EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000001707 (Gene tree)
Gene ID: -
Gene Symbol: PUM3
Alias: HA-8|KIAA0020|PEN|PUF6|XTP5|hPUF-A
Full Name: pumilio RNA binding family member 3
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 62690 bases
Position: chrQEPC01009294.1:1724433-1787122
Accession: 29676
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000002202	CPL	PF08144.11	2e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000002331	PUM3-201	2194	-	ENSSPUP00000002202	632 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000001707's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000001707's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000001707	PUM3	100	69.599	ENSG00000080608	PUM3	97	70.175	Homo_sapiens
ENSSPUG00000001707	PUM3	99	54.217	ENSAPOG00000020252	pum3	98	55.243	Acanthochromis_polyacanthus
ENSSPUG00000001707	PUM3	97	71.565	ENSAMEG00000012187	PUM3	97	71.565	Ailuropoda_melanoleuca
ENSSPUG00000001707	PUM3	86	56.443	ENSACIG00000009786	pum3	92	56.443	Amphilophus_citrinellus
ENSSPUG00000001707	PUM3	99	54.977	ENSAOCG00000004439	pum3	98	55.399	Amphiprion_ocellaris
ENSSPUG00000001707	PUM3	99	54.977	ENSAPEG00000020523	pum3	98	55.399	Amphiprion_percula
ENSSPUG00000001707	PUM3	84	61.726	ENSATEG00000005799	pum3	95	57.282	Anabas_testudineus
ENSSPUG00000001707	PUM3	96	74.032	ENSAPLG00000002920	PUM3	99	74.032	Anas_platyrhynchos
ENSSPUG00000001707	PUM3	93	74.068	ENSACAG00000003174	PUM3	96	74.561	Anolis_carolinensis
ENSSPUG00000001707	PUM3	100	69.385	ENSANAG00000024520	PUM3	97	70.111	Aotus_nancymaae
ENSSPUG00000001707	PUM3	99	54.869	ENSACLG00000001017	pum3	98	54.984	Astatotilapia_calliptera
ENSSPUG00000001707	PUM3	99	64.219	ENSAMXG00000020911	pum3	99	64.000	Astyanax_mexicanus
ENSSPUG00000001707	PUM3	97	71.246	ENSBTAG00000013357	PUM3	97	71.246	Bos_taurus
ENSSPUG00000001707	PUM3	80	31.008	WBGene00014165	puf-12	66	31.008	Caenorhabditis_elegans
ENSSPUG00000001707	PUM3	100	69.706	ENSCJAG00000010917	PUM3	97	70.447	Callithrix_jacchus
ENSSPUG00000001707	PUM3	97	70.813	ENSCAFG00000002035	PUM3	97	70.813	Canis_familiaris
ENSSPUG00000001707	PUM3	97	70.973	ENSCAFG00020026867	PUM3	97	70.973	Canis_lupus_dingo
ENSSPUG00000001707	PUM3	97	71.086	ENSCHIG00000021559	PUM3	97	71.086	Capra_hircus
ENSSPUG00000001707	PUM3	100	70.170	ENSTSYG00000007481	PUM3	97	70.767	Carlito_syrichta
ENSSPUG00000001707	PUM3	100	66.667	ENSCAPG00000010592	-	97	67.943	Cavia_aperea
ENSSPUG00000001707	PUM3	100	68.315	ENSCPOG00000008552	-	97	69.649	Cavia_porcellus
ENSSPUG00000001707	PUM3	100	70.015	ENSCCAG00000032650	PUM3	97	70.767	Cebus_capucinus
ENSSPUG00000001707	PUM3	100	70.479	ENSCATG00000024880	PUM3	97	71.246	Cercocebus_atys
ENSSPUG00000001707	PUM3	100	70.015	ENSCLAG00000011892	PUM3	99	70.015	Chinchilla_lanigera
ENSSPUG00000001707	PUM3	100	70.788	ENSCSAG00000008691	PUM3	97	71.565	Chlorocebus_sabaeus
ENSSPUG00000001707	PUM3	97	55.520	ENSCHOG00000002535	PUM3	92	55.520	Choloepus_hoffmanni
ENSSPUG00000001707	PUM3	99	78.515	ENSCPBG00000025470	PUM3	92	79.085	Chrysemys_picta_bellii
ENSSPUG00000001707	PUM3	87	38.819	ENSCING00000024199	-	99	38.819	Ciona_intestinalis
ENSSPUG00000001707	PUM3	88	39.336	ENSCSAVG00000006072	-	99	39.504	Ciona_savignyi
ENSSPUG00000001707	PUM3	100	70.679	ENSCANG00000006142	PUM3	100	70.679	Colobus_angolensis_palliatus
ENSSPUG00000001707	PUM3	100	69.706	ENSCGRG00001016402	Pum3	99	69.706	Cricetulus_griseus_chok1gshd
ENSSPUG00000001707	PUM3	100	69.706	ENSCGRG00000010207	Pum3	99	69.706	Cricetulus_griseus_crigri
ENSSPUG00000001707	PUM3	88	55.786	ENSCSEG00000001565	pum3	93	58.955	Cynoglossus_semilaevis
ENSSPUG00000001707	PUM3	51	51.103	ENSCVAG00000006550	pum3	92	51.103	Cyprinodon_variegatus
ENSSPUG00000001707	PUM3	98	64.960	ENSDARG00000087779	pum3	98	65.260	Danio_rerio
ENSSPUG00000001707	PUM3	100	62.308	ENSDNOG00000008157	PUM3	68	62.580	Dasypus_novemcinctus
ENSSPUG00000001707	PUM3	83	70.913	ENSETEG00000015331	PUM3	84	71.009	Echinops_telfairi
ENSSPUG00000001707	PUM3	80	40.430	ENSEBUG00000011586	pum3	76	40.430	Eptatretus_burgeri
ENSSPUG00000001707	PUM3	97	70.973	ENSEASG00005010350	PUM3	97	70.973	Equus_asinus_asinus
ENSSPUG00000001707	PUM3	97	71.292	ENSECAG00000017193	PUM3	97	71.292	Equus_caballus
ENSSPUG00000001707	PUM3	90	64.433	ENSEEUG00000010314	PUM3	97	64.433	Erinaceus_europaeus
ENSSPUG00000001707	PUM3	99	62.025	ENSELUG00000002215	pum3	93	64.322	Esox_lucius
ENSSPUG00000001707	PUM3	99	76.489	ENSFALG00000010509	PUM3	97	77.670	Ficedula_albicollis
ENSSPUG00000001707	PUM3	100	69.599	ENSFDAG00000021027	PUM3	97	70.175	Fukomys_damarensis
ENSSPUG00000001707	PUM3	98	59.737	ENSFHEG00000015576	pum3	97	59.737	Fundulus_heteroclitus
ENSSPUG00000001707	PUM3	84	60.000	ENSGMOG00000014217	pum3	99	60.000	Gadus_morhua
ENSSPUG00000001707	PUM3	99	73.824	ENSGALG00000010178	PUM3	96	75.367	Gallus_gallus
ENSSPUG00000001707	PUM3	59	60.106	ENSGAFG00000001930	pum3	64	60.106	Gambusia_affinis
ENSSPUG00000001707	PUM3	84	60.264	ENSGACG00000017878	pum3	97	60.264	Gasterosteus_aculeatus
ENSSPUG00000001707	PUM3	99	78.831	ENSGAGG00000018983	PUM3	99	78.699	Gopherus_agassizii
ENSSPUG00000001707	PUM3	100	70.170	ENSGGOG00000006143	PUM3	97	70.767	Gorilla_gorilla
ENSSPUG00000001707	PUM3	99	49.686	ENSHBUG00000012903	pum3	93	51.783	Haplochromis_burtoni
ENSSPUG00000001707	PUM3	100	69.969	ENSHGLG00000015868	-	96	70.833	Heterocephalus_glaber_female
ENSSPUG00000001707	PUM3	100	69.969	ENSHGLG00100018825	PUM3	97	70.833	Heterocephalus_glaber_male
ENSSPUG00000001707	PUM3	84	60.038	ENSHCOG00000010306	pum3	98	54.559	Hippocampus_comes
ENSSPUG00000001707	PUM3	88	65.780	ENSIPUG00000024801	pum3	99	61.321	Ictalurus_punctatus
ENSSPUG00000001707	PUM3	100	70.615	ENSSTOG00000009586	PUM3	97	71.224	Ictidomys_tridecemlineatus
ENSSPUG00000001707	PUM3	99	69.088	ENSJJAG00000012563	Pum3	96	69.649	Jaculus_jaculus
ENSSPUG00000001707	PUM3	99	55.760	ENSKMAG00000010277	pum3	98	56.529	Kryptolebias_marmoratus
ENSSPUG00000001707	PUM3	99	54.490	ENSLBEG00000012213	pum3	94	56.169	Labrus_bergylta
ENSSPUG00000001707	PUM3	100	68.487	ENSLACG00000008312	PUM3	96	69.593	Latimeria_chalumnae
ENSSPUG00000001707	PUM3	99	68.760	ENSLOCG00000012529	pum3	95	71.237	Lepisosteus_oculatus
ENSSPUG00000001707	PUM3	97	70.159	ENSLAFG00000017341	PUM3	99	70.233	Loxodonta_africana
ENSSPUG00000001707	PUM3	100	70.634	ENSMFAG00000001430	PUM3	97	71.406	Macaca_fascicularis
ENSSPUG00000001707	PUM3	100	70.634	ENSMMUG00000002362	PUM3	95	71.406	Macaca_mulatta
ENSSPUG00000001707	PUM3	100	70.634	ENSMNEG00000035288	PUM3	97	71.406	Macaca_nemestrina
ENSSPUG00000001707	PUM3	100	70.479	ENSMLEG00000034820	PUM3	97	71.246	Mandrillus_leucophaeus
ENSSPUG00000001707	PUM3	90	58.711	ENSMAMG00000022861	pum3	90	57.993	Mastacembelus_armatus
ENSSPUG00000001707	PUM3	99	54.884	ENSMZEG00005014205	pum3	95	55.000	Maylandia_zebra
ENSSPUG00000001707	PUM3	99	64.670	ENSMGAG00000002255	PUM3	99	66.489	Meleagris_gallopavo
ENSSPUG00000001707	PUM3	100	69.861	ENSMAUG00000009733	Pum3	99	69.861	Mesocricetus_auratus
ENSSPUG00000001707	PUM3	100	69.243	ENSMICG00000045916	PUM3	84	69.968	Microcebus_murinus
ENSSPUG00000001707	PUM3	100	69.552	ENSMOCG00000019519	-	99	69.552	Microtus_ochrogaster
ENSSPUG00000001707	PUM3	100	66.563	ENSMOCG00000014830	-	96	68.249	Microtus_ochrogaster
ENSSPUG00000001707	PUM3	99	51.567	ENSMMOG00000012184	pum3	98	53.519	Mola_mola
ENSSPUG00000001707	PUM3	99	60.779	ENSMODG00000015417	PUM3	95	68.677	Monodelphis_domestica
ENSSPUG00000001707	PUM3	99	52.695	ENSMALG00000022164	pum3	87	57.167	Monopterus_albus
ENSSPUG00000001707	PUM3	100	67.901	MGP_CAROLIEiJ_G0022845	Pum3	99	69.136	Mus_caroli
ENSSPUG00000001707	PUM3	100	68.624	ENSMUSG00000041360	Pum3	99	68.624	Mus_musculus
ENSSPUG00000001707	PUM3	100	68.056	MGP_PahariEiJ_G0014338	Pum3	99	69.243	Mus_pahari
ENSSPUG00000001707	PUM3	100	68.624	MGP_SPRETEiJ_G0023763	Pum3	99	68.624	Mus_spretus
ENSSPUG00000001707	PUM3	97	69.537	ENSMPUG00000005125	PUM3	97	69.537	Mustela_putorius_furo
ENSSPUG00000001707	PUM3	100	69.861	ENSMLUG00000002309	PUM3	100	69.861	Myotis_lucifugus
ENSSPUG00000001707	PUM3	100	64.660	ENSNGAG00000019468	Pum3	97	67.145	Nannospalax_galili
ENSSPUG00000001707	PUM3	91	53.667	ENSNBRG00000021370	pum3	94	53.667	Neolamprologus_brichardi
ENSSPUG00000001707	PUM3	100	70.479	ENSNLEG00000008712	PUM3	97	71.086	Nomascus_leucogenys
ENSSPUG00000001707	PUM3	77	52.675	ENSMEUG00000013606	-	99	53.094	Notamacropus_eugenii
ENSSPUG00000001707	PUM3	69	61.247	ENSOPRG00000004225	-	69	61.247	Ochotona_princeps
ENSSPUG00000001707	PUM3	100	65.138	ENSODEG00000016477	-	97	65.877	Octodon_degus
ENSSPUG00000001707	PUM3	100	69.892	ENSODEG00000003625	-	97	70.794	Octodon_degus
ENSSPUG00000001707	PUM3	99	55.140	ENSONIG00000012733	pum3	96	54.911	Oreochromis_niloticus
ENSSPUG00000001707	PUM3	83	73.864	ENSOANG00000014995	PUM3	99	73.857	Ornithorhynchus_anatinus
ENSSPUG00000001707	PUM3	99	68.944	ENSOCUG00000026104	-	97	69.649	Oryctolagus_cuniculus
ENSSPUG00000001707	PUM3	100	69.243	ENSOCUG00000004189	-	97	69.968	Oryctolagus_cuniculus
ENSSPUG00000001707	PUM3	99	51.908	ENSORLG00000014935	pum3	99	52.812	Oryzias_latipes
ENSSPUG00000001707	PUM3	99	52.160	ENSORLG00020002841	pum3	94	53.821	Oryzias_latipes_hni
ENSSPUG00000001707	PUM3	99	53.323	ENSORLG00015015906	pum3	99	52.656	Oryzias_latipes_hsok
ENSSPUG00000001707	PUM3	94	53.300	ENSOMEG00000009427	pum3	98	52.283	Oryzias_melastigma
ENSSPUG00000001707	PUM3	99	53.918	ENSOGAG00000033481	-	98	53.846	Otolemur_garnettii
ENSSPUG00000001707	PUM3	100	69.599	ENSOGAG00000008125	-	97	70.016	Otolemur_garnettii
ENSSPUG00000001707	PUM3	97	70.860	ENSOARG00000013337	PUM3	97	70.860	Ovis_aries
ENSSPUG00000001707	PUM3	100	70.062	ENSPPAG00000041337	PUM3	97	70.654	Pan_paniscus
ENSSPUG00000001707	PUM3	100	68.779	ENSPPRG00000000809	PUM3	97	69.600	Panthera_pardus
ENSSPUG00000001707	PUM3	100	69.088	ENSPTIG00000021934	PUM3	97	69.920	Panthera_tigris_altaica
ENSSPUG00000001707	PUM3	100	70.062	ENSPTRG00000020735	PUM3	97	70.654	Pan_troglodytes
ENSSPUG00000001707	PUM3	100	70.634	ENSPANG00000025118	PUM3	97	71.406	Papio_anubis
ENSSPUG00000001707	PUM3	99	64.230	ENSPKIG00000022249	pum3	98	64.120	Paramormyrops_kingsleyae
ENSSPUG00000001707	PUM3	99	77.567	ENSPSIG00000016272	PUM3	97	78.105	Pelodiscus_sinensis
ENSSPUG00000001707	PUM3	78	60.041	ENSPMGG00000021261	pum3	99	60.041	Periophthalmus_magnuspinnatus
ENSSPUG00000001707	PUM3	90	67.257	ENSPEMG00000019340	-	100	67.257	Peromyscus_maniculatus_bairdii
ENSSPUG00000001707	PUM3	99	68.500	ENSPCIG00000030598	PUM3	92	68.500	Phascolarctos_cinereus
ENSSPUG00000001707	PUM3	95	56.271	ENSPFOG00000001719	pum3	99	56.271	Poecilia_formosa
ENSSPUG00000001707	PUM3	95	54.160	ENSPLAG00000020010	pum3	99	54.474	Poecilia_latipinna
ENSSPUG00000001707	PUM3	99	54.460	ENSPMEG00000017451	pum3	99	54.976	Poecilia_mexicana
ENSSPUG00000001707	PUM3	53	45.370	ENSPREG00000019478	-	68	65.789	Poecilia_reticulata
ENSSPUG00000001707	PUM3	100	70.479	ENSPPYG00000019255	PUM3	97	71.246	Pongo_abelii
ENSSPUG00000001707	PUM3	100	62.539	ENSPCAG00000005797	PUM3	93	62.441	Procavia_capensis
ENSSPUG00000001707	PUM3	100	69.861	ENSPCOG00000027325	PUM3	97	70.607	Propithecus_coquereli
ENSSPUG00000001707	PUM3	100	68.673	ENSPVAG00000016135	PUM3	92	69.378	Pteropus_vampyrus
ENSSPUG00000001707	PUM3	99	54.726	ENSPNYG00000016124	pum3	98	55.156	Pundamilia_nyererei
ENSSPUG00000001707	PUM3	93	63.518	ENSPNAG00000026524	pum3	97	63.518	Pygocentrus_nattereri
ENSSPUG00000001707	PUM3	100	68.470	ENSRNOG00000012574	Pum3	100	68.470	Rattus_norvegicus
ENSSPUG00000001707	PUM3	100	68.161	ENSRNOG00000048356	RGD1308750	100	68.161	Rattus_norvegicus
ENSSPUG00000001707	PUM3	100	70.833	ENSRBIG00000036924	PUM3	100	70.679	Rhinopithecus_bieti
ENSSPUG00000001707	PUM3	100	70.833	ENSRROG00000041089	PUM3	100	70.833	Rhinopithecus_roxellana
ENSSPUG00000001707	PUM3	100	70.479	ENSSBOG00000028066	PUM3	97	71.086	Saimiri_boliviensis_boliviensis
ENSSPUG00000001707	PUM3	99	69.244	ENSSHAG00000003730	PUM3	97	68.690	Sarcophilus_harrisii
ENSSPUG00000001707	PUM3	99	64.937	ENSSFOG00015018778	pum3	96	65.490	Scleropages_formosus
ENSSPUG00000001707	PUM3	84	61.132	ENSSMAG00000013236	pum3	93	56.452	Scophthalmus_maximus
ENSSPUG00000001707	PUM3	99	53.914	ENSSDUG00000001887	pum3	87	58.824	Seriola_dumerili
ENSSPUG00000001707	PUM3	99	54.932	ENSSLDG00000015766	pum3	94	56.039	Seriola_lalandi_dorsalis
ENSSPUG00000001707	PUM3	95	67.642	ENSSARG00000000579	PUM3	99	67.642	Sorex_araneus
ENSSPUG00000001707	PUM3	99	54.954	ENSSPAG00000003976	pum3	98	55.854	Stegastes_partitus
ENSSPUG00000001707	PUM3	97	71.086	ENSSSCG00000005227	PUM3	97	71.086	Sus_scrofa
ENSSPUG00000001707	PUM3	99	76.619	ENSTGUG00000005339	PUM3	96	77.414	Taeniopygia_guttata
ENSSPUG00000001707	PUM3	99	54.925	ENSTRUG00000004074	pum3	92	57.029	Takifugu_rubripes
ENSSPUG00000001707	PUM3	91	59.240	ENSTNIG00000010325	pum3	97	57.800	Tetraodon_nigroviridis
ENSSPUG00000001707	PUM3	83	57.116	ENSTBEG00000013058	PUM3	86	57.271	Tupaia_belangeri
ENSSPUG00000001707	PUM3	97	64.217	ENSTTRG00000001062	PUM3	93	64.217	Tursiops_truncatus
ENSSPUG00000001707	PUM3	97	63.259	ENSUMAG00000018443	PUM3	100	69.868	Ursus_maritimus
ENSSPUG00000001707	PUM3	100	70.170	ENSVPAG00000010766	PUM3	96	70.880	Vicugna_pacos
ENSSPUG00000001707	PUM3	97	70.973	ENSVVUG00000006527	PUM3	97	70.973	Vulpes_vulpes
ENSSPUG00000001707	PUM3	99	58.320	ENSXETG00000011707	pum3	96	59.612	Xenopus_tropicalis
ENSSPUG00000001707	PUM3	94	55.444	ENSXCOG00000006725	pum3	99	55.444	Xiphophorus_couchianus
ENSSPUG00000001707	PUM3	96	54.631	ENSXMAG00000002926	pum3	99	54.631	Xiphophorus_maculatus