000001178	PRDM10	97	85.220	ENSGGOG00000015359	PRDM10	100	82.738	Gorilla_gorilla
ENSSPUG00000001178	PRDM10	97	83.024	ENSHGLG00000001106	PRDM10	100	80.170	Heterocephalus_glaber_female
ENSSPUG00000001178	PRDM10	97	83.086	ENSHGLG00100002350	PRDM10	100	80.222	Heterocephalus_glaber_male
ENSSPUG00000001178	PRDM10	97	84.442	ENSSTOG00000002015	PRDM10	100	80.842	Ictidomys_tridecemlineatus
ENSSPUG00000001178	PRDM10	99	73.661	ENSJJAG00000021493	Prdm10	100	74.093	Jaculus_jaculus
ENSSPUG00000001178	PRDM10	99	81.211	ENSLAFG00000031867	PRDM10	100	80.677	Loxodonta_africana
ENSSPUG00000001178	PRDM10	97	85.272	ENSMFAG00000031008	PRDM10	100	83.202	Macaca_fascicularis
ENSSPUG00000001178	PRDM10	97	85.272	ENSMMUG00000017555	PRDM10	100	83.202	Macaca_mulatta
ENSSPUG00000001178	PRDM10	97	85.178	ENSMNEG00000036493	PRDM10	100	83.115	Macaca_nemestrina
ENSSPUG00000001178	PRDM10	92	80.368	ENSMLEG00000042028	PRDM10	99	80.982	Mandrillus_leucophaeus
ENSSPUG00000001178	PRDM10	97	91.596	ENSMGAG00000001112	PRDM10	100	81.856	Meleagris_gallopavo
ENSSPUG00000001178	PRDM10	97	84.522	ENSMICG00000013888	PRDM10	100	81.341	Microcebus_murinus
ENSSPUG00000001178	PRDM10	97	81.978	ENSMOCG00000021853	Prdm10	100	78.711	Microtus_ochrogaster
ENSSPUG00000001178	PRDM10	80	88.549	ENSMODG00000004979	PRDM10	99	88.095	Monodelphis_domestica
ENSSPUG00000001178	PRDM10	99	82.814	ENSMUSG00000042496	Prdm10	100	82.814	Mus_musculus
ENSSPUG00000001178	PRDM10	97	83.868	MGP_SPRETEiJ_G0033061	-	100	80.640	Mus_spretus
ENSSPUG00000001178	PRDM10	97	85.446	ENSMPUG00000008711	PRDM10	99	81.842	Mustela_putorius_furo
ENSSPUG00000001178	PRDM10	97	84.270	ENSMLUG00000013051	PRDM10	100	80.756	Myotis_lucifugus
ENSSPUG00000001178	PRDM10	97	84.659	ENSNGAG00000000580	Prdm10	99	84.471	Nannospalax_galili
ENSSPUG00000001178	PRDM10	97	85.272	ENSNLEG00000007488	PRDM10	100	83.115	Nomascus_leucogenys
ENSSPUG00000001178	PRDM10	97	81.852	ENSODEG00000005309	PRDM10	97	82.937	Octodon_degus
ENSSPUG00000001178	PRDM10	97	83.814	ENSOANG00000000577	-	100	79.216	Ornithorhynchus_anatinus
ENSSPUG00000001178	PRDM10	97	85.338	ENSOCUG00000003736	PRDM10	100	81.810	Oryctolagus_cuniculus
ENSSPUG00000001178	PRDM10	97	83.925	ENSOGAG00000010723	PRDM10	100	80.377	Otolemur_garnettii
ENSSPUG00000001178	PRDM10	97	85.164	ENSOARG00000014507	PRDM10	100	81.051	Ovis_aries
ENSSPUG00000001178	PRDM10	97	85.126	ENSPPAG00000042881	PRDM10	100	82.650	Pan_paniscus
ENSSPUG00000001178	PRDM10	97	84.977	ENSPPRG00000007002	PRDM10	100	80.981	Panthera_pardus
ENSSPUG00000001178	PRDM10	97	84.977	ENSPTIG00000013331	PRDM10	100	80.981	Panthera_tigris_altaica
ENSSPUG00000001178	PRDM10	97	85.220	ENSPTRG00000004477	PRDM10	100	82.738	Pan_troglodytes
ENSSPUG00000001178	PRDM10	97	85.178	ENSPANG00000017470	PRDM10	100	83.115	Papio_anubis
ENSSPUG00000001178	PRDM10	97	82.451	ENSPEMG00000014985	Prdm10	100	79.216	Peromyscus_maniculatus_bairdii
ENSSPUG00000001178	PRDM10	97	85.300	ENSPPYG00000004061	PRDM10	100	81.717	Pongo_abelii
ENSSPUG00000001178	PRDM10	91	77.822	ENSPCAG00000014514	PRDM10	99	76.226	Procavia_capensis
ENSSPUG00000001178	PRDM10	99	63.784	ENSPCOG00000023406	PRDM10	100	66.667	Propithecus_coquereli
ENSSPUG00000001178	PRDM10	97	85.033	ENSPVAG00000012764	PRDM10	100	80.961	Pteropus_vampyrus
ENSSPUG00000001178	PRDM10	97	84.470	ENSRNOG00000007853	Prdm10	100	81.353	Rattus_norvegicus
ENSSPUG00000001178	PRDM10	97	84.831	ENSRBIG00000030924	PRDM10	100	82.707	Rhinopithecus_bieti
ENSSPUG00000001178	PRDM10	97	84.831	ENSRROG00000034334	PRDM10	100	81.288	Rhinopithecus_roxellana
ENSSPUG00000001178	PRDM10	97	84.644	ENSSBOG00000008773	PRDM10	100	82.445	Saimiri_boliviensis_boliviensis
ENSSPUG00000001178	PRDM10	97	88.472	ENSSHAG00000004503	PRDM10	99	83.591	Sarcophilus_harrisii
ENSSPUG00000001178	PRDM10	67	100.000	ENSSARG00000013953	-	66	100.000	Sorex_araneus
ENSSPUG00000001178	PRDM10	97	85.084	ENSSSCG00000015243	PRDM10	99	84.447	Sus_scrofa
ENSSPUG00000001178	PRDM10	97	91.879	ENSTGUG00000000530	PRDM10	100	87.230	Taeniopygia_guttata
ENSSPUG00000001178	PRDM10	92	84.551	ENSTBEG00000007221	PRDM10	94	77.143	Tupaia_belangeri
ENSSPUG00000001178	PRDM10	97	83.708	ENSTTRG00000009189	PRDM10	100	79.296	Tursiops_truncatus
ENSSPUG00000001178	PRDM10	90	86.350	ENSUAMG00000018832	PRDM10	96	86.251	Ursus_americanus
ENSSPUG00000001178	PRDM10	97	85.258	ENSUMAG00000003167	PRDM10	99	85.258	Ursus_maritimus
ENSSPUG00000001178	PRDM10	97	84.695	ENSVVUG00000019878	PRDM10	100	82.312	Vulpes_vulpes
ENSSPUG00000001178	PRDM10	97	75.094	ENSXETG00000032173	PRDM10	89	76.477	Xenopus_tropicalis