EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000001872 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 37830 bases
Position: chrQEPC01012683.1:84752-122581
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000002412	MMR_HSR1	PF01926.23	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000002556	-	5493	-	ENSSPUP00000002412	1787 (aa)	-	-
ENSSPUT00000002548	-	5003	-	ENSSPUP00000002405	1476 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000001872's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000001872's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000001872	-	86	59.084	ENSSPUG00000001864	-	99	59.084

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000001872	-	88	58.561	ENSACAG00000028691	-	82	58.416	Anolis_carolinensis
ENSSPUG00000001872	-	98	44.460	ENSACLG00000022932	-	73	44.460	Astatotilapia_calliptera
ENSSPUG00000001872	-	89	44.122	ENSAMXG00000031410	-	71	44.122	Astyanax_mexicanus
ENSSPUG00000001872	-	89	44.398	ENSAMXG00000033978	-	71	44.613	Astyanax_mexicanus
ENSSPUG00000001872	-	97	62.448	ENSCPBG00000009862	-	97	62.448	Chrysemys_picta_bellii
ENSSPUG00000001872	-	89	44.429	ENSELUG00000007062	-	71	44.429	Esox_lucius
ENSSPUG00000001872	-	89	43.255	ENSELUG00000005671	-	72	43.255	Esox_lucius
ENSSPUG00000001872	-	88	65.248	ENSGAGG00000006690	-	82	65.248	Gopherus_agassizii
ENSSPUG00000001872	-	89	43.423	ENSKMAG00000016912	-	72	43.423	Kryptolebias_marmoratus
ENSSPUG00000001872	-	88	43.978	ENSKMAG00000011534	-	73	43.978	Kryptolebias_marmoratus
ENSSPUG00000001872	-	88	45.251	ENSPNAG00000004915	-	71	45.251	Pygocentrus_nattereri
ENSSPUG00000001872	-	89	44.759	ENSSMAG00000004655	-	71	44.759	Scophthalmus_maximus
ENSSPUG00000001872	-	88	42.877	ENSSDUG00000017025	-	72	42.877	Seriola_dumerili
ENSSPUG00000001872	-	88	43.688	ENSSLDG00000002567	-	80	43.688	Seriola_lalandi_dorsalis
ENSSPUG00000001872	-	88	42.532	ENSXMAG00000024425	-	72	42.532	Xiphophorus_maculatus