EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000001238 (Gene tree)
Gene ID: -
Gene Symbol: CPSF6
Alias: CFIM|CFIM68|CFIM72|HPBRII-4|HPBRII-7
Full Name: cleavage and polyadenylation specific factor 6
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 30438 bases
Position: chrQEPC01006720.1:1417269-1447706
Accession: 13871
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000001636	RRM_1	PF00076.22	8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000001727	CPSF6-201	1840	-	ENSSPUP00000001636	582 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000001238's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000001238's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000001238	CPSF6	95	49.554	ENSSPUG00000019344	CPSF7	73	49.268

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000001238	CPSF6	100	92.955	ENSG00000111605	CPSF6	94	92.559	Homo_sapiens
ENSSPUG00000001238	CPSF6	84	48.230	ENSG00000149532	CPSF7	92	65.546	Homo_sapiens
ENSSPUG00000001238	CPSF6	100	90.582	ENSAMEG00000011781	CPSF6	94	89.331	Ailuropoda_melanoleuca
ENSSPUG00000001238	CPSF6	97	92.730	ENSANAG00000019240	CPSF6	93	92.308	Aotus_nancymaae
ENSSPUG00000001238	CPSF6	76	44.397	ENSANAG00000024635	CPSF7	69	43.662	Aotus_nancymaae
ENSSPUG00000001238	CPSF6	64	79.545	ENSAMXG00000016745	CPSF6	75	79.545	Astyanax_mexicanus
ENSSPUG00000001238	CPSF6	100	92.955	ENSBTAG00000007323	CPSF6	94	92.559	Bos_taurus
ENSSPUG00000001238	CPSF6	78	48.673	ENSBTAG00000015263	CPSF7	71	48.603	Bos_taurus
ENSSPUG00000001238	CPSF6	100	92.955	ENSCJAG00000001798	CPSF6	94	92.559	Callithrix_jacchus
ENSSPUG00000001238	CPSF6	84	48.230	ENSCJAG00000019282	CPSF7	73	65.833	Callithrix_jacchus
ENSSPUG00000001238	CPSF6	98	92.077	ENSCAFG00000000424	CPSF6	94	92.941	Canis_familiaris
ENSSPUG00000001238	CPSF6	78	48.673	ENSCAFG00000016152	CPSF7	71	48.603	Canis_familiaris
ENSSPUG00000001238	CPSF6	78	48.673	ENSCAFG00020012753	CPSF7	71	48.603	Canis_lupus_dingo
ENSSPUG00000001238	CPSF6	100	92.955	ENSCAFG00020016950	CPSF6	94	92.559	Canis_lupus_dingo
ENSSPUG00000001238	CPSF6	100	92.955	ENSCHIG00000010792	CPSF6	94	92.559	Capra_hircus
ENSSPUG00000001238	CPSF6	78	48.673	ENSCHIG00000014655	CPSF7	71	48.603	Capra_hircus
ENSSPUG00000001238	CPSF6	97	92.705	ENSTSYG00000008591	CPSF6	100	84.106	Carlito_syrichta
ENSSPUG00000001238	CPSF6	78	48.673	ENSTSYG00000010138	-	71	48.603	Carlito_syrichta
ENSSPUG00000001238	CPSF6	74	48.230	ENSCAPG00000006384	CPSF7	70	47.059	Cavia_aperea
ENSSPUG00000001238	CPSF6	78	48.230	ENSCPOG00000009980	CPSF7	71	48.603	Cavia_porcellus
ENSSPUG00000001238	CPSF6	100	92.784	ENSCPOG00000015201	CPSF6	94	92.377	Cavia_porcellus
ENSSPUG00000001238	CPSF6	78	48.230	ENSCCAG00000032367	CPSF7	71	48.603	Cebus_capucinus
ENSSPUG00000001238	CPSF6	100	92.955	ENSCCAG00000028149	CPSF6	94	92.559	Cebus_capucinus
ENSSPUG00000001238	CPSF6	100	92.955	ENSCATG00000039288	CPSF6	94	92.559	Cercocebus_atys
ENSSPUG00000001238	CPSF6	84	48.230	ENSCATG00000042801	CPSF7	84	46.569	Cercocebus_atys
ENSSPUG00000001238	CPSF6	97	92.527	ENSCLAG00000010149	CPSF6	94	92.090	Chinchilla_lanigera
ENSSPUG00000001238	CPSF6	78	48.230	ENSCLAG00000003174	CPSF7	71	48.603	Chinchilla_lanigera
ENSSPUG00000001238	CPSF6	84	48.230	ENSCSAG00000006414	CPSF7	84	46.569	Chlorocebus_sabaeus
ENSSPUG00000001238	CPSF6	100	98.969	ENSCPBG00000013322	CPSF6	100	98.969	Chrysemys_picta_bellii
ENSSPUG00000001238	CPSF6	97	92.705	ENSCANG00000037294	CPSF6	94	92.279	Colobus_angolensis_palliatus
ENSSPUG00000001238	CPSF6	67	49.115	ENSCGRG00001020382	Cpsf7	71	48.603	Cricetulus_griseus_chok1gshd
ENSSPUG00000001238	CPSF6	100	92.796	ENSCGRG00001018082	Cpsf6	94	91.667	Cricetulus_griseus_chok1gshd
ENSSPUG00000001238	CPSF6	87	48.387	ENSCGRG00000017954	Cpsf7	84	48.529	Cricetulus_griseus_crigri
ENSSPUG00000001238	CPSF6	99	90.830	ENSCGRG00000016909	Cpsf6	94	91.353	Cricetulus_griseus_crigri
ENSSPUG00000001238	CPSF6	92	68.531	ENSCVAG00000014857	cpsf6	52	75.704	Cyprinodon_variegatus
ENSSPUG00000001238	CPSF6	90	38.095	ENSCVAG00000007392	CPSF7	70	43.293	Cyprinodon_variegatus
ENSSPUG00000001238	CPSF6	78	48.673	ENSDNOG00000018517	CPSF7	73	66.667	Dasypus_novemcinctus
ENSSPUG00000001238	CPSF6	100	92.453	ENSDNOG00000015292	CPSF6	94	91.304	Dasypus_novemcinctus
ENSSPUG00000001238	CPSF6	97	92.540	ENSDORG00000002950	Cpsf6	92	91.353	Dipodomys_ordii
ENSSPUG00000001238	CPSF6	100	77.868	ENSETEG00000002097	CPSF6	100	77.868	Echinops_telfairi
ENSSPUG00000001238	CPSF6	92	47.534	ENSETEG00000003765	CPSF7	71	48.603	Echinops_telfairi
ENSSPUG00000001238	CPSF6	80	61.582	ENSEBUG00000003540	cpsf6	68	66.834	Eptatretus_burgeri
ENSSPUG00000001238	CPSF6	100	92.955	ENSEASG00005008066	CPSF6	94	92.559	Equus_asinus_asinus
ENSSPUG00000001238	CPSF6	78	48.673	ENSEASG00005008196	CPSF7	71	48.603	Equus_asinus_asinus
ENSSPUG00000001238	CPSF6	100	92.955	ENSECAG00000015988	CPSF6	94	92.559	Equus_caballus
ENSSPUG00000001238	CPSF6	63	62.205	ENSECAG00000018521	CPSF7	87	66.667	Equus_caballus
ENSSPUG00000001238	CPSF6	100	92.784	ENSFCAG00000002855	CPSF6	94	92.377	Felis_catus
ENSSPUG00000001238	CPSF6	78	48.673	ENSFCAG00000013677	CPSF7	87	66.667	Felis_catus
ENSSPUG00000001238	CPSF6	97	93.972	ENSFALG00000010157	CPSF6	100	98.868	Ficedula_albicollis
ENSSPUG00000001238	CPSF6	66	46.369	ENSFALG00000011927	CPSF7	76	48.039	Ficedula_albicollis
ENSSPUG00000001238	CPSF6	99	90.345	ENSFDAG00000002281	CPSF6	94	89.800	Fukomys_damarensis
ENSSPUG00000001238	CPSF6	96	39.652	ENSFDAG00000003919	CPSF7	71	48.045	Fukomys_damarensis
ENSSPUG00000001238	CPSF6	50	92.500	ENSGMOG00000012951	cpsf6	53	92.500	Gadus_morhua
ENSSPUG00000001238	CPSF6	67	49.107	ENSGALG00000040962	CPSF7	63	49.020	Gallus_gallus
ENSSPUG00000001238	CPSF6	100	98.969	ENSGAGG00000010228	CPSF6	100	98.969	Gopherus_agassizii
ENSSPUG00000001238	CPSF6	100	92.796	ENSGGOG00000008211	CPSF6	94	91.667	Gorilla_gorilla
ENSSPUG00000001238	CPSF6	100	92.784	ENSHGLG00000000792	CPSF6	94	92.377	Heterocephalus_glaber_female
ENSSPUG00000001238	CPSF6	84	48.673	ENSHGLG00000019090	-	84	47.059	Heterocephalus_glaber_female
ENSSPUG00000001238	CPSF6	97	92.527	ENSHGLG00100013861	CPSF6	94	92.090	Heterocephalus_glaber_male
ENSSPUG00000001238	CPSF6	84	48.673	ENSHGLG00100013933	-	84	48.309	Heterocephalus_glaber_male
ENSSPUG00000001238	CPSF6	78	48.673	ENSSTOG00000007708	CPSF7	71	48.603	Ictidomys_tridecemlineatus
ENSSPUG00000001238	CPSF6	97	92.705	ENSSTOG00000014133	CPSF6	94	92.279	Ictidomys_tridecemlineatus
ENSSPUG00000001238	CPSF6	97	92.376	ENSJJAG00000014647	Cpsf6	94	91.182	Jaculus_jaculus
ENSSPUG00000001238	CPSF6	84	48.673	ENSJJAG00000019390	Cpsf7	84	48.309	Jaculus_jaculus
ENSSPUG00000001238	CPSF6	65	44.937	ENSLACG00000005542	CPSF7	70	44.937	Latimeria_chalumnae
ENSSPUG00000001238	CPSF6	95	87.862	ENSLACG00000008625	CPSF6	94	86.775	Latimeria_chalumnae
ENSSPUG00000001238	CPSF6	68	88.832	ENSLOCG00000016190	cpsf6	66	86.636	Lepisosteus_oculatus
ENSSPUG00000001238	CPSF6	78	48.673	ENSLAFG00000032084	CPSF7	71	48.603	Loxodonta_africana
ENSSPUG00000001238	CPSF6	100	92.955	ENSLAFG00000030413	CPSF6	94	92.559	Loxodonta_africana
ENSSPUG00000001238	CPSF6	78	48.230	ENSMFAG00000001401	CPSF7	71	48.603	Macaca_fascicularis
ENSSPUG00000001238	CPSF6	100	92.955	ENSMFAG00000045318	CPSF6	94	92.559	Macaca_fascicularis
ENSSPUG00000001238	CPSF6	100	92.796	ENSMMUG00000002921	CPSF6	94	91.667	Macaca_mulatta
ENSSPUG00000001238	CPSF6	84	48.230	ENSMMUG00000015280	CPSF7	84	46.569	Macaca_mulatta
ENSSPUG00000001238	CPSF6	84	48.230	ENSMNEG00000029585	CPSF7	84	46.569	Macaca_nemestrina
ENSSPUG00000001238	CPSF6	100	92.955	ENSMNEG00000036311	CPSF6	94	92.559	Macaca_nemestrina
ENSSPUG00000001238	CPSF6	97	92.705	ENSMLEG00000003957	CPSF6	94	92.279	Mandrillus_leucophaeus
ENSSPUG00000001238	CPSF6	75	48.230	ENSMLEG00000031269	CPSF7	69	48.603	Mandrillus_leucophaeus
ENSSPUG00000001238	CPSF6	99	89.236	ENSMGAG00000010552	CPSF6	94	90.772	Meleagris_gallopavo
ENSSPUG00000001238	CPSF6	78	48.673	ENSMAUG00000013020	Cpsf7	71	48.603	Mesocricetus_auratus
ENSSPUG00000001238	CPSF6	100	92.955	ENSMAUG00000013240	Cpsf6	94	92.559	Mesocricetus_auratus
ENSSPUG00000001238	CPSF6	78	48.673	ENSMICG00000013788	CPSF7	71	48.603	Microcebus_murinus
ENSSPUG00000001238	CPSF6	100	92.796	ENSMICG00000007385	-	94	91.667	Microcebus_murinus
ENSSPUG00000001238	CPSF6	78	48.673	ENSMOCG00000000072	Cpsf7	71	48.603	Microtus_ochrogaster
ENSSPUG00000001238	CPSF6	100	92.796	ENSMOCG00000013982	Cpsf6	94	91.667	Microtus_ochrogaster
ENSSPUG00000001238	CPSF6	67	48.661	ENSMODG00000020364	CPSF7	72	50.490	Monodelphis_domestica
ENSSPUG00000001238	CPSF6	76	81.651	ENSMALG00000014908	cpsf6	76	81.567	Monopterus_albus
ENSSPUG00000001238	CPSF6	100	92.955	MGP_CAROLIEiJ_G0015834	Cpsf6	94	92.559	Mus_caroli
ENSSPUG00000001238	CPSF6	78	48.673	MGP_CAROLIEiJ_G0022690	Cpsf7	71	48.603	Mus_caroli
ENSSPUG00000001238	CPSF6	78	48.673	ENSMUSG00000034820	Cpsf7	71	48.603	Mus_musculus
ENSSPUG00000001238	CPSF6	100	92.612	ENSMUSG00000055531	Cpsf6	94	92.196	Mus_musculus
ENSSPUG00000001238	CPSF6	78	48.673	MGP_PahariEiJ_G0014184	Cpsf7	71	48.603	Mus_pahari
ENSSPUG00000001238	CPSF6	81	91.332	MGP_PahariEiJ_G0031253	Cpsf6	94	84.392	Mus_pahari
ENSSPUG00000001238	CPSF6	78	48.673	MGP_SPRETEiJ_G0023604	Cpsf7	71	48.603	Mus_spretus
ENSSPUG00000001238	CPSF6	100	92.612	MGP_SPRETEiJ_G0016657	Cpsf6	94	92.196	Mus_spretus
ENSSPUG00000001238	CPSF6	100	88.336	ENSMPUG00000017502	CPSF6	94	87.591	Mustela_putorius_furo
ENSSPUG00000001238	CPSF6	74	47.788	ENSMPUG00000014163	CPSF7	66	47.343	Mustela_putorius_furo
ENSSPUG00000001238	CPSF6	69	91.489	ENSMLUG00000028728	-	92	93.056	Myotis_lucifugus
ENSSPUG00000001238	CPSF6	84	48.673	ENSMLUG00000013278	CPSF7	84	47.059	Myotis_lucifugus
ENSSPUG00000001238	CPSF6	99	88.793	ENSMLUG00000004172	-	94	87.432	Myotis_lucifugus
ENSSPUG00000001238	CPSF6	100	92.796	ENSNGAG00000015901	Cpsf6	94	91.667	Nannospalax_galili
ENSSPUG00000001238	CPSF6	78	48.673	ENSNGAG00000005031	Cpsf7	71	48.603	Nannospalax_galili
ENSSPUG00000001238	CPSF6	100	92.955	ENSNLEG00000003798	CPSF6	94	92.559	Nomascus_leucogenys
ENSSPUG00000001238	CPSF6	67	48.603	ENSNLEG00000002529	CPSF7	65	48.603	Nomascus_leucogenys
ENSSPUG00000001238	CPSF6	100	84.814	ENSMEUG00000015041	CPSF6	99	84.814	Notamacropus_eugenii
ENSSPUG00000001238	CPSF6	67	48.603	ENSMEUG00000002261	CPSF7	71	48.603	Notamacropus_eugenii
ENSSPUG00000001238	CPSF6	78	46.288	ENSODEG00000002610	CPSF7	72	48.045	Octodon_degus
ENSSPUG00000001238	CPSF6	72	96.954	ENSODEG00000004418	-	77	96.954	Octodon_degus
ENSSPUG00000001238	CPSF6	80	76.159	ENSODEG00000007109	-	67	74.843	Octodon_degus
ENSSPUG00000001238	CPSF6	100	90.909	ENSODEG00000018399	-	100	90.909	Octodon_degus
ENSSPUG00000001238	CPSF6	92	76.217	ENSOANG00000005944	CPSF6	50	87.218	Ornithorhynchus_anatinus
ENSSPUG00000001238	CPSF6	99	39.901	ENSOCUG00000024726	CPSF7	71	48.603	Oryctolagus_cuniculus
ENSSPUG00000001238	CPSF6	82	33.333	ENSORLG00000006495	CPSF7	63	43.939	Oryzias_latipes
ENSSPUG00000001238	CPSF6	81	33.333	ENSORLG00020012657	CPSF7	66	41.667	Oryzias_latipes_hni
ENSSPUG00000001238	CPSF6	73	32.727	ENSORLG00015011091	CPSF7	63	43.939	Oryzias_latipes_hsok
ENSSPUG00000001238	CPSF6	50	43.836	ENSOMEG00000000539	CPSF7	56	42.982	Oryzias_melastigma
ENSSPUG00000001238	CPSF6	67	48.673	ENSOGAG00000027958	CPSF7	66	48.603	Otolemur_garnettii
ENSSPUG00000001238	CPSF6	97	90.426	ENSOGAG00000031988	CPSF6	94	89.118	Otolemur_garnettii
ENSSPUG00000001238	CPSF6	67	48.673	ENSOARG00000012937	CPSF7	65	48.603	Ovis_aries
ENSSPUG00000001238	CPSF6	78	48.230	ENSPPAG00000028232	CPSF7	69	48.603	Pan_paniscus
ENSSPUG00000001238	CPSF6	67	48.673	ENSPPRG00000008538	CPSF7	71	48.603	Panthera_pardus
ENSSPUG00000001238	CPSF6	100	92.784	ENSPPRG00000021620	CPSF6	94	92.377	Panthera_pardus
ENSSPUG00000001238	CPSF6	78	48.673	ENSPTIG00000021699	CPSF7	71	48.603	Panthera_tigris_altaica
ENSSPUG00000001238	CPSF6	91	92.075	ENSPTIG00000004079	CPSF6	94	91.583	Panthera_tigris_altaica
ENSSPUG00000001238	CPSF6	100	92.796	ENSPTRG00000005205	CPSF6	94	91.667	Pan_troglodytes
ENSSPUG00000001238	CPSF6	78	48.230	ENSPTRG00000003742	CPSF7	71	48.603	Pan_troglodytes
ENSSPUG00000001238	CPSF6	100	92.955	ENSPANG00000011641	CPSF6	92	95.082	Papio_anubis
ENSSPUG00000001238	CPSF6	75	48.230	ENSPANG00000006037	CPSF7	68	47.826	Papio_anubis
ENSSPUG00000001238	CPSF6	50	54.135	ENSPKIG00000018054	CPSF7	68	55.285	Paramormyrops_kingsleyae
ENSSPUG00000001238	CPSF6	84	48.673	ENSPEMG00000012648	Cpsf7	84	47.059	Peromyscus_maniculatus_bairdii
ENSSPUG00000001238	CPSF6	97	92.362	ENSPEMG00000007973	Cpsf6	94	91.165	Peromyscus_maniculatus_bairdii
ENSSPUG00000001238	CPSF6	67	48.661	ENSPCIG00000002551	CPSF7	70	69.492	Phascolarctos_cinereus
ENSSPUG00000001238	CPSF6	78	48.230	ENSPPYG00000003188	CPSF7	71	48.603	Pongo_abelii
ENSSPUG00000001238	CPSF6	100	92.784	ENSPPYG00000004756	CPSF6	94	92.377	Pongo_abelii
ENSSPUG00000001238	CPSF6	100	92.624	ENSPCOG00000024384	CPSF6	94	91.486	Propithecus_coquereli
ENSSPUG00000001238	CPSF6	78	48.673	ENSPCOG00000011976	CPSF7	71	48.603	Propithecus_coquereli
ENSSPUG00000001238	CPSF6	78	48.673	ENSPVAG00000010675	CPSF7	71	48.045	Pteropus_vampyrus
ENSSPUG00000001238	CPSF6	57	41.053	ENSPNAG00000015073	CPSF7	79	41.837	Pygocentrus_nattereri
ENSSPUG00000001238	CPSF6	100	92.784	ENSRNOG00000005927	Cpsf6	94	92.377	Rattus_norvegicus
ENSSPUG00000001238	CPSF6	87	49.776	ENSRNOG00000020668	Cpsf7	84	47.059	Rattus_norvegicus
ENSSPUG00000001238	CPSF6	84	48.230	ENSRBIG00000031429	CPSF7	87	65.833	Rhinopithecus_bieti
ENSSPUG00000001238	CPSF6	100	92.624	ENSRBIG00000042827	CPSF6	94	91.486	Rhinopithecus_bieti
ENSSPUG00000001238	CPSF6	78	48.230	ENSRROG00000045009	CPSF7	71	48.603	Rhinopithecus_roxellana
ENSSPUG00000001238	CPSF6	100	92.784	ENSRROG00000042758	CPSF6	94	92.377	Rhinopithecus_roxellana
ENSSPUG00000001238	CPSF6	78	48.230	ENSSBOG00000018431	CPSF7	71	48.603	Saimiri_boliviensis_boliviensis
ENSSPUG00000001238	CPSF6	91	92.264	ENSSBOG00000010652	CPSF6	94	91.784	Saimiri_boliviensis_boliviensis
ENSSPUG00000001238	CPSF6	64	47.982	ENSSHAG00000011964	CPSF7	69	47.059	Sarcophilus_harrisii
ENSSPUG00000001238	CPSF6	71	40.000	ENSSFOG00015010288	cpsf7	74	42.958	Scleropages_formosus
ENSSPUG00000001238	CPSF6	94	95.238	ENSSARG00000006743	CPSF6	88	95.238	Sorex_araneus
ENSSPUG00000001238	CPSF6	100	92.955	ENSSSCG00000038031	CPSF6	94	92.559	Sus_scrofa
ENSSPUG00000001238	CPSF6	78	48.673	ENSSSCG00000013083	CPSF7	73	66.667	Sus_scrofa
ENSSPUG00000001238	CPSF6	64	46.927	ENSTGUG00000006513	CPSF7	71	47.573	Taeniopygia_guttata
ENSSPUG00000001238	CPSF6	63	47.788	ENSTTRG00000011085	CPSF7	70	47.059	Tursiops_truncatus
ENSSPUG00000001238	CPSF6	91	92.264	ENSUAMG00000023492	CPSF6	94	91.784	Ursus_americanus
ENSSPUG00000001238	CPSF6	78	48.673	ENSUAMG00000017809	CPSF7	71	48.603	Ursus_americanus
ENSSPUG00000001238	CPSF6	91	92.264	ENSUMAG00000020779	CPSF6	94	91.784	Ursus_maritimus
ENSSPUG00000001238	CPSF6	84	48.673	ENSUMAG00000011825	CPSF7	84	47.059	Ursus_maritimus
ENSSPUG00000001238	CPSF6	63	62.205	ENSVVUG00000004939	CPSF7	73	66.667	Vulpes_vulpes
ENSSPUG00000001238	CPSF6	97	39.652	ENSXETG00000006715	cpsf7	66	46.734	Xenopus_tropicalis