EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000001401 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD4
Alias: FLJ14494
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 8700 bases
Position: chrQEPC01011926.1:1850334-1859033
Accession: 25898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000001813	PseudoU_synth_2	PF00849.22	4.9e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000001911	RPUSD4-201	1586	-	ENSSPUP00000001813	362 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000001401's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000001401's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000001401	RPUSD4	90	63.692	ENSG00000165526	RPUSD4	88	62.275	Homo_sapiens
ENSSPUG00000001401	RPUSD4	93	50.294	ENSAPOG00000011024	rpusd4	84	49.706	Acanthochromis_polyacanthus
ENSSPUG00000001401	RPUSD4	94	62.059	ENSAMEG00000000127	-	89	61.176	Ailuropoda_melanoleuca
ENSSPUG00000001401	RPUSD4	61	67.742	ENSAMEG00000005953	-	93	67.769	Ailuropoda_melanoleuca
ENSSPUG00000001401	RPUSD4	92	49.408	ENSACIG00000003533	rpusd4	87	52.349	Amphilophus_citrinellus
ENSSPUG00000001401	RPUSD4	90	51.368	ENSAOCG00000015409	rpusd4	74	53.846	Amphiprion_ocellaris
ENSSPUG00000001401	RPUSD4	90	51.672	ENSAPEG00000018935	rpusd4	74	54.181	Amphiprion_percula
ENSSPUG00000001401	RPUSD4	90	50.602	ENSATEG00000008059	rpusd4	74	53.020	Anabas_testudineus
ENSSPUG00000001401	RPUSD4	77	70.609	ENSAPLG00000013250	RPUSD4	95	70.758	Anas_platyrhynchos
ENSSPUG00000001401	RPUSD4	93	71.006	ENSACAG00000000189	RPUSD4	92	70.414	Anolis_carolinensis
ENSSPUG00000001401	RPUSD4	94	62.647	ENSANAG00000024050	RPUSD4	90	62.353	Aotus_nancymaae
ENSSPUG00000001401	RPUSD4	90	52.424	ENSACLG00000020996	rpusd4	83	52.121	Astatotilapia_calliptera
ENSSPUG00000001401	RPUSD4	98	49.451	ENSAMXG00000031479	rpusd4	94	49.030	Astyanax_mexicanus
ENSSPUG00000001401	RPUSD4	92	64.688	ENSBTAG00000020900	RPUSD4	88	64.392	Bos_taurus
ENSSPUG00000001401	RPUSD4	92	64.583	ENSCJAG00000042850	RPUSD4	84	64.286	Callithrix_jacchus
ENSSPUG00000001401	RPUSD4	92	63.393	ENSCAFG00000010488	RPUSD4	89	60.882	Canis_familiaris
ENSSPUG00000001401	RPUSD4	92	63.393	ENSCAFG00020010621	RPUSD4	89	60.882	Canis_lupus_dingo
ENSSPUG00000001401	RPUSD4	91	62.805	ENSCHIG00000009975	RPUSD4	88	62.130	Capra_hircus
ENSSPUG00000001401	RPUSD4	94	62.941	ENSTSYG00000008456	RPUSD4	89	62.647	Carlito_syrichta
ENSSPUG00000001401	RPUSD4	68	63.563	ENSCAPG00000006040	RPUSD4	95	63.563	Cavia_aperea
ENSSPUG00000001401	RPUSD4	94	63.529	ENSCPOG00000014971	RPUSD4	89	62.941	Cavia_porcellus
ENSSPUG00000001401	RPUSD4	92	64.881	ENSCCAG00000027838	RPUSD4	91	63.743	Cebus_capucinus
ENSSPUG00000001401	RPUSD4	99	57.618	ENSCATG00000041570	RPUSD4	89	60.000	Cercocebus_atys
ENSSPUG00000001401	RPUSD4	94	61.471	ENSCLAG00000016553	RPUSD4	89	60.882	Chinchilla_lanigera
ENSSPUG00000001401	RPUSD4	92	62.575	ENSCSAG00000002274	RPUSD4	88	62.275	Chlorocebus_sabaeus
ENSSPUG00000001401	RPUSD4	75	67.647	ENSCHOG00000010249	RPUSD4	95	67.647	Choloepus_hoffmanni
ENSSPUG00000001401	RPUSD4	79	76.842	ENSCPBG00000011175	RPUSD4	96	77.419	Chrysemys_picta_bellii
ENSSPUG00000001401	RPUSD4	75	42.294	ENSCSAVG00000000872	-	54	42.294	Ciona_savignyi
ENSSPUG00000001401	RPUSD4	93	61.243	ENSCANG00000039684	RPUSD4	91	60.116	Colobus_angolensis_palliatus
ENSSPUG00000001401	RPUSD4	96	62.139	ENSCGRG00001024141	Rpusd4	91	61.561	Cricetulus_griseus_chok1gshd
ENSSPUG00000001401	RPUSD4	96	62.139	ENSCGRG00000014415	Rpusd4	91	61.561	Cricetulus_griseus_crigri
ENSSPUG00000001401	RPUSD4	53	42.211	ENSCSEG00000006462	-	84	41.538	Cynoglossus_semilaevis
ENSSPUG00000001401	RPUSD4	90	54.878	ENSCVAG00000000392	rpusd4	84	57.576	Cyprinodon_variegatus
ENSSPUG00000001401	RPUSD4	90	54.573	ENSCVAG00000008761	rpusd4	93	50.546	Cyprinodon_variegatus
ENSSPUG00000001401	RPUSD4	95	48.857	ENSDARG00000012674	rpusd4	97	48.571	Danio_rerio
ENSSPUG00000001401	RPUSD4	91	64.024	ENSDNOG00000020026	RPUSD4	86	63.415	Dasypus_novemcinctus
ENSSPUG00000001401	RPUSD4	94	61.047	ENSDORG00000016717	Rpusd4	89	60.294	Dipodomys_ordii
ENSSPUG00000001401	RPUSD4	93	63.050	ENSETEG00000013953	RPUSD4	90	62.463	Echinops_telfairi
ENSSPUG00000001401	RPUSD4	92	63.095	ENSEASG00005022982	RPUSD4	88	62.500	Equus_asinus_asinus
ENSSPUG00000001401	RPUSD4	92	63.095	ENSECAG00000000557	RPUSD4	88	62.500	Equus_caballus
ENSSPUG00000001401	RPUSD4	77	63.687	ENSEEUG00000014036	RPUSD4	72	63.687	Erinaceus_europaeus
ENSSPUG00000001401	RPUSD4	93	55.202	ENSELUG00000008075	rpusd4	78	59.667	Esox_lucius
ENSSPUG00000001401	RPUSD4	95	61.671	ENSFCAG00000029789	RPUSD4	91	60.807	Felis_catus
ENSSPUG00000001401	RPUSD4	93	65.385	ENSFALG00000005171	RPUSD4	99	64.793	Ficedula_albicollis
ENSSPUG00000001401	RPUSD4	92	63.393	ENSFDAG00000014307	RPUSD4	90	60.882	Fukomys_damarensis
ENSSPUG00000001401	RPUSD4	98	50.552	ENSFHEG00000004329	rpusd4	93	50.000	Fundulus_heteroclitus
ENSSPUG00000001401	RPUSD4	90	49.848	ENSGMOG00000017726	rpusd4	89	51.839	Gadus_morhua
ENSSPUG00000001401	RPUSD4	92	63.095	ENSGALG00000024326	RPUSD4	95	62.941	Gallus_gallus
ENSSPUG00000001401	RPUSD4	90	51.212	ENSGAFG00000021559	rpusd4	75	53.872	Gambusia_affinis
ENSSPUG00000001401	RPUSD4	81	53.041	ENSGACG00000001657	rpusd4	97	51.786	Gasterosteus_aculeatus
ENSSPUG00000001401	RPUSD4	99	70.833	ENSGAGG00000000132	RPUSD4	99	70.000	Gopherus_agassizii
ENSSPUG00000001401	RPUSD4	90	64.308	ENSGGOG00000016494	RPUSD4	89	61.765	Gorilla_gorilla
ENSSPUG00000001401	RPUSD4	90	52.424	ENSHBUG00000022838	rpusd4	83	52.121	Haplochromis_burtoni
ENSSPUG00000001401	RPUSD4	92	63.988	ENSHGLG00000002285	RPUSD4	89	61.176	Heterocephalus_glaber_female
ENSSPUG00000001401	RPUSD4	92	63.988	ENSHGLG00100006385	RPUSD4	89	61.176	Heterocephalus_glaber_male
ENSSPUG00000001401	RPUSD4	94	50.437	ENSHCOG00000006612	rpusd4	86	50.437	Hippocampus_comes
ENSSPUG00000001401	RPUSD4	94	54.728	ENSIPUG00000023879	rusd4	90	53.868	Ictalurus_punctatus
ENSSPUG00000001401	RPUSD4	92	63.988	ENSSTOG00000025280	RPUSD4	91	63.690	Ictidomys_tridecemlineatus
ENSSPUG00000001401	RPUSD4	95	61.690	ENSJJAG00000018673	Rpusd4	94	61.190	Jaculus_jaculus
ENSSPUG00000001401	RPUSD4	91	52.212	ENSKMAG00000021805	rpusd4	77	55.743	Kryptolebias_marmoratus
ENSSPUG00000001401	RPUSD4	92	51.335	ENSLBEG00000020394	rpusd4	83	54.362	Labrus_bergylta
ENSSPUG00000001401	RPUSD4	90	62.462	ENSLACG00000011028	RPUSD4	81	62.154	Latimeria_chalumnae
ENSSPUG00000001401	RPUSD4	97	49.577	ENSLOCG00000003124	rpusd4	94	49.014	Lepisosteus_oculatus
ENSSPUG00000001401	RPUSD4	92	64.583	ENSLAFG00000005211	RPUSD4	100	57.877	Loxodonta_africana
ENSSPUG00000001401	RPUSD4	93	61.243	ENSMFAG00000039513	RPUSD4	89	60.588	Macaca_fascicularis
ENSSPUG00000001401	RPUSD4	93	61.538	ENSMMUG00000007933	RPUSD4	89	60.882	Macaca_mulatta
ENSSPUG00000001401	RPUSD4	93	61.243	ENSMNEG00000027414	RPUSD4	89	60.588	Macaca_nemestrina
ENSSPUG00000001401	RPUSD4	93	61.243	ENSMLEG00000042461	RPUSD4	89	60.588	Mandrillus_leucophaeus
ENSSPUG00000001401	RPUSD4	90	50.151	ENSMAMG00000023839	rpusd4	77	52.349	Mastacembelus_armatus
ENSSPUG00000001401	RPUSD4	90	52.424	ENSMZEG00005011999	rpusd4	83	52.121	Maylandia_zebra
ENSSPUG00000001401	RPUSD4	77	71.429	ENSMGAG00000000840	RPUSD4	87	71.429	Meleagris_gallopavo
ENSSPUG00000001401	RPUSD4	94	62.573	ENSMAUG00000010280	Rpusd4	90	61.988	Mesocricetus_auratus
ENSSPUG00000001401	RPUSD4	93	62.426	ENSMICG00000015979	RPUSD4	90	66.667	Microcebus_murinus
ENSSPUG00000001401	RPUSD4	94	61.337	ENSMOCG00000000661	Rpusd4	90	61.111	Microtus_ochrogaster
ENSSPUG00000001401	RPUSD4	88	52.025	ENSMMOG00000021731	rpusd4	88	54.027	Mola_mola
ENSSPUG00000001401	RPUSD4	89	65.231	ENSMODG00000004521	RPUSD4	83	64.615	Monodelphis_domestica
ENSSPUG00000001401	RPUSD4	85	51.935	ENSMALG00000005839	rpusd4	90	53.356	Monopterus_albus
ENSSPUG00000001401	RPUSD4	96	61.850	MGP_CAROLIEiJ_G0031954	Rpusd4	91	61.272	Mus_caroli
ENSSPUG00000001401	RPUSD4	96	61.561	ENSMUSG00000032044	Rpusd4	91	60.983	Mus_musculus
ENSSPUG00000001401	RPUSD4	96	62.139	MGP_PahariEiJ_G0014819	Rpusd4	91	61.561	Mus_pahari
ENSSPUG00000001401	RPUSD4	96	61.850	MGP_SPRETEiJ_G0033078	Rpusd4	91	61.272	Mus_spretus
ENSSPUG00000001401	RPUSD4	96	60.983	ENSMPUG00000006608	RPUSD4	91	60.405	Mustela_putorius_furo
ENSSPUG00000001401	RPUSD4	92	64.793	ENSMLUG00000017328	-	88	64.286	Myotis_lucifugus
ENSSPUG00000001401	RPUSD4	71	66.016	ENSMLUG00000029348	-	100	66.016	Myotis_lucifugus
ENSSPUG00000001401	RPUSD4	96	64.000	ENSNGAG00000020847	Rpusd4	91	63.584	Nannospalax_galili
ENSSPUG00000001401	RPUSD4	91	51.652	ENSNBRG00000005207	rpusd4	95	51.351	Neolamprologus_brichardi
ENSSPUG00000001401	RPUSD4	94	61.696	ENSNLEG00000007465	RPUSD4	89	61.176	Nomascus_leucogenys
ENSSPUG00000001401	RPUSD4	97	64.045	ENSMEUG00000004370	RPUSD4	95	63.483	Notamacropus_eugenii
ENSSPUG00000001401	RPUSD4	94	61.176	ENSODEG00000004577	RPUSD4	89	60.294	Octodon_degus
ENSSPUG00000001401	RPUSD4	93	51.613	ENSONIG00000018879	rpusd4	90	51.320	Oreochromis_niloticus
ENSSPUG00000001401	RPUSD4	80	66.102	ENSOANG00000007247	RPUSD4	94	65.993	Ornithorhynchus_anatinus
ENSSPUG00000001401	RPUSD4	92	64.095	ENSOCUG00000017039	RPUSD4	88	63.501	Oryctolagus_cuniculus
ENSSPUG00000001401	RPUSD4	94	50.146	ENSORLG00000002750	rpusd4	82	54.054	Oryzias_latipes
ENSSPUG00000001401	RPUSD4	93	49.853	ENSORLG00020002044	rpusd4	74	53.716	Oryzias_latipes_hni
ENSSPUG00000001401	RPUSD4	93	50.437	ENSORLG00015020034	rpusd4	74	54.054	Oryzias_latipes_hsok
ENSSPUG00000001401	RPUSD4	81	55.068	ENSOMEG00000004861	rpusd4	73	55.068	Oryzias_melastigma
ENSSPUG00000001401	RPUSD4	90	64.198	ENSOGAG00000008922	RPUSD4	89	61.357	Otolemur_garnettii
ENSSPUG00000001401	RPUSD4	91	63.110	ENSOARG00000012238	RPUSD4	88	62.426	Ovis_aries
ENSSPUG00000001401	RPUSD4	90	63.692	ENSPPAG00000042883	RPUSD4	88	58.172	Pan_paniscus
ENSSPUG00000001401	RPUSD4	95	61.960	ENSPPRG00000003081	RPUSD4	91	61.095	Panthera_pardus
ENSSPUG00000001401	RPUSD4	95	61.960	ENSPTIG00000012059	RPUSD4	91	61.095	Panthera_tigris_altaica
ENSSPUG00000001401	RPUSD4	90	63.692	ENSPTRG00000004454	RPUSD4	95	58.172	Pan_troglodytes
ENSSPUG00000001401	RPUSD4	93	61.243	ENSPANG00000015040	RPUSD4	89	60.588	Papio_anubis
ENSSPUG00000001401	RPUSD4	93	59.467	ENSPKIG00000023986	rpusd4	86	59.467	Paramormyrops_kingsleyae
ENSSPUG00000001401	RPUSD4	83	77.333	ENSPSIG00000014268	RPUSD4	95	77.181	Pelodiscus_sinensis
ENSSPUG00000001401	RPUSD4	95	49.153	ENSPMGG00000002806	rpusd4	83	53.020	Periophthalmus_magnuspinnatus
ENSSPUG00000001401	RPUSD4	94	56.765	ENSPEMG00000000278	Rpusd4	88	56.176	Peromyscus_maniculatus_bairdii
ENSSPUG00000001401	RPUSD4	85	44.379	ENSPMAG00000008183	rpusd4	96	43.976	Petromyzon_marinus
ENSSPUG00000001401	RPUSD4	99	62.740	ENSPCIG00000010212	RPUSD4	92	64.118	Phascolarctos_cinereus
ENSSPUG00000001401	RPUSD4	98	48.780	ENSPFOG00000019030	rpusd4	96	49.051	Poecilia_formosa
ENSSPUG00000001401	RPUSD4	98	49.319	ENSPLAG00000016848	rpusd4	93	49.591	Poecilia_latipinna
ENSSPUG00000001401	RPUSD4	98	49.322	ENSPMEG00000017534	rpusd4	93	49.046	Poecilia_mexicana
ENSSPUG00000001401	RPUSD4	93	49.143	ENSPREG00000005689	rpusd4	72	55.160	Poecilia_reticulata
ENSSPUG00000001401	RPUSD4	93	61.834	ENSPPYG00000004043	RPUSD4	89	61.176	Pongo_abelii
ENSSPUG00000001401	RPUSD4	75	62.011	ENSPCAG00000000753	RPUSD4	72	62.011	Procavia_capensis
ENSSPUG00000001401	RPUSD4	94	57.059	ENSPCOG00000020694	RPUSD4	90	56.471	Propithecus_coquereli
ENSSPUG00000001401	RPUSD4	98	59.831	ENSPVAG00000000988	RPUSD4	93	59.270	Pteropus_vampyrus
ENSSPUG00000001401	RPUSD4	90	53.030	ENSPNYG00000009652	rpusd4	83	52.727	Pundamilia_nyererei
ENSSPUG00000001401	RPUSD4	93	52.339	ENSPNAG00000012264	rpusd4	89	52.047	Pygocentrus_nattereri
ENSSPUG00000001401	RPUSD4	94	62.353	ENSRNOG00000011567	Rpusd4	89	61.765	Rattus_norvegicus
ENSSPUG00000001401	RPUSD4	93	61.493	ENSRBIG00000034842	RPUSD4	89	60.588	Rhinopithecus_bieti
ENSSPUG00000001401	RPUSD4	93	61.493	ENSRROG00000039753	RPUSD4	89	60.588	Rhinopithecus_roxellana
ENSSPUG00000001401	RPUSD4	95	62.784	ENSSBOG00000030413	RPUSD4	94	62.500	Saimiri_boliviensis_boliviensis
ENSSPUG00000001401	RPUSD4	84	68.750	ENSSHAG00000008304	RPUSD4	99	68.667	Sarcophilus_harrisii
ENSSPUG00000001401	RPUSD4	92	57.612	ENSSFOG00015006203	rpusd4	91	57.313	Scleropages_formosus
ENSSPUG00000001401	RPUSD4	92	52.199	ENSSMAG00000020978	rpusd4	78	55.705	Scophthalmus_maximus
ENSSPUG00000001401	RPUSD4	98	48.315	ENSSDUG00000013399	rpusd4	78	53.691	Seriola_dumerili
ENSSPUG00000001401	RPUSD4	98	48.315	ENSSLDG00000023507	rpusd4	78	53.691	Seriola_lalandi_dorsalis
ENSSPUG00000001401	RPUSD4	91	52.266	ENSSPAG00000012163	rpusd4	76	55.184	Stegastes_partitus
ENSSPUG00000001401	RPUSD4	94	60.588	ENSSSCG00000015233	RPUSD4	89	60.000	Sus_scrofa
ENSSPUG00000001401	RPUSD4	83	70.333	ENSTGUG00000000773	RPUSD4	99	70.370	Taeniopygia_guttata
ENSSPUG00000001401	RPUSD4	94	50.578	ENSTRUG00000012283	rpusd4	87	49.709	Takifugu_rubripes
ENSSPUG00000001401	RPUSD4	91	51.205	ENSTNIG00000014676	rpusd4	76	53.333	Tetraodon_nigroviridis
ENSSPUG00000001401	RPUSD4	94	60.882	ENSTTRG00000001555	RPUSD4	89	60.294	Tursiops_truncatus
ENSSPUG00000001401	RPUSD4	94	62.059	ENSUMAG00000002219	RPUSD4	89	61.176	Ursus_maritimus
ENSSPUG00000001401	RPUSD4	66	59.833	ENSVPAG00000001066	RPUSD4	89	58.506	Vicugna_pacos
ENSSPUG00000001401	RPUSD4	92	63.393	ENSVVUG00000020101	RPUSD4	89	60.882	Vulpes_vulpes
ENSSPUG00000001401	RPUSD4	90	52.121	ENSXCOG00000004676	rpusd4	77	54.545	Xiphophorus_couchianus
ENSSPUG00000001401	RPUSD4	90	52.121	ENSXMAG00000023351	rpusd4	75	54.882	Xiphophorus_maculatus