EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000001866 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 30472 bases
Position: chrQEPC01010380.1:1788104-1818575
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000002401	RRM_1	PF00076.22	5.7e-15	1	1
ENSSPUP00000002408	RRM_1	PF00076.22	3.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000002551	-	9881	-	ENSSPUP00000002408	3079 (aa)	-	-
ENSSPUT00000002544	-	9995	-	ENSSPUP00000002401	3117 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000001866's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000001866's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000001866	-	100	66.435	ENSG00000065526	SPEN	86	66.508	Homo_sapiens
ENSSPUG00000001866	-	90	84.211	ENSAPOG00000011411	si:ch1073-335m2.2	82	84.211	Acanthochromis_polyacanthus
ENSSPUG00000001866	-	100	43.832	ENSAPOG00000009853	-	87	44.045	Acanthochromis_polyacanthus
ENSSPUG00000001866	-	100	67.588	ENSAMEG00000011817	SPEN	86	67.475	Ailuropoda_melanoleuca
ENSSPUG00000001866	-	89	78.519	ENSAOCG00000008077	si:ch1073-335m2.2	67	78.519	Amphiprion_ocellaris
ENSSPUG00000001866	-	100	43.808	ENSAOCG00000014505	-	87	43.990	Amphiprion_ocellaris
ENSSPUG00000001866	-	86	84.211	ENSAPEG00000013515	si:ch1073-335m2.2	58	84.211	Amphiprion_percula
ENSSPUG00000001866	-	100	43.812	ENSAPEG00000010288	-	87	44.020	Amphiprion_percula
ENSSPUG00000001866	-	86	81.564	ENSATEG00000007674	si:ch1073-335m2.2	72	86.111	Anabas_testudineus
ENSSPUG00000001866	-	100	44.358	ENSATEG00000005627	-	87	44.421	Anabas_testudineus
ENSSPUG00000001866	-	100	83.219	ENSAPLG00000012618	SPEN	89	97.222	Anas_platyrhynchos
ENSSPUG00000001866	-	100	96.296	ENSACAG00000013761	SPEN	88	96.296	Anolis_carolinensis
ENSSPUG00000001866	-	100	66.290	ENSANAG00000034428	SPEN	86	66.320	Aotus_nancymaae
ENSSPUG00000001866	-	100	43.718	ENSACLG00000016922	-	89	43.888	Astatotilapia_calliptera
ENSSPUG00000001866	-	61	46.376	ENSAMXG00000012485	spen	87	91.667	Astyanax_mexicanus
ENSSPUG00000001866	-	100	66.556	ENSBTAG00000018729	SPEN	86	96.296	Bos_taurus
ENSSPUG00000001866	-	100	66.131	ENSCJAG00000008527	SPEN	86	66.161	Callithrix_jacchus
ENSSPUG00000001866	-	85	72.989	ENSCAFG00000016132	-	81	72.989	Canis_familiaris
ENSSPUG00000001866	-	100	66.777	ENSCHIG00000025070	SPEN	86	66.740	Capra_hircus
ENSSPUG00000001866	-	100	67.885	ENSTSYG00000036016	SPEN	93	67.885	Carlito_syrichta
ENSSPUG00000001866	-	100	62.623	ENSCAPG00000013803	SPEN	89	62.950	Cavia_aperea
ENSSPUG00000001866	-	100	61.313	ENSCPOG00000014036	SPEN	89	61.494	Cavia_porcellus
ENSSPUG00000001866	-	100	65.269	ENSCCAG00000020258	SPEN	96	66.261	Cebus_capucinus
ENSSPUG00000001866	-	100	66.045	ENSCATG00000015079	SPEN	90	66.205	Cercocebus_atys
ENSSPUG00000001866	-	100	62.266	ENSCLAG00000002018	SPEN	89	62.820	Chinchilla_lanigera
ENSSPUG00000001866	-	100	66.262	ENSCSAG00000000841	SPEN	86	66.580	Chlorocebus_sabaeus
ENSSPUG00000001866	-	100	85.678	ENSCPBG00000010477	SPEN	89	85.489	Chrysemys_picta_bellii
ENSSPUG00000001866	-	100	66.491	ENSCANG00000034547	SPEN	86	66.637	Colobus_angolensis_palliatus
ENSSPUG00000001866	-	99	96.296	ENSCGRG00001007725	Spen	86	96.296	Cricetulus_griseus_chok1gshd
ENSSPUG00000001866	-	99	65.147	ENSCGRG00000010581	Spen	87	96.296	Cricetulus_griseus_crigri
ENSSPUG00000001866	-	100	46.602	ENSCSEG00000003915	-	85	46.095	Cynoglossus_semilaevis
ENSSPUG00000001866	-	100	42.591	ENSCVAG00000016346	-	87	42.625	Cyprinodon_variegatus
ENSSPUG00000001866	-	91	62.642	ENSCVAG00000009075	si:ch1073-335m2.2	81	62.642	Cyprinodon_variegatus
ENSSPUG00000001866	-	52	81.609	ENSDARG00000074332	si:ch1073-335m2.2	50	84.259	Danio_rerio
ENSSPUG00000001866	-	100	91.667	ENSDARG00000074245	spen	87	91.667	Danio_rerio
ENSSPUG00000001866	-	100	67.920	ENSDNOG00000041948	SPEN	86	67.920	Dasypus_novemcinctus
ENSSPUG00000001866	-	99	66.519	ENSDORG00000023909	Spen	89	61.581	Dipodomys_ordii
ENSSPUG00000001866	-	66	72.980	ENSETEG00000016692	-	60	95.833	Echinops_telfairi
ENSSPUG00000001866	-	53	61.333	ENSEBUG00000007307	-	52	48.105	Eptatretus_burgeri
ENSSPUG00000001866	-	100	67.231	ENSEASG00005015911	SPEN	90	67.274	Equus_asinus_asinus
ENSSPUG00000001866	-	100	67.318	ENSECAG00000008833	SPEN	90	67.361	Equus_caballus
ENSSPUG00000001866	-	65	96.970	ENSEEUG00000010255	SPEN	60	96.970	Erinaceus_europaeus
ENSSPUG00000001866	-	88	78.061	ENSELUG00000007726	si:ch1073-335m2.2	81	78.061	Esox_lucius
ENSSPUG00000001866	-	100	82.062	ENSFALG00000003551	SPEN	100	82.093	Ficedula_albicollis
ENSSPUG00000001866	-	100	62.239	ENSFDAG00000010212	SPEN	86	62.148	Fukomys_damarensis
ENSSPUG00000001866	-	92	42.199	ENSGMOG00000008397	-	82	41.633	Gadus_morhua
ENSSPUG00000001866	-	89	81.006	ENSGMOG00000008156	si:ch1073-335m2.2	81	81.006	Gadus_morhua
ENSSPUG00000001866	-	100	82.472	ENSGALG00000036932	SPEN	88	82.440	Gallus_gallus
ENSSPUG00000001866	-	65	84.615	ENSGAFG00000021570	si:ch1073-335m2.2	61	84.615	Gambusia_affinis
ENSSPUG00000001866	-	100	43.362	ENSGAFG00000015819	-	87	43.566	Gambusia_affinis
ENSSPUG00000001866	-	100	43.085	ENSGACG00000005341	-	88	43.193	Gasterosteus_aculeatus
ENSSPUG00000001866	-	66	80.000	ENSGACG00000001176	si:ch1073-335m2.2	58	86.111	Gasterosteus_aculeatus
ENSSPUG00000001866	-	100	87.792	ENSGAGG00000020785	SPEN	90	97.222	Gopherus_agassizii
ENSSPUG00000001866	-	100	66.088	ENSGGOG00000012041	SPEN	86	66.162	Gorilla_gorilla
ENSSPUG00000001866	-	100	92.593	ENSHBUG00000020626	-	87	92.593	Haplochromis_burtoni
ENSSPUG00000001866	-	67	83.626	ENSHBUG00000023253	si:ch1073-335m2.2	62	83.626	Haplochromis_burtoni
ENSSPUG00000001866	-	100	65.427	ENSHGLG00000019259	SPEN	85	95.370	Heterocephalus_glaber_female
ENSSPUG00000001866	-	87	67.984	ENSHGLG00100019294	SPEN	80	95.370	Heterocephalus_glaber_male
ENSSPUG00000001866	-	89	63.874	ENSHCOG00000006004	si:ch1073-335m2.2	85	63.874	Hippocampus_comes
ENSSPUG00000001866	-	100	42.269	ENSIPUG00000021668	spen	87	42.598	Ictalurus_punctatus
ENSSPUG00000001866	-	96	78.736	ENSIPUG00000018212	si:ch1073-335m2.2	91	84.375	Ictalurus_punctatus
ENSSPUG00000001866	-	100	67.251	ENSSTOG00000021428	SPEN	88	96.296	Ictidomys_tridecemlineatus
ENSSPUG00000001866	-	72	63.444	ENSJJAG00000010882	Spen	62	63.574	Jaculus_jaculus
ENSSPUG00000001866	-	100	42.785	ENSKMAG00000003882	-	80	46.489	Kryptolebias_marmoratus
ENSSPUG00000001866	-	93	84.211	ENSKMAG00000021725	si:ch1073-335m2.2	82	84.211	Kryptolebias_marmoratus
ENSSPUG00000001866	-	99	41.362	ENSLBEG00000019129	-	100	41.352	Labrus_bergylta
ENSSPUG00000001866	-	96	96.914	ENSLACG00000003258	SPEN	89	96.296	Latimeria_chalumnae
ENSSPUG00000001866	-	100	92.593	ENSLOCG00000007896	si:ch1073-335m2.2	89	92.593	Lepisosteus_oculatus
ENSSPUG00000001866	-	100	96.296	ENSLAFG00000004524	SPEN	86	96.296	Loxodonta_africana
ENSSPUG00000001866	-	100	66.175	ENSMFAG00000041974	SPEN	86	66.493	Macaca_fascicularis
ENSSPUG00000001866	-	100	66.262	ENSMMUG00000008026	SPEN	86	66.580	Macaca_mulatta
ENSSPUG00000001866	-	100	66.406	ENSMNEG00000042402	SPEN	86	66.465	Macaca_nemestrina
ENSSPUG00000001866	-	100	66.305	ENSMLEG00000039293	SPEN	86	66.623	Mandrillus_leucophaeus
ENSSPUG00000001866	-	65	84.431	ENSMAMG00000023870	si:ch1073-335m2.2	61	84.431	Mastacembelus_armatus
ENSSPUG00000001866	-	100	43.701	ENSMZEG00005021491	-	97	43.871	Maylandia_zebra
ENSSPUG00000001866	-	99	65.170	ENSMAUG00000008318	Spen	86	96.296	Mesocricetus_auratus
ENSSPUG00000001866	-	100	67.845	ENSMICG00000030994	SPEN	86	67.624	Microcebus_murinus
ENSSPUG00000001866	-	100	96.296	ENSMOCG00000016083	Spen	86	96.296	Microtus_ochrogaster
ENSSPUG00000001866	-	100	93.519	ENSMODG00000003411	SPEN	89	93.519	Monodelphis_domestica
ENSSPUG00000001866	-	100	43.376	ENSMALG00000008625	-	87	43.539	Monopterus_albus
ENSSPUG00000001866	-	99	95.370	MGP_CAROLIEiJ_G0026745	Spen	86	95.370	Mus_caroli
ENSSPUG00000001866	-	100	95.370	ENSMUSG00000040761	Spen	86	95.370	Mus_musculus
ENSSPUG00000001866	-	100	95.370	MGP_PahariEiJ_G0029076	Spen	86	95.370	Mus_pahari
ENSSPUG00000001866	-	100	95.370	MGP_SPRETEiJ_G0027724	Spen	86	95.370	Mus_spretus
ENSSPUG00000001866	-	100	66.594	ENSMPUG00000016317	SPEN	87	66.485	Mustela_putorius_furo
ENSSPUG00000001866	-	92	94.624	ENSMLUG00000010144	SPEN	82	94.624	Myotis_lucifugus
ENSSPUG00000001866	-	96	66.840	ENSNGAG00000000641	Spen	88	96.296	Nannospalax_galili
ENSSPUG00000001866	-	67	83.626	ENSNBRG00000005733	si:ch1073-335m2.2	60	83.626	Neolamprologus_brichardi
ENSSPUG00000001866	-	99	41.862	ENSNBRG00000022090	-	100	42.647	Neolamprologus_brichardi
ENSSPUG00000001866	-	100	66.145	ENSNLEG00000007652	SPEN	86	66.362	Nomascus_leucogenys
ENSSPUG00000001866	-	90	92.708	ENSMEUG00000002422	SPEN	80	92.708	Notamacropus_eugenii
ENSSPUG00000001866	-	91	69.916	ENSOPRG00000015800	SPEN	80	69.916	Ochotona_princeps
ENSSPUG00000001866	-	100	62.039	ENSODEG00000016644	SPEN	88	62.163	Octodon_degus
ENSSPUG00000001866	-	100	44.259	ENSONIG00000006573	-	88	44.139	Oreochromis_niloticus
ENSSPUG00000001866	-	100	66.704	ENSOCUG00000010840	SPEN	86	66.704	Oryctolagus_cuniculus
ENSSPUG00000001866	-	100	40.405	ENSORLG00000028894	-	100	40.315	Oryzias_latipes
ENSSPUG00000001866	-	100	40.533	ENSORLG00020007735	-	100	40.472	Oryzias_latipes_hni
ENSSPUG00000001866	-	83	80.226	ENSORLG00020009351	si:ch1073-335m2.2	63	86.111	Oryzias_latipes_hni
ENSSPUG00000001866	-	73	79.661	ENSORLG00015005537	si:ch1073-335m2.2	62	86.111	Oryzias_latipes_hsok
ENSSPUG00000001866	-	93	47.646	ENSORLG00015022085	-	81	47.321	Oryzias_latipes_hsok
ENSSPUG00000001866	-	66	64.314	ENSOMEG00000004509	si:ch1073-335m2.2	64	86.111	Oryzias_melastigma
ENSSPUG00000001866	-	100	42.973	ENSOMEG00000007639	-	80	46.954	Oryzias_melastigma
ENSSPUG00000001866	-	99	66.521	ENSOGAG00000025110	SPEN	86	96.296	Otolemur_garnettii
ENSSPUG00000001866	-	100	65.711	ENSOARG00000008477	SPEN	87	96.296	Ovis_aries
ENSSPUG00000001866	-	100	66.305	ENSPPAG00000035690	SPEN	87	66.378	Pan_paniscus
ENSSPUG00000001866	-	100	66.435	ENSPTRG00000000210	SPEN	86	66.522	Pan_troglodytes
ENSSPUG00000001866	-	100	65.938	ENSPANG00000006293	SPEN	86	66.099	Papio_anubis
ENSSPUG00000001866	-	100	46.603	ENSPKIG00000002617	SPEN	87	92.593	Paramormyrops_kingsleyae
ENSSPUG00000001866	-	100	49.701	ENSPKIG00000010492	si:ch1073-335m2.2	90	91.667	Paramormyrops_kingsleyae
ENSSPUG00000001866	-	100	85.185	ENSPSIG00000008026	SPEN	89	85.185	Pelodiscus_sinensis
ENSSPUG00000001866	-	100	96.296	ENSPEMG00000022997	Spen	87	96.296	Peromyscus_maniculatus_bairdii
ENSSPUG00000001866	-	60	85.799	ENSPFOG00000017986	si:ch1073-335m2.2	77	85.799	Poecilia_formosa
ENSSPUG00000001866	-	83	85.799	ENSPLAG00000016625	si:ch1073-335m2.2	77	85.799	Poecilia_latipinna
ENSSPUG00000001866	-	100	43.105	ENSPMEG00000006764	-	87	43.058	Poecilia_mexicana
ENSSPUG00000001866	-	60	85.799	ENSPMEG00000002674	si:ch1073-335m2.2	58	85.799	Poecilia_mexicana
ENSSPUG00000001866	-	100	43.212	ENSPREG00000010399	-	87	43.256	Poecilia_reticulata
ENSSPUG00000001866	-	65	85.799	ENSPREG00000005357	si:ch1073-335m2.2	60	85.799	Poecilia_reticulata
ENSSPUG00000001866	-	100	66.435	ENSPPYG00000001834	SPEN	86	66.508	Pongo_abelii
ENSSPUG00000001866	-	91	77.224	ENSPCAG00000009543	SPEN	81	95.370	Procavia_capensis
ENSSPUG00000001866	-	100	67.108	ENSPCOG00000021735	SPEN	86	66.887	Propithecus_coquereli
ENSSPUG00000001866	-	81	74.775	ENSPVAG00000013794	SPEN	70	74.650	Pteropus_vampyrus
ENSSPUG00000001866	-	67	83.626	ENSPNYG00000009042	si:ch1073-335m2.2	60	83.626	Pundamilia_nyererei
ENSSPUG00000001866	-	100	43.629	ENSPNYG00000012379	-	87	43.858	Pundamilia_nyererei
ENSSPUG00000001866	-	100	46.051	ENSPNAG00000020795	spen	54	47.830	Pygocentrus_nattereri
ENSSPUG00000001866	-	96	81.609	ENSPNAG00000011452	si:ch1073-335m2.2	81	81.609	Pygocentrus_nattereri
ENSSPUG00000001866	-	100	95.370	ENSRNOG00000033556	Spen	88	95.370	Rattus_norvegicus
ENSSPUG00000001866	-	100	66.851	ENSRBIG00000039654	SPEN	87	66.851	Rhinopithecus_bieti
ENSSPUG00000001866	-	100	66.363	ENSRROG00000035686	SPEN	88	66.508	Rhinopithecus_roxellana
ENSSPUG00000001866	-	100	65.784	ENSSBOG00000028770	SPEN	86	65.945	Saimiri_boliviensis_boliviensis
ENSSPUG00000001866	-	100	93.519	ENSSHAG00000004960	SPEN	89	93.519	Sarcophilus_harrisii
ENSSPUG00000001866	-	63	48.310	ENSSFOG00015010267	si:ch1073-335m2.2	87	92.593	Scleropages_formosus
ENSSPUG00000001866	-	60	52.031	ENSSFOG00015007131	si:ch1073-335m2.2	99	93.519	Scleropages_formosus
ENSSPUG00000001866	-	68	74.882	ENSSMAG00000000125	si:ch1073-335m2.2	82	74.882	Scophthalmus_maximus
ENSSPUG00000001866	-	100	43.894	ENSSMAG00000008996	-	87	43.709	Scophthalmus_maximus
ENSSPUG00000001866	-	100	45.125	ENSSDUG00000003476	-	89	45.261	Seriola_dumerili
ENSSPUG00000001866	-	97	84.211	ENSSDUG00000008416	si:ch1073-335m2.2	88	86.111	Seriola_dumerili
ENSSPUG00000001866	-	100	44.856	ENSSLDG00000012950	-	87	44.943	Seriola_lalandi_dorsalis
ENSSPUG00000001866	-	100	43.902	ENSSPAG00000006014	-	87	43.945	Stegastes_partitus
ENSSPUG00000001866	-	66	84.795	ENSSPAG00000012454	si:ch1073-335m2.2	61	86.111	Stegastes_partitus
ENSSPUG00000001866	-	72	66.073	ENSSSCG00000034484	SPEN	85	96.296	Sus_scrofa
ENSSPUG00000001866	-	100	42.767	ENSTRUG00000024350	-	87	42.793	Takifugu_rubripes
ENSSPUG00000001866	-	95	80.791	ENSTNIG00000014666	si:ch1073-335m2.2	80	80.791	Tetraodon_nigroviridis
ENSSPUG00000001866	-	95	71.182	ENSTNIG00000010907	-	87	71.182	Tetraodon_nigroviridis
ENSSPUG00000001866	-	73	88.177	ENSTBEG00000003628	SPEN	63	96.296	Tupaia_belangeri
ENSSPUG00000001866	-	80	87.442	ENSTTRG00000015704	SPEN	69	87.442	Tursiops_truncatus
ENSSPUG00000001866	-	100	66.958	ENSUAMG00000009600	SPEN	86	66.848	Ursus_americanus
ENSSPUG00000001866	-	100	65.306	ENSUMAG00000021641	SPEN	86	66.083	Ursus_maritimus
ENSSPUG00000001866	-	100	67.491	ENSVVUG00000028951	SPEN	92	66.594	Vulpes_vulpes
ENSSPUG00000001866	-	99	83.810	ENSXETG00000023114	SPEN	88	83.810	Xenopus_tropicalis
ENSSPUG00000001866	-	85	78.919	ENSXCOG00000004516	si:ch1073-335m2.2	68	78.919	Xiphophorus_couchianus
ENSSPUG00000001866	-	89	84.615	ENSXMAG00000029887	si:ch1073-335m2.2	61	84.615	Xiphophorus_maculatus
ENSSPUG00000001866	-	100	43.076	ENSXMAG00000021384	-	87	43.223	Xiphophorus_maculatus