EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSPUG00000002052 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Sphenodon_punctatus
Status
putative
Strand
Minus strand
Length
27082 bases
Position
chrQEPC01012458.1:1192797-1219878
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSPUP00000002647RRM_1PF00076.229.9e-3412
ENSSPUP00000002647RRM_1PF00076.229.9e-3422
ENSSPUP00000002647RRM_3PF08777.114.5e-0811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSPUT00000002803-1364-ENSSPUP00000002647260 (aa)--
Gene Model
Click here to download ENSSPUG00000002052's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000002052's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSPUG00000002052-6142.073ENSSPUG00000015680SRSF96643.976
ENSSPUG00000002052-7542.000ENSSPUG00000000804-8741.622
ENSSPUG00000002052-6764.045ENSSPUG00000004967SRSF65068.657
ENSSPUG00000002052-6868.449ENSSPUG00000002464SRSF59068.421
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSPUG00000002052-6873.370ENSAPOG00000017395srsf5a6275.543Acanthochromis_polyacanthus
ENSSPUG00000002052-6872.193ENSACIG00000011892srsf5a9670.896Amphilophus_citrinellus
ENSSPUG00000002052-6873.224ENSAOCG00000014967srsf5a6275.956Amphiprion_ocellaris
ENSSPUG00000002052-6873.224ENSAPEG00000009297srsf5a6275.956Amphiprion_percula
ENSSPUG00000002052-6875.000ENSATEG00000000198srsf5a6576.064Anabas_testudineus
ENSSPUG00000002052-8981.116ENSAPLG00000002469-9577.510Anas_platyrhynchos
ENSSPUG00000002052-6891.011ENSACAG00000029015-9574.206Anolis_carolinensis
ENSSPUG00000002052-6871.354ENSACLG00000027166srsf5a6572.396Astatotilapia_calliptera
ENSSPUG00000002052-6874.054ENSAMXG00000030476srsf5a9463.602Astyanax_mexicanus
ENSSPUG00000002052-8981.545ENSCPBG00000021518-9581.048Chrysemys_picta_bellii
ENSSPUG00000002052-6856.633ENSCSAVG00000011376-7857.143Ciona_savignyi
ENSSPUG00000002052-6871.649ENSCSEG00000008109srsf5a6272.680Cynoglossus_semilaevis
ENSSPUG00000002052-6767.553ENSCVAG00000016982srsf5a9666.917Cyprinodon_variegatus
ENSSPUG00000002052-9561.417ENSDARG00000029818srsf5a9576.378Danio_rerio
ENSSPUG00000002052-6872.021ENSELUG00000020439srsf5a6274.093Esox_lucius
ENSSPUG00000002052-6884.270ENSFALG00000005098-9571.805Ficedula_albicollis
ENSSPUG00000002052-6869.101ENSFHEG00000003955srsf5a9762.759Fundulus_heteroclitus
ENSSPUG00000002052-6875.978ENSGMOG00000000869srsf5a9475.843Gadus_morhua
ENSSPUG00000002052-6883.708ENSGALG00000033259SRSF5A9571.642Gallus_gallus
ENSSPUG00000002052-6867.978ENSGAFG00000018237srsf5a5468.539Gambusia_affinis
ENSSPUG00000002052-6875.843ENSGACG00000011761srsf5a7075.843Gasterosteus_aculeatus
ENSSPUG00000002052-8981.116ENSGAGG00000007312-9580.645Gopherus_agassizii
ENSSPUG00000002052-6871.728ENSHBUG00000014048srsf5a6472.775Haplochromis_burtoni
ENSSPUG00000002052-6873.262ENSHCOG00000017557srsf5a6273.118Hippocampus_comes
ENSSPUG00000002052-9960.854ENSIPUG00000003439srsf5a9562.264Ictalurus_punctatus
ENSSPUG00000002052-6868.617ENSKMAG00000014937srsf5a5868.085Kryptolebias_marmoratus
ENSSPUG00000002052-6869.744ENSLBEG00000017153srsf5a7470.769Labrus_bergylta
ENSSPUG00000002052-6878.453ENSLACG00000017874-7081.215Latimeria_chalumnae
ENSSPUG00000002052-6876.757ENSLOCG00000014075srsf5a6177.297Lepisosteus_oculatus
ENSSPUG00000002052-6875.691ENSMAMG00000000192srsf5a6576.796Mastacembelus_armatus
ENSSPUG00000002052-6871.728ENSMZEG00005010485srsf5a6472.775Maylandia_zebra
ENSSPUG00000002052-7381.675ENSMGAG00000011888-9685.000Meleagris_gallopavo
ENSSPUG00000002052-6875.556ENSMMOG00000009793srsf5a6177.348Mola_mola
ENSSPUG00000002052-6876.966ENSMALG00000021194srsf5a6374.719Monopterus_albus
ENSSPUG00000002052-6872.105ENSNBRG00000000771srsf5a6473.158Neolamprologus_brichardi
ENSSPUG00000002052-6872.105ENSONIG00000019583srsf5a6473.158Oreochromis_niloticus
ENSSPUG00000002052-7074.595ENSORLG00000009268srsf5a6775.275Oryzias_latipes
ENSSPUG00000002052-7074.595ENSORLG00020003281srsf56775.275Oryzias_latipes_hni
ENSSPUG00000002052-7074.595ENSORLG00015023075srsf56775.275Oryzias_latipes_hsok
ENSSPUG00000002052-6875.138ENSOMEG00000000628srsf5a6675.000Oryzias_melastigma
ENSSPUG00000002052-6874.731ENSPKIG00000002054srsf5a6875.269Paramormyrops_kingsleyae
ENSSPUG00000002052-10083.525ENSPSIG00000008238-9581.048Pelodiscus_sinensis
ENSSPUG00000002052-6971.351ENSPMGG00000020125srsf5a5571.585Periophthalmus_magnuspinnatus
ENSSPUG00000002052-6867.016ENSPFOG00000022993srsf5a6068.586Poecilia_formosa
ENSSPUG00000002052-6866.842ENSPLAG00000005508srsf5a5968.421Poecilia_latipinna
ENSSPUG00000002052-6867.016ENSPMEG00000016339srsf5a6068.586Poecilia_mexicana
ENSSPUG00000002052-6866.667ENSPREG00000018091srsf5a6168.229Poecilia_reticulata
ENSSPUG00000002052-6871.728ENSPNYG00000021245srsf5a6472.775Pundamilia_nyererei
ENSSPUG00000002052-6873.913ENSPNAG00000021333srsf5a6674.457Pygocentrus_nattereri
ENSSPUG00000002052-6874.731ENSSFOG00015008377srsf56674.731Scleropages_formosus
ENSSPUG00000002052-6869.652ENSSMAG00000010899srsf5a6669.652Scophthalmus_maximus
ENSSPUG00000002052-6874.176ENSSDUG00000006103srsf5a6377.049Seriola_dumerili
ENSSPUG00000002052-6874.176ENSSLDG00000004146srsf5a6377.049Seriola_lalandi_dorsalis
ENSSPUG00000002052-6873.770ENSSPAG00000002821srsf5a6375.956Stegastes_partitus
ENSSPUG00000002052-6884.270ENSTGUG00000011492-6883.708Taeniopygia_guttata
ENSSPUG00000002052-6870.312ENSTRUG00000022908srsf5a6571.354Takifugu_rubripes
ENSSPUG00000002052-10064.815ENSXETG00000017937srsf5a9672.374Xenopus_tropicalis
ENSSPUG00000002052-6869.519ENSXCOG00000015338srsf5a6171.123Xiphophorus_couchianus
ENSSPUG00000002052-6866.321ENSXMAG00000012823srsf5a6167.876Xiphophorus_maculatus

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