EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000002064 (Gene tree)
Gene ID: -
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 56886 bases
Position: chrQEPC01001847.1:774086-830971
Accession: 16792
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000002747	EST1	PF10374.9	1.5e-25	1	1
ENSSPUP00000002747	EST1_DNA_bind	PF10373.9	1.5e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000002910	SMG7-201	3423	-	ENSSPUP00000002747	1140 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000002064's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000002064's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000002064	SMG7	99	90.194	ENSG00000116698	SMG7	99	90.371	Homo_sapiens
ENSSPUG00000002064	SMG7	89	74.513	ENSAPOG00000009611	smg7	96	74.513	Acanthochromis_polyacanthus
ENSSPUG00000002064	SMG7	99	89.046	ENSAMEG00000002357	SMG7	99	89.134	Ailuropoda_melanoleuca
ENSSPUG00000002064	SMG7	97	64.171	ENSACIG00000015152	smg7	100	64.947	Amphilophus_citrinellus
ENSSPUG00000002064	SMG7	99	66.012	ENSAOCG00000013538	smg7	99	66.468	Amphiprion_ocellaris
ENSSPUG00000002064	SMG7	99	65.956	ENSAPEG00000007851	smg7	99	66.412	Amphiprion_percula
ENSSPUG00000002064	SMG7	99	65.085	ENSATEG00000006931	smg7	99	65.654	Anabas_testudineus
ENSSPUG00000002064	SMG7	99	92.145	ENSAPLG00000015811	SMG7	99	92.145	Anas_platyrhynchos
ENSSPUG00000002064	SMG7	99	86.097	ENSACAG00000014989	SMG7	99	86.600	Anolis_carolinensis
ENSSPUG00000002064	SMG7	99	90.371	ENSANAG00000028114	SMG7	99	90.548	Aotus_nancymaae
ENSSPUG00000002064	SMG7	99	64.461	ENSACLG00000022079	smg7	99	65.523	Astatotilapia_calliptera
ENSSPUG00000002064	SMG7	99	68.439	ENSAMXG00000020809	smg7	99	68.641	Astyanax_mexicanus
ENSSPUG00000002064	SMG7	99	88.428	ENSBTAG00000008003	SMG7	99	88.604	Bos_taurus
ENSSPUG00000002064	SMG7	99	90.371	ENSCJAG00000005135	SMG7	99	90.371	Callithrix_jacchus
ENSSPUG00000002064	SMG7	99	82.353	ENSCAFG00000013276	SMG7	97	82.437	Canis_familiaris
ENSSPUG00000002064	SMG7	99	89.488	ENSCAFG00020015475	SMG7	99	89.576	Canis_lupus_dingo
ENSSPUG00000002064	SMG7	99	81.810	ENSCHIG00000018192	SMG7	99	81.895	Capra_hircus
ENSSPUG00000002064	SMG7	99	90.018	ENSTSYG00000002667	SMG7	99	90.018	Carlito_syrichta
ENSSPUG00000002064	SMG7	99	81.933	ENSCPOG00000008906	SMG7	99	81.303	Cavia_porcellus
ENSSPUG00000002064	SMG7	99	90.459	ENSCCAG00000028596	SMG7	99	90.636	Cebus_capucinus
ENSSPUG00000002064	SMG7	99	90.283	ENSCATG00000011063	SMG7	99	90.459	Cercocebus_atys
ENSSPUG00000002064	SMG7	99	88.958	ENSCLAG00000010751	SMG7	99	88.958	Chinchilla_lanigera
ENSSPUG00000002064	SMG7	99	82.773	ENSCSAG00000012654	SMG7	97	82.941	Chlorocebus_sabaeus
ENSSPUG00000002064	SMG7	92	78.851	ENSCHOG00000010522	SMG7	93	79.216	Choloepus_hoffmanni
ENSSPUG00000002064	SMG7	99	93.404	ENSCPBG00000015724	SMG7	99	93.404	Chrysemys_picta_bellii
ENSSPUG00000002064	SMG7	99	90.194	ENSCANG00000015680	SMG7	100	89.746	Colobus_angolensis_palliatus
ENSSPUG00000002064	SMG7	99	88.604	ENSCGRG00001013705	Smg7	99	88.604	Cricetulus_griseus_chok1gshd
ENSSPUG00000002064	SMG7	99	88.594	ENSCGRG00000018401	Smg7	100	88.594	Cricetulus_griseus_crigri
ENSSPUG00000002064	SMG7	98	64.045	ENSCVAG00000011842	smg7	100	63.388	Cyprinodon_variegatus
ENSSPUG00000002064	SMG7	99	66.868	ENSDARG00000060767	smg7	99	67.500	Danio_rerio
ENSSPUG00000002064	SMG7	99	81.641	ENSDORG00000007331	Smg7	99	81.810	Dipodomys_ordii
ENSSPUG00000002064	SMG7	96	82.358	ENSETEG00000002654	SMG7	99	82.358	Echinops_telfairi
ENSSPUG00000002064	SMG7	99	82.910	ENSEASG00005006524	SMG7	99	83.080	Equus_asinus_asinus
ENSSPUG00000002064	SMG7	96	95.536	ENSECAG00000004313	SMG7	97	95.266	Equus_caballus
ENSSPUG00000002064	SMG7	95	82.187	ENSEEUG00000002024	SMG7	92	82.363	Erinaceus_europaeus
ENSSPUG00000002064	SMG7	99	63.607	ENSELUG00000010293	smg7	99	66.197	Esox_lucius
ENSSPUG00000002064	SMG7	99	85.702	ENSFCAG00000010900	SMG7	99	85.939	Felis_catus
ENSSPUG00000002064	SMG7	98	84.014	ENSFALG00000003047	SMG7	100	84.014	Ficedula_albicollis
ENSSPUG00000002064	SMG7	99	82.303	ENSFDAG00000012121	SMG7	99	82.253	Fukomys_damarensis
ENSSPUG00000002064	SMG7	99	64.696	ENSFHEG00000011073	smg7	99	64.177	Fundulus_heteroclitus
ENSSPUG00000002064	SMG7	72	73.585	ENSGMOG00000004916	smg7	76	74.237	Gadus_morhua
ENSSPUG00000002064	SMG7	99	91.140	ENSGALG00000004667	SMG7	99	91.140	Gallus_gallus
ENSSPUG00000002064	SMG7	99	64.120	ENSGAFG00000019000	smg7	99	64.286	Gambusia_affinis
ENSSPUG00000002064	SMG7	97	62.224	ENSGACG00000001634	smg7	99	62.917	Gasterosteus_aculeatus
ENSSPUG00000002064	SMG7	99	90.106	ENSGGOG00000002342	SMG7	99	90.283	Gorilla_gorilla
ENSSPUG00000002064	SMG7	99	63.339	ENSHBUG00000003726	smg7	99	63.889	Haplochromis_burtoni
ENSSPUG00000002064	SMG7	99	89.223	ENSHGLG00000009353	SMG7	99	89.399	Heterocephalus_glaber_female
ENSSPUG00000002064	SMG7	99	89.223	ENSHGLG00100009637	-	99	89.399	Heterocephalus_glaber_male
ENSSPUG00000002064	SMG7	99	75.888	ENSHGLG00100004878	-	99	76.058	Heterocephalus_glaber_male
ENSSPUG00000002064	SMG7	99	67.776	ENSIPUG00000016997	smg7	99	68.039	Ictalurus_punctatus
ENSSPUG00000002064	SMG7	99	87.191	ENSSTOG00000000401	SMG7	99	87.279	Ictidomys_tridecemlineatus
ENSSPUG00000002064	SMG7	99	81.472	ENSJJAG00000012351	Smg7	99	81.472	Jaculus_jaculus
ENSSPUG00000002064	SMG7	97	61.322	ENSKMAG00000004900	smg7	100	61.674	Kryptolebias_marmoratus
ENSSPUG00000002064	SMG7	99	65.606	ENSLBEG00000002983	smg7	99	66.178	Labrus_bergylta
ENSSPUG00000002064	SMG7	52	61.857	ENSLBEG00000005220	-	75	61.857	Labrus_bergylta
ENSSPUG00000002064	SMG7	99	74.957	ENSLACG00000000972	SMG7	99	75.326	Latimeria_chalumnae
ENSSPUG00000002064	SMG7	99	67.753	ENSLOCG00000002010	smg7	99	68.170	Lepisosteus_oculatus
ENSSPUG00000002064	SMG7	99	83.164	ENSLAFG00000008186	SMG7	99	83.263	Loxodonta_africana
ENSSPUG00000002064	SMG7	99	86.491	ENSMFAG00000031653	SMG7	100	86.162	Macaca_fascicularis
ENSSPUG00000002064	SMG7	99	89.716	ENSMMUG00000018458	SMG7	99	89.894	Macaca_mulatta
ENSSPUG00000002064	SMG7	99	90.283	ENSMNEG00000034798	SMG7	99	90.459	Macaca_nemestrina
ENSSPUG00000002064	SMG7	99	90.283	ENSMLEG00000037170	SMG7	99	90.459	Mandrillus_leucophaeus
ENSSPUG00000002064	SMG7	87	64.217	ENSMAMG00000018733	smg7	84	63.785	Mastacembelus_armatus
ENSSPUG00000002064	SMG7	99	64.741	ENSMZEG00005015247	smg7	99	64.996	Maylandia_zebra
ENSSPUG00000002064	SMG7	97	91.637	ENSMGAG00000001561	SMG7	98	91.637	Meleagris_gallopavo
ENSSPUG00000002064	SMG7	99	88.163	ENSMAUG00000019484	Smg7	99	88.339	Mesocricetus_auratus
ENSSPUG00000002064	SMG7	99	90.283	ENSMICG00000007145	SMG7	99	89.841	Microcebus_murinus
ENSSPUG00000002064	SMG7	99	87.986	ENSMOCG00000020748	Smg7	99	88.163	Microtus_ochrogaster
ENSSPUG00000002064	SMG7	99	64.138	ENSMMOG00000001524	smg7	99	63.901	Mola_mola
ENSSPUG00000002064	SMG7	92	89.856	ENSMODG00000007139	SMG7	99	89.856	Monodelphis_domestica
ENSSPUG00000002064	SMG7	99	65.240	ENSMALG00000000061	smg7	93	65.277	Monopterus_albus
ENSSPUG00000002064	SMG7	99	88.163	MGP_CAROLIEiJ_G0014704	Smg7	99	88.339	Mus_caroli
ENSSPUG00000002064	SMG7	99	88.074	ENSMUSG00000042772	Smg7	99	88.251	Mus_musculus
ENSSPUG00000002064	SMG7	99	88.163	MGP_PahariEiJ_G0027940	Smg7	99	88.339	Mus_pahari
ENSSPUG00000002064	SMG7	99	88.163	MGP_SPRETEiJ_G0015511	Smg7	99	88.339	Mus_spretus
ENSSPUG00000002064	SMG7	98	82.253	ENSMPUG00000011732	SMG7	97	82.338	Mustela_putorius_furo
ENSSPUG00000002064	SMG7	99	82.234	ENSMLUG00000015417	SMG7	99	82.403	Myotis_lucifugus
ENSSPUG00000002064	SMG7	99	88.693	ENSNGAG00000009836	Smg7	99	88.251	Nannospalax_galili
ENSSPUG00000002064	SMG7	98	61.164	ENSNBRG00000024343	smg7	99	61.706	Neolamprologus_brichardi
ENSSPUG00000002064	SMG7	99	90.371	ENSNLEG00000018018	SMG7	99	90.548	Nomascus_leucogenys
ENSSPUG00000002064	SMG7	69	86.179	ENSMEUG00000004681	SMG7	73	86.179	Notamacropus_eugenii
ENSSPUG00000002064	SMG7	96	72.838	ENSOPRG00000013942	SMG7	96	72.664	Ochotona_princeps
ENSSPUG00000002064	SMG7	99	89.223	ENSODEG00000010390	SMG7	99	89.223	Octodon_degus
ENSSPUG00000002064	SMG7	99	64.243	ENSONIG00000000277	smg7	99	65.299	Oreochromis_niloticus
ENSSPUG00000002064	SMG7	98	81.957	ENSOANG00000000994	SMG7	100	82.383	Ornithorhynchus_anatinus
ENSSPUG00000002064	SMG7	99	76.703	ENSOCUG00000005887	SMG7	93	76.871	Oryctolagus_cuniculus
ENSSPUG00000002064	SMG7	99	61.724	ENSORLG00000007314	smg7	71	91.558	Oryzias_latipes
ENSSPUG00000002064	SMG7	99	62.069	ENSORLG00020015779	smg7	99	63.621	Oryzias_latipes_hni
ENSSPUG00000002064	SMG7	99	62.457	ENSORLG00015012289	smg7	99	63.144	Oryzias_latipes_hsok
ENSSPUG00000002064	SMG7	99	61.551	ENSOMEG00000002328	smg7	99	62.479	Oryzias_melastigma
ENSSPUG00000002064	SMG7	96	81.659	ENSOGAG00000003107	SMG7	93	81.834	Otolemur_garnettii
ENSSPUG00000002064	SMG7	98	85.218	ENSOARG00000001352	SMG7	100	85.307	Ovis_aries
ENSSPUG00000002064	SMG7	99	90.371	ENSPPAG00000031619	SMG7	99	90.548	Pan_paniscus
ENSSPUG00000002064	SMG7	99	89.576	ENSPPRG00000011222	SMG7	99	89.488	Panthera_pardus
ENSSPUG00000002064	SMG7	96	85.379	ENSPTIG00000007242	SMG7	100	85.292	Panthera_tigris_altaica
ENSSPUG00000002064	SMG7	99	90.371	ENSPTRG00000001764	SMG7	99	90.548	Pan_troglodytes
ENSSPUG00000002064	SMG7	99	90.283	ENSPANG00000004520	SMG7	99	90.459	Papio_anubis
ENSSPUG00000002064	SMG7	99	66.169	ENSPKIG00000007242	smg7	99	66.637	Paramormyrops_kingsleyae
ENSSPUG00000002064	SMG7	98	92.602	ENSPSIG00000012201	SMG7	100	92.602	Pelodiscus_sinensis
ENSSPUG00000002064	SMG7	99	85.601	ENSPEMG00000011315	Smg7	99	85.777	Peromyscus_maniculatus_bairdii
ENSSPUG00000002064	SMG7	99	90.194	ENSPCIG00000003786	SMG7	99	90.194	Phascolarctos_cinereus
ENSSPUG00000002064	SMG7	99	61.500	ENSPFOG00000019219	smg7	99	62.026	Poecilia_formosa
ENSSPUG00000002064	SMG7	99	64.316	ENSPLAG00000001446	smg7	99	64.777	Poecilia_latipinna
ENSSPUG00000002064	SMG7	96	63.588	ENSPMEG00000005218	smg7	99	64.064	Poecilia_mexicana
ENSSPUG00000002064	SMG7	87	61.538	ENSPREG00000019039	smg7	91	62.500	Poecilia_reticulata
ENSSPUG00000002064	SMG7	99	90.371	ENSPPYG00000000427	SMG7	99	90.548	Pongo_abelii
ENSSPUG00000002064	SMG7	89	82.974	ENSPCAG00000008360	SMG7	88	82.974	Procavia_capensis
ENSSPUG00000002064	SMG7	99	86.926	ENSPCOG00000011996	SMG7	99	86.484	Propithecus_coquereli
ENSSPUG00000002064	SMG7	91	76.860	ENSPVAG00000000851	SMG7	89	77.778	Pteropus_vampyrus
ENSSPUG00000002064	SMG7	99	64.656	ENSPNYG00000007643	smg7	99	65.277	Pundamilia_nyererei
ENSSPUG00000002064	SMG7	99	68.166	ENSPNAG00000011374	smg7	99	68.426	Pygocentrus_nattereri
ENSSPUG00000002064	SMG7	99	88.261	ENSRNOG00000027962	Smg7	99	88.261	Rattus_norvegicus
ENSSPUG00000002064	SMG7	99	90.194	ENSRBIG00000036316	SMG7	99	90.371	Rhinopithecus_bieti
ENSSPUG00000002064	SMG7	99	90.194	ENSRROG00000035719	SMG7	99	90.371	Rhinopithecus_roxellana
ENSSPUG00000002064	SMG7	99	86.926	ENSSBOG00000023454	SMG7	100	86.249	Saimiri_boliviensis_boliviensis
ENSSPUG00000002064	SMG7	99	89.744	ENSSHAG00000013147	SMG7	99	89.664	Sarcophilus_harrisii
ENSSPUG00000002064	SMG7	99	68.320	ENSSFOG00015017252	smg7	100	67.520	Scleropages_formosus
ENSSPUG00000002064	SMG7	99	65.030	ENSSMAG00000006067	smg7	100	64.324	Scophthalmus_maximus
ENSSPUG00000002064	SMG7	63	73.151	ENSSDUG00000017543	smg7	99	65.166	Seriola_dumerili
ENSSPUG00000002064	SMG7	98	66.284	ENSSPAG00000008733	smg7	98	66.667	Stegastes_partitus
ENSSPUG00000002064	SMG7	99	86.396	ENSSSCG00000015558	SMG7	99	86.572	Sus_scrofa
ENSSPUG00000002064	SMG7	99	91.101	ENSTGUG00000003928	SMG7	100	91.101	Taeniopygia_guttata
ENSSPUG00000002064	SMG7	97	63.596	ENSTNIG00000002802	smg7	92	63.596	Tetraodon_nigroviridis
ENSSPUG00000002064	SMG7	78	84.615	ENSTBEG00000003220	SMG7	71	84.615	Tupaia_belangeri
ENSSPUG00000002064	SMG7	96	82.096	ENSTTRG00000014778	SMG7	94	82.271	Tursiops_truncatus
ENSSPUG00000002064	SMG7	96	85.532	ENSUAMG00000017473	SMG7	100	85.623	Ursus_americanus
ENSSPUG00000002064	SMG7	96	85.532	ENSUMAG00000016389	SMG7	100	85.623	Ursus_maritimus
ENSSPUG00000002064	SMG7	99	86.307	ENSVVUG00000008976	SMG7	99	86.396	Vulpes_vulpes
ENSSPUG00000002064	SMG7	99	70.833	ENSXETG00000012528	smg7	99	70.833	Xenopus_tropicalis
ENSSPUG00000002064	SMG7	99	63.997	ENSXMAG00000007123	smg7	99	64.630	Xiphophorus_maculatus