EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000001533 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 29615 bases
Position: chrQEPC01012438.1:609061-638675
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000002021	MMR_HSR1	PF01926.23	4.3e-05	1	1
ENSSPUP00000002029	MMR_HSR1	PF01926.23	8.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000002137	-	636	-	ENSSPUP00000002021	211 (aa)	-	-
ENSSPUT00000002145	-	636	-	ENSSPUP00000002029	211 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000001533's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000001533's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000001533	-	59	40.000	ENSSPUG00000015409	RAB17	57	40.000
ENSSPUG00000001533	-	73	38.961	ENSSPUG00000016258	RAB35	76	38.961
ENSSPUG00000001533	-	69	38.356	ENSSPUG00000006274	RAB23	66	38.608
ENSSPUG00000001533	-	71	32.667	ENSSPUG00000018789	-	79	32.667
ENSSPUG00000001533	-	93	37.245	ENSSPUG00000000017	RAB22A	98	37.245
ENSSPUG00000001533	-	76	42.857	ENSSPUG00000006349	RAB30	79	42.857
ENSSPUG00000001533	-	62	30.303	ENSSPUG00000008413	ARL4A	65	30.303
ENSSPUG00000001533	-	75	38.125	ENSSPUG00000003222	RAB12	82	34.615
ENSSPUG00000001533	-	73	34.839	ENSSPUG00000013698	RAB11A	76	34.839
ENSSPUG00000001533	-	76	38.509	ENSSPUG00000010896	-	78	38.509
ENSSPUG00000001533	-	92	35.821	ENSSPUG00000004262	RAB7A	96	35.821
ENSSPUG00000001533	-	87	33.333	ENSSPUG00000003459	-	94	33.333
ENSSPUG00000001533	-	79	38.596	ENSSPUG00000017677	-	83	38.596
ENSSPUG00000001533	-	87	33.333	ENSSPUG00000013564	-	94	33.333
ENSSPUG00000001533	-	79	33.708	ENSSPUG00000017531	RAB9B	87	33.708
ENSSPUG00000001533	-	73	40.373	ENSSPUG00000015007	RAB29	78	40.373
ENSSPUG00000001533	-	82	42.775	ENSSPUG00000012950	-	80	42.775
ENSSPUG00000001533	-	74	40.127	ENSSPUG00000000617	RAB15	74	40.127
ENSSPUG00000001533	-	92	36.275	ENSSPUG00000008120	RAB33B	85	36.275
ENSSPUG00000001533	-	91	36.683	ENSSPUG00000012822	RAB1A	95	36.683
ENSSPUG00000001533	-	74	40.252	ENSSPUG00000000552	RAB39B	75	40.252
ENSSPUG00000001533	-	74	31.646	ENSSPUG00000008958	NRAS	83	31.646
ENSSPUG00000001533	-	71	35.294	ENSSPUG00000018361	RHEB	87	35.294
ENSSPUG00000001533	-	70	33.557	ENSSPUG00000017750	MRAS	84	31.461
ENSSPUG00000001533	-	86	37.017	ENSSPUG00000003439	RAB31	92	37.017
ENSSPUG00000001533	-	89	36.458	ENSSPUG00000010112	RAB2B	88	36.224
ENSSPUG00000001533	-	82	33.908	ENSSPUG00000016774	RRAS2	94	33.908
ENSSPUG00000001533	-	98	91.748	ENSSPUG00000017301	RAB6A	99	91.748
ENSSPUG00000001533	-	75	40.625	ENSSPUG00000014551	RAB36	70	40.625
ENSSPUG00000001533	-	84	41.808	ENSSPUG00000014873	RAB5B	82	41.808
ENSSPUG00000001533	-	74	30.864	ENSSPUG00000003341	-	84	30.864
ENSSPUG00000001533	-	73	40.385	ENSSPUG00000010337	RAB42	73	40.385
ENSSPUG00000001533	-	92	36.410	ENSSPUG00000007945	RAB1B	96	36.410
ENSSPUG00000001533	-	75	37.975	ENSSPUG00000018803	RAB14	69	37.975
ENSSPUG00000001533	-	74	35.032	ENSSPUG00000002243	-	72	35.032
ENSSPUG00000001533	-	86	36.735	ENSSPUG00000005574	RAB33A	86	36.735
ENSSPUG00000001533	-	76	35.802	ENSSPUG00000007384	RAP2B	88	35.802
ENSSPUG00000001533	-	82	36.364	ENSSPUG00000002555	RAB25	85	36.686
ENSSPUG00000001533	-	74	32.278	ENSSPUG00000005243	HRAS	83	32.278
ENSSPUG00000001533	-	76	31.361	ENSSPUG00000005315	RASL11A	69	31.361
ENSSPUG00000001533	-	82	43.353	ENSSPUG00000001173	RAB5A	89	43.353
ENSSPUG00000001533	-	73	34.194	ENSSPUG00000002526	-	71	34.194

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000001533	-	98	91.748	ENSG00000175582	RAB6A	98	95.000	Homo_sapiens
ENSSPUG00000001533	-	100	92.417	ENSAPOG00000005731	rab6a	100	92.417	Acanthochromis_polyacanthus
ENSSPUG00000001533	-	98	91.748	ENSAMEG00000017285	RAB6A	81	91.748	Ailuropoda_melanoleuca
ENSSPUG00000001533	-	98	92.718	ENSACIG00000014605	rab6a	99	92.718	Amphilophus_citrinellus
ENSSPUG00000001533	-	98	91.262	ENSAOCG00000012277	-	99	91.262	Amphiprion_ocellaris
ENSSPUG00000001533	-	98	92.233	ENSATEG00000012459	-	99	92.233	Anabas_testudineus
ENSSPUG00000001533	-	100	93.365	ENSATEG00000015992	rab41	100	93.365	Anabas_testudineus
ENSSPUG00000001533	-	100	90.698	ENSACAG00000015304	-	100	90.698	Anolis_carolinensis
ENSSPUG00000001533	-	98	91.748	ENSANAG00000036364	RAB6A	99	91.748	Aotus_nancymaae
ENSSPUG00000001533	-	100	92.417	ENSACLG00000019423	rab41	100	92.417	Astatotilapia_calliptera
ENSSPUG00000001533	-	98	92.233	ENSAMXG00000032547	rab6a	99	92.233	Astyanax_mexicanus
ENSSPUG00000001533	-	100	84.360	ENSAMXG00000033216	rab41	100	84.360	Astyanax_mexicanus
ENSSPUG00000001533	-	98	91.748	ENSBTAG00000000025	RAB6A	99	91.748	Bos_taurus
ENSSPUG00000001533	-	95	74.634	WBGene00004269	rab-6.1	98	74.634	Caenorhabditis_elegans
ENSSPUG00000001533	-	98	91.748	ENSCJAG00000039039	RAB6A	99	91.748	Callithrix_jacchus
ENSSPUG00000001533	-	98	91.262	ENSCAFG00000028870	RAB6A	99	91.262	Canis_familiaris
ENSSPUG00000001533	-	98	91.748	ENSCAFG00020002206	RAB6A	99	91.748	Canis_lupus_dingo
ENSSPUG00000001533	-	98	91.748	ENSCHIG00000023957	RAB6A	99	91.748	Capra_hircus
ENSSPUG00000001533	-	98	91.262	ENSTSYG00000013951	RAB6A	99	91.262	Carlito_syrichta
ENSSPUG00000001533	-	98	91.748	ENSCATG00000012428	RAB6A	99	91.748	Cercocebus_atys
ENSSPUG00000001533	-	98	92.233	ENSCLAG00000015536	RAB6A	99	92.233	Chinchilla_lanigera
ENSSPUG00000001533	-	98	91.748	ENSCSAG00000004062	RAB6A	99	91.748	Chlorocebus_sabaeus
ENSSPUG00000001533	-	98	81.068	ENSCHOG00000000992	RAB6A	99	81.068	Choloepus_hoffmanni
ENSSPUG00000001533	-	98	92.233	ENSCPBG00000000041	RAB6A	99	92.233	Chrysemys_picta_bellii
ENSSPUG00000001533	-	96	84.951	ENSCING00000002960	-	99	84.951	Ciona_intestinalis
ENSSPUG00000001533	-	96	84.951	ENSCSAVG00000009128	-	99	84.951	Ciona_savignyi
ENSSPUG00000001533	-	98	91.748	ENSCANG00000029094	RAB6A	99	91.748	Colobus_angolensis_palliatus
ENSSPUG00000001533	-	98	91.748	ENSCGRG00001018153	Rab6a	99	91.748	Cricetulus_griseus_chok1gshd
ENSSPUG00000001533	-	100	92.891	ENSCSEG00000004941	rab41	100	92.891	Cynoglossus_semilaevis
ENSSPUG00000001533	-	98	91.748	ENSCVAG00000022249	rab6a	99	91.748	Cyprinodon_variegatus
ENSSPUG00000001533	-	100	92.891	ENSCVAG00000001618	rab41	100	92.891	Cyprinodon_variegatus
ENSSPUG00000001533	-	98	92.233	ENSDARG00000103714	rab6a	99	92.233	Danio_rerio
ENSSPUG00000001533	-	100	92.891	ENSDARG00000029885	rab41	100	92.891	Danio_rerio
ENSSPUG00000001533	-	98	91.262	ENSDNOG00000042746	RAB6A	99	91.262	Dasypus_novemcinctus
ENSSPUG00000001533	-	98	92.233	ENSDORG00000027784	Rab6a	99	92.233	Dipodomys_ordii
ENSSPUG00000001533	-	98	85.990	FBgn0015797	Rab6	99	85.990	Drosophila_melanogaster
ENSSPUG00000001533	-	98	69.903	ENSETEG00000009412	-	99	69.903	Echinops_telfairi
ENSSPUG00000001533	-	98	91.748	ENSEASG00005017944	RAB6A	99	91.748	Equus_asinus_asinus
ENSSPUG00000001533	-	98	91.748	ENSECAG00000022694	-	99	91.748	Equus_caballus
ENSSPUG00000001533	-	98	91.748	ENSELUG00000008876	rab6a	99	91.748	Esox_lucius
ENSSPUG00000001533	-	98	91.748	ENSFCAG00000023834	RAB6A	99	91.748	Felis_catus
ENSSPUG00000001533	-	98	92.718	ENSFALG00000008011	RAB6A	99	92.718	Ficedula_albicollis
ENSSPUG00000001533	-	98	92.233	ENSFDAG00000010948	-	99	92.233	Fukomys_damarensis
ENSSPUG00000001533	-	100	91.943	ENSGMOG00000004095	rab41	100	91.943	Gadus_morhua
ENSSPUG00000001533	-	100	98.578	ENSGALG00000026278	-	100	98.578	Gallus_gallus
ENSSPUG00000001533	-	98	92.233	ENSGALG00000017320	RAB6A	99	92.233	Gallus_gallus
ENSSPUG00000001533	-	98	91.748	ENSGAFG00000006356	rab6a	99	91.748	Gambusia_affinis
ENSSPUG00000001533	-	100	92.417	ENSGAFG00000019872	rab41	100	92.417	Gambusia_affinis
ENSSPUG00000001533	-	100	92.417	ENSGACG00000017153	rab41	100	92.417	Gasterosteus_aculeatus
ENSSPUG00000001533	-	98	92.233	ENSGACG00000020356	rab6a	99	92.233	Gasterosteus_aculeatus
ENSSPUG00000001533	-	98	92.233	ENSGAGG00000021701	RAB6A	99	92.233	Gopherus_agassizii
ENSSPUG00000001533	-	98	91.748	ENSGGOG00000010610	RAB6A	99	91.748	Gorilla_gorilla
ENSSPUG00000001533	-	98	92.233	ENSHBUG00000000890	rab6a	99	92.233	Haplochromis_burtoni
ENSSPUG00000001533	-	98	92.233	ENSHGLG00000008829	-	99	92.233	Heterocephalus_glaber_female
ENSSPUG00000001533	-	98	91.262	ENSHGLG00100014550	-	99	91.262	Heterocephalus_glaber_male
ENSSPUG00000001533	-	100	92.891	ENSHCOG00000004404	rab41	100	92.891	Hippocampus_comes
ENSSPUG00000001533	-	98	89.806	ENSHCOG00000006550	-	99	89.806	Hippocampus_comes
ENSSPUG00000001533	-	100	93.839	ENSIPUG00000019382	rab41	100	93.839	Ictalurus_punctatus
ENSSPUG00000001533	-	98	90.777	ENSIPUG00000021740	rab6a	99	90.777	Ictalurus_punctatus
ENSSPUG00000001533	-	98	91.748	ENSSTOG00000023497	RAB6A	99	91.748	Ictidomys_tridecemlineatus
ENSSPUG00000001533	-	78	94.512	ENSKMAG00000013146	-	85	94.512	Kryptolebias_marmoratus
ENSSPUG00000001533	-	98	90.291	ENSLBEG00000003748	rab6a	99	90.291	Labrus_bergylta
ENSSPUG00000001533	-	98	88.835	ENSLACG00000005168	RAB6A	99	88.835	Latimeria_chalumnae
ENSSPUG00000001533	-	100	96.209	ENSLACG00000013980	rab41	100	96.209	Latimeria_chalumnae
ENSSPUG00000001533	-	100	94.313	ENSLOCG00000015191	rab41	99	94.313	Lepisosteus_oculatus
ENSSPUG00000001533	-	98	91.748	ENSMFAG00000041027	RAB6A	99	91.748	Macaca_fascicularis
ENSSPUG00000001533	-	98	91.748	ENSMNEG00000029216	RAB6A	99	91.748	Macaca_nemestrina
ENSSPUG00000001533	-	98	91.748	ENSMLEG00000038771	RAB6A	99	91.748	Mandrillus_leucophaeus
ENSSPUG00000001533	-	100	91.469	ENSMAMG00000020859	rab41	100	91.469	Mastacembelus_armatus
ENSSPUG00000001533	-	98	92.233	ENSMAMG00000012488	rab6a	99	92.233	Mastacembelus_armatus
ENSSPUG00000001533	-	98	92.233	ENSMZEG00005023181	rab6a	99	92.233	Maylandia_zebra
ENSSPUG00000001533	-	98	91.748	ENSMICG00000031565	RAB6A	99	91.748	Microcebus_murinus
ENSSPUG00000001533	-	98	91.748	ENSMOCG00000014387	Rab6a	99	91.748	Microtus_ochrogaster
ENSSPUG00000001533	-	95	91.045	ENSMMOG00000001992	rab41	91	91.045	Mola_mola
ENSSPUG00000001533	-	98	86.893	ENSMMOG00000016209	rab6a	99	86.893	Mola_mola
ENSSPUG00000001533	-	98	91.748	ENSMODG00000007600	RAB6A	99	91.748	Monodelphis_domestica
ENSSPUG00000001533	-	100	93.365	ENSMALG00000010549	rab41	100	93.365	Monopterus_albus
ENSSPUG00000001533	-	98	91.748	ENSMALG00000020364	-	99	91.748	Monopterus_albus
ENSSPUG00000001533	-	98	91.748	MGP_CAROLIEiJ_G0030051	Rab6a	99	91.748	Mus_caroli
ENSSPUG00000001533	-	98	91.748	ENSMUSG00000030704	Rab6a	99	91.748	Mus_musculus
ENSSPUG00000001533	-	98	91.748	MGP_PahariEiJ_G0013273	Rab6a	99	91.748	Mus_pahari
ENSSPUG00000001533	-	98	91.748	MGP_SPRETEiJ_G0031162	Rab6a	99	91.748	Mus_spretus
ENSSPUG00000001533	-	98	91.748	ENSMPUG00000009724	RAB6A	99	91.748	Mustela_putorius_furo
ENSSPUG00000001533	-	98	91.262	ENSNGAG00000014566	Rab6a	99	91.262	Nannospalax_galili
ENSSPUG00000001533	-	98	92.233	ENSNBRG00000016716	rab6a	99	92.233	Neolamprologus_brichardi
ENSSPUG00000001533	-	100	93.365	ENSNBRG00000022702	rab41	100	93.365	Neolamprologus_brichardi
ENSSPUG00000001533	-	98	91.748	ENSNLEG00000017098	RAB6A	99	91.748	Nomascus_leucogenys
ENSSPUG00000001533	-	98	91.748	ENSMEUG00000010026	RAB6A	99	91.748	Notamacropus_eugenii
ENSSPUG00000001533	-	89	92.513	ENSOPRG00000010355	RAB6A	99	92.513	Ochotona_princeps
ENSSPUG00000001533	-	98	92.233	ENSODEG00000005942	RAB6A	99	92.233	Octodon_degus
ENSSPUG00000001533	-	98	92.233	ENSONIG00000004394	rab6a	99	92.233	Oreochromis_niloticus
ENSSPUG00000001533	-	98	91.748	ENSOCUG00000009297	RAB6A	99	91.748	Oryctolagus_cuniculus
ENSSPUG00000001533	-	97	91.707	ENSORLG00000026197	rab6a	99	91.707	Oryzias_latipes
ENSSPUG00000001533	-	96	84.762	ENSORLG00000000937	-	98	84.762	Oryzias_latipes
ENSSPUG00000001533	-	100	92.417	ENSORLG00020000604	rab41	100	92.417	Oryzias_latipes_hni
ENSSPUG00000001533	-	97	91.707	ENSORLG00020001816	rab6a	99	91.707	Oryzias_latipes_hni
ENSSPUG00000001533	-	97	91.707	ENSORLG00015006162	rab6a	99	91.707	Oryzias_latipes_hsok
ENSSPUG00000001533	-	97	91.707	ENSOMEG00000004379	-	99	91.707	Oryzias_melastigma
ENSSPUG00000001533	-	98	90.777	ENSOGAG00000027043	RAB6A	99	90.777	Otolemur_garnettii
ENSSPUG00000001533	-	98	91.748	ENSOARG00000007994	RAB6A	99	91.748	Ovis_aries
ENSSPUG00000001533	-	98	91.748	ENSPPAG00000011436	RAB6A	99	91.748	Pan_paniscus
ENSSPUG00000001533	-	98	91.748	ENSPPRG00000009543	RAB6A	99	91.748	Panthera_pardus
ENSSPUG00000001533	-	98	91.748	ENSPTRG00000044137	RAB6A	99	91.748	Pan_troglodytes
ENSSPUG00000001533	-	98	91.748	ENSPANG00000014356	RAB6A	99	91.748	Papio_anubis
ENSSPUG00000001533	-	100	89.573	ENSPKIG00000018584	rab41	100	89.573	Paramormyrops_kingsleyae
ENSSPUG00000001533	-	98	90.291	ENSPMGG00000010067	-	99	90.291	Periophthalmus_magnuspinnatus
ENSSPUG00000001533	-	98	91.748	ENSPFOG00000019509	rab6a	99	91.748	Poecilia_formosa
ENSSPUG00000001533	-	98	91.748	ENSPLAG00000019570	rab6a	99	91.748	Poecilia_latipinna
ENSSPUG00000001533	-	100	93.365	ENSPLAG00000000376	rab41	100	93.365	Poecilia_latipinna
ENSSPUG00000001533	-	98	91.748	ENSPMEG00000003369	rab6a	99	91.748	Poecilia_mexicana
ENSSPUG00000001533	-	100	93.365	ENSPMEG00000014170	rab41	100	93.365	Poecilia_mexicana
ENSSPUG00000001533	-	98	91.748	ENSPREG00000021505	rab6a	99	91.748	Poecilia_reticulata
ENSSPUG00000001533	-	98	91.748	ENSPPYG00000003663	RAB6A	99	91.748	Pongo_abelii
ENSSPUG00000001533	-	88	92.432	ENSPCAG00000006752	RAB6A	99	92.432	Procavia_capensis
ENSSPUG00000001533	-	98	91.748	ENSPCOG00000021991	RAB6A	99	91.748	Propithecus_coquereli
ENSSPUG00000001533	-	98	91.748	ENSPVAG00000017342	RAB6A	99	91.748	Pteropus_vampyrus
ENSSPUG00000001533	-	100	93.365	ENSPNYG00000013288	rab41	100	93.365	Pundamilia_nyererei
ENSSPUG00000001533	-	98	92.233	ENSPNYG00000020556	rab6a	99	92.233	Pundamilia_nyererei
ENSSPUG00000001533	-	100	94.313	ENSPNAG00000021737	rab41	100	94.313	Pygocentrus_nattereri
ENSSPUG00000001533	-	98	91.748	ENSRNOG00000018176	Rab6a	99	91.748	Rattus_norvegicus
ENSSPUG00000001533	-	98	91.748	ENSRBIG00000030390	RAB6A	99	91.748	Rhinopithecus_bieti
ENSSPUG00000001533	-	98	91.748	ENSRROG00000042103	RAB6A	99	91.748	Rhinopithecus_roxellana
ENSSPUG00000001533	-	98	77.670	ENSSBOG00000028389	RAB6A	99	77.670	Saimiri_boliviensis_boliviensis
ENSSPUG00000001533	-	98	91.748	ENSSFOG00015002077	rab6a	99	91.748	Scleropages_formosus
ENSSPUG00000001533	-	96	93.596	ENSSFOG00015004941	rab41	98	92.381	Scleropages_formosus
ENSSPUG00000001533	-	100	93.365	ENSSMAG00000015774	rab41	100	93.365	Scophthalmus_maximus
ENSSPUG00000001533	-	98	87.379	ENSSMAG00000017205	-	99	87.379	Scophthalmus_maximus
ENSSPUG00000001533	-	98	92.718	ENSSDUG00000013496	-	99	92.718	Seriola_dumerili
ENSSPUG00000001533	-	100	92.417	ENSSLDG00000022282	rab41	100	92.417	Seriola_lalandi_dorsalis
ENSSPUG00000001533	-	98	92.718	ENSSLDG00000015289	-	99	92.718	Seriola_lalandi_dorsalis
ENSSPUG00000001533	-	98	90.777	ENSSPAG00000001067	-	99	90.777	Stegastes_partitus
ENSSPUG00000001533	-	100	92.417	ENSSPAG00000006001	rab41	100	92.417	Stegastes_partitus
ENSSPUG00000001533	-	98	91.748	ENSSSCG00000014828	RAB6A	99	91.748	Sus_scrofa
ENSSPUG00000001533	-	98	92.718	ENSTGUG00000013470	RAB6A	99	92.718	Taeniopygia_guttata
ENSSPUG00000001533	-	100	93.365	ENSTRUG00000009223	rab41	100	93.365	Takifugu_rubripes
ENSSPUG00000001533	-	98	91.262	ENSTRUG00000023252	rab6a	99	91.262	Takifugu_rubripes
ENSSPUG00000001533	-	98	91.262	ENSTTRG00000005374	RAB6A	99	91.262	Tursiops_truncatus
ENSSPUG00000001533	-	98	86.893	ENSUMAG00000010248	RAB6A	99	86.893	Ursus_maritimus
ENSSPUG00000001533	-	98	91.748	ENSVVUG00000024550	RAB6A	99	91.748	Vulpes_vulpes
ENSSPUG00000001533	-	89	91.444	ENSXETG00000023200	rab6a	99	91.444	Xenopus_tropicalis
ENSSPUG00000001533	-	98	79.126	ENSXETG00000031363	-	99	79.126	Xenopus_tropicalis
ENSSPUG00000001533	-	98	91.748	ENSXCOG00000006259	rab6a	99	91.748	Xiphophorus_couchianus
ENSSPUG00000001533	-	98	91.748	ENSXMAG00000011903	rab6a	99	91.748	Xiphophorus_maculatus