EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000002102 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 75972 bases
Position: chrQEPC01013748.1:4113168-4189139
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000002779	La	PF05383.17	5.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000002942	-	2013	-	ENSSPUP00000002779	670 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000002102's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000002102's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000002102	-	70	41.774	ENSSPUG00000016552	LARP4	90	38.842
ENSSPUG00000002102	-	100	90.504	ENSSPUG00000013734	-	100	90.356

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000002102	-	100	71.660	ENSG00000107929	LARP4B	100	71.660	Homo_sapiens
ENSSPUG00000002102	-	100	60.000	ENSAPOG00000020531	LARP4B	100	60.719	Acanthochromis_polyacanthus
ENSSPUG00000002102	-	100	71.390	ENSAMEG00000001810	LARP4B	100	71.255	Ailuropoda_melanoleuca
ENSSPUG00000002102	-	79	70.956	ENSAOCG00000007887	-	95	70.879	Amphiprion_ocellaris
ENSSPUG00000002102	-	96	60.137	ENSAPEG00000002512	LARP4B	98	59.264	Amphiprion_percula
ENSSPUG00000002102	-	100	57.510	ENSATEG00000012614	LARP4B	100	60.000	Anabas_testudineus
ENSSPUG00000002102	-	100	82.487	ENSAPLG00000003813	LARP4B	98	81.150	Anas_platyrhynchos
ENSSPUG00000002102	-	100	81.793	ENSACAG00000002858	LARP4B	100	81.793	Anolis_carolinensis
ENSSPUG00000002102	-	100	71.120	ENSANAG00000007531	-	100	71.120	Aotus_nancymaae
ENSSPUG00000002102	-	100	63.107	ENSACLG00000026356	LARP4B	100	63.384	Astatotilapia_calliptera
ENSSPUG00000002102	-	90	55.655	ENSAMXG00000003335	larp4b	93	55.423	Astyanax_mexicanus
ENSSPUG00000002102	-	100	73.018	ENSBTAG00000013899	LARP4B	100	73.018	Bos_taurus
ENSSPUG00000002102	-	100	71.120	ENSCJAG00000018434	LARP4B	100	71.120	Callithrix_jacchus
ENSSPUG00000002102	-	100	71.660	ENSCAFG00020004209	LARP4B	100	71.660	Canis_lupus_dingo
ENSSPUG00000002102	-	100	70.636	ENSCHIG00000013543	LARP4B	100	70.636	Capra_hircus
ENSSPUG00000002102	-	89	80.872	ENSTSYG00000002568	LARP4B	100	80.872	Carlito_syrichta
ENSSPUG00000002102	-	90	74.793	ENSCAPG00000009725	LARP4B	83	74.793	Cavia_aperea
ENSSPUG00000002102	-	100	73.549	ENSCPOG00000009375	LARP4B	100	73.549	Cavia_porcellus
ENSSPUG00000002102	-	100	70.850	ENSCCAG00000024869	LARP4B	100	70.850	Cebus_capucinus
ENSSPUG00000002102	-	100	71.795	ENSCATG00000019750	LARP4B	100	71.795	Cercocebus_atys
ENSSPUG00000002102	-	100	75.208	ENSCLAG00000011570	LARP4B	100	75.208	Chinchilla_lanigera
ENSSPUG00000002102	-	70	85.294	ENSCHOG00000007831	-	64	85.294	Choloepus_hoffmanni
ENSSPUG00000002102	-	100	83.813	ENSCPBG00000017063	LARP4B	100	83.813	Chrysemys_picta_bellii
ENSSPUG00000002102	-	100	69.906	ENSCANG00000038021	LARP4B	100	69.906	Colobus_angolensis_palliatus
ENSSPUG00000002102	-	100	73.217	ENSCGRG00001022930	Larp4b	100	73.217	Cricetulus_griseus_chok1gshd
ENSSPUG00000002102	-	100	73.217	ENSCGRG00000006022	Larp4b	100	73.217	Cricetulus_griseus_crigri
ENSSPUG00000002102	-	100	62.104	ENSCSEG00000007342	LARP4B	100	62.248	Cynoglossus_semilaevis
ENSSPUG00000002102	-	100	61.997	ENSCVAG00000008910	LARP4B	100	62.448	Cyprinodon_variegatus
ENSSPUG00000002102	-	94	51.719	ENSDARG00000062146	larp4b	93	52.798	Danio_rerio
ENSSPUG00000002102	-	96	78.035	ENSDNOG00000045543	-	100	75.050	Dasypus_novemcinctus
ENSSPUG00000002102	-	100	70.755	ENSDORG00000009328	Larp4b	100	70.755	Dipodomys_ordii
ENSSPUG00000002102	-	87	77.320	ENSETEG00000011249	LARP4B	91	77.320	Echinops_telfairi
ENSSPUG00000002102	-	100	72.200	ENSEASG00005019068	-	100	72.200	Equus_asinus_asinus
ENSSPUG00000002102	-	100	72.200	ENSECAG00000024040	LARP4B	100	72.200	Equus_caballus
ENSSPUG00000002102	-	100	70.525	ENSEEUG00000008391	LARP4B	98	70.659	Erinaceus_europaeus
ENSSPUG00000002102	-	91	63.790	ENSELUG00000008626	LARP4B	100	57.180	Esox_lucius
ENSSPUG00000002102	-	88	42.492	ENSELUG00000001417	-	94	42.308	Esox_lucius
ENSSPUG00000002102	-	100	71.871	ENSFCAG00000000721	-	100	71.871	Felis_catus
ENSSPUG00000002102	-	100	84.986	ENSFALG00000006961	LARP4B	100	84.986	Ficedula_albicollis
ENSSPUG00000002102	-	100	73.046	ENSFDAG00000006158	LARP4B	97	73.046	Fukomys_damarensis
ENSSPUG00000002102	-	50	41.989	ENSFHEG00000011539	-	80	41.989	Fundulus_heteroclitus
ENSSPUG00000002102	-	100	53.992	ENSFHEG00000013037	LARP4B	65	92.437	Fundulus_heteroclitus
ENSSPUG00000002102	-	76	69.372	ENSGMOG00000010818	-	98	56.465	Gadus_morhua
ENSSPUG00000002102	-	100	84.499	ENSGALG00000006672	LARP4B	100	83.676	Gallus_gallus
ENSSPUG00000002102	-	100	58.106	ENSGACG00000017535	LARP4B	98	58.634	Gasterosteus_aculeatus
ENSSPUG00000002102	-	93	84.118	ENSGAGG00000008598	LARP4B	100	84.118	Gopherus_agassizii
ENSSPUG00000002102	-	100	71.795	ENSGGOG00000003572	LARP4B	100	71.795	Gorilla_gorilla
ENSSPUG00000002102	-	100	62.881	ENSHBUG00000007535	LARP4B	100	62.968	Haplochromis_burtoni
ENSSPUG00000002102	-	100	73.387	ENSHGLG00000012936	LARP4B	100	75.832	Heterocephalus_glaber_female
ENSSPUG00000002102	-	87	64.229	ENSHGLG00100017261	-	100	64.229	Heterocephalus_glaber_male
ENSSPUG00000002102	-	100	73.450	ENSHGLG00100016220	-	100	73.450	Heterocephalus_glaber_male
ENSSPUG00000002102	-	99	59.684	ENSHCOG00000011581	LARP4B	89	59.971	Hippocampus_comes
ENSSPUG00000002102	-	91	54.940	ENSIPUG00000009705	larp4b	93	54.573	Ictalurus_punctatus
ENSSPUG00000002102	-	100	71.563	ENSSTOG00000000587	LARP4B	100	71.563	Ictidomys_tridecemlineatus
ENSSPUG00000002102	-	100	73.108	ENSJJAG00000020847	Larp4b	100	73.108	Jaculus_jaculus
ENSSPUG00000002102	-	100	63.674	ENSKMAG00000021674	LARP4B	100	63.900	Kryptolebias_marmoratus
ENSSPUG00000002102	-	80	63.226	ENSLBEG00000025293	-	88	58.218	Labrus_bergylta
ENSSPUG00000002102	-	89	79.866	ENSLACG00000009492	LARP4B	87	79.866	Latimeria_chalumnae
ENSSPUG00000002102	-	100	69.293	ENSLOCG00000012290	larp4b	100	69.429	Lepisosteus_oculatus
ENSSPUG00000002102	-	100	77.450	ENSLAFG00000015334	LARP4B	99	78.417	Loxodonta_africana
ENSSPUG00000002102	-	100	71.930	ENSMFAG00000001766	LARP4B	100	69.906	Macaca_fascicularis
ENSSPUG00000002102	-	100	71.930	ENSMMUG00000005279	LARP4B	100	71.930	Macaca_mulatta
ENSSPUG00000002102	-	100	71.795	ENSMNEG00000014019	LARP4B	100	69.771	Macaca_nemestrina
ENSSPUG00000002102	-	100	71.698	ENSMLEG00000035198	LARP4B	100	71.698	Mandrillus_leucophaeus
ENSSPUG00000002102	-	87	63.175	ENSMAMG00000013742	LARP4B	81	63.492	Mastacembelus_armatus
ENSSPUG00000002102	-	87	63.507	ENSMZEG00005014594	-	86	63.608	Maylandia_zebra
ENSSPUG00000002102	-	100	60.719	ENSMZEG00005006498	-	97	69.928	Maylandia_zebra
ENSSPUG00000002102	-	100	79.250	ENSMGAG00000005472	LARP4B	100	78.447	Meleagris_gallopavo
ENSSPUG00000002102	-	100	73.118	ENSMAUG00000021657	Larp4b	100	73.118	Mesocricetus_auratus
ENSSPUG00000002102	-	100	72.394	ENSMICG00000001301	LARP4B	100	72.676	Microcebus_murinus
ENSSPUG00000002102	-	100	63.243	ENSMOCG00000021452	Larp4b	100	63.378	Microtus_ochrogaster
ENSSPUG00000002102	-	100	60.951	ENSMMOG00000011253	-	100	61.583	Mola_mola
ENSSPUG00000002102	-	100	77.049	ENSMODG00000005957	LARP4B	100	77.186	Monodelphis_domestica
ENSSPUG00000002102	-	100	56.287	ENSMALG00000012432	LARP4B	100	57.456	Monopterus_albus
ENSSPUG00000002102	-	100	73.585	MGP_CAROLIEiJ_G0018216	Larp4b	100	73.720	Mus_caroli
ENSSPUG00000002102	-	100	73.253	ENSMUSG00000033499	Larp4b	100	73.387	Mus_musculus
ENSSPUG00000002102	-	100	73.450	MGP_PahariEiJ_G0019266	Larp4b	100	73.450	Mus_pahari
ENSSPUG00000002102	-	100	73.118	MGP_SPRETEiJ_G0019074	Larp4b	100	73.253	Mus_spretus
ENSSPUG00000002102	-	100	70.715	ENSMPUG00000016220	LARP4B	97	70.985	Mustela_putorius_furo
ENSSPUG00000002102	-	96	71.784	ENSMLUG00000005880	LARP4B	99	71.930	Myotis_lucifugus
ENSSPUG00000002102	-	100	71.930	ENSNGAG00000001750	Larp4b	100	71.930	Nannospalax_galili
ENSSPUG00000002102	-	100	53.879	ENSNBRG00000020018	LARP4B	100	54.161	Neolamprologus_brichardi
ENSSPUG00000002102	-	100	71.660	ENSNLEG00000013442	LARP4B	100	71.660	Nomascus_leucogenys
ENSSPUG00000002102	-	81	73.641	ENSMEUG00000013114	-	83	73.641	Notamacropus_eugenii
ENSSPUG00000002102	-	100	70.989	ENSOPRG00000003300	LARP4B	100	70.989	Ochotona_princeps
ENSSPUG00000002102	-	100	69.636	ENSODEG00000001109	LARP4B	100	70.445	Octodon_degus
ENSSPUG00000002102	-	100	58.065	ENSONIG00000017705	LARP4B	100	59.173	Oreochromis_niloticus
ENSSPUG00000002102	-	100	77.219	ENSOANG00000006100	LARP4B	100	76.821	Ornithorhynchus_anatinus
ENSSPUG00000002102	-	100	70.942	ENSOCUG00000004950	LARP4B	97	70.942	Oryctolagus_cuniculus
ENSSPUG00000002102	-	100	57.697	ENSORLG00000006080	LARP4B	100	57.956	Oryzias_latipes
ENSSPUG00000002102	-	100	62.170	ENSORLG00020020940	LARP4B	100	62.309	Oryzias_latipes_hni
ENSSPUG00000002102	-	100	62.151	ENSORLG00015020608	LARP4B	100	61.806	Oryzias_latipes_hsok
ENSSPUG00000002102	-	100	60.251	ENSOMEG00000019619	LARP4B	100	60.669	Oryzias_melastigma
ENSSPUG00000002102	-	96	72.399	ENSOGAG00000011540	LARP4B	99	72.399	Otolemur_garnettii
ENSSPUG00000002102	-	100	70.485	ENSOARG00000015320	LARP4B	98	70.485	Ovis_aries
ENSSPUG00000002102	-	100	71.525	ENSPPAG00000039232	LARP4B	100	71.525	Pan_paniscus
ENSSPUG00000002102	-	100	71.930	ENSPPRG00000009489	LARP4B	100	71.930	Panthera_pardus
ENSSPUG00000002102	-	100	71.930	ENSPTIG00000008543	LARP4B	100	71.930	Panthera_tigris_altaica
ENSSPUG00000002102	-	100	71.525	ENSPTRG00000002235	LARP4B	100	71.525	Pan_troglodytes
ENSSPUG00000002102	-	100	71.930	ENSPANG00000023546	LARP4B	100	69.906	Papio_anubis
ENSSPUG00000002102	-	99	59.091	ENSPKIG00000012368	LARP4B	99	59.225	Paramormyrops_kingsleyae
ENSSPUG00000002102	-	74	92.381	ENSPSIG00000005600	LARP4B	99	92.381	Pelodiscus_sinensis
ENSSPUG00000002102	-	88	58.281	ENSPMGG00000008261	LARP4B	83	58.594	Periophthalmus_magnuspinnatus
ENSSPUG00000002102	-	100	73.549	ENSPEMG00000014052	Larp4b	100	73.549	Peromyscus_maniculatus_bairdii
ENSSPUG00000002102	-	100	63.291	ENSPFOG00000000029	LARP4B	100	58.462	Poecilia_formosa
ENSSPUG00000002102	-	100	63.291	ENSPLAG00000002871	LARP4B	100	62.500	Poecilia_latipinna
ENSSPUG00000002102	-	100	63.291	ENSPMEG00000016361	LARP4B	100	62.707	Poecilia_mexicana
ENSSPUG00000002102	-	100	71.563	ENSPPYG00000002035	LARP4B	97	71.563	Pongo_abelii
ENSSPUG00000002102	-	100	71.896	ENSPCOG00000014688	LARP4B	100	71.896	Propithecus_coquereli
ENSSPUG00000002102	-	89	73.077	ENSPVAG00000009784	LARP4B	83	73.077	Pteropus_vampyrus
ENSSPUG00000002102	-	100	63.296	ENSPNYG00000024252	LARP4B	100	63.384	Pundamilia_nyererei
ENSSPUG00000002102	-	93	55.298	ENSPNAG00000028956	larp4b	95	55.007	Pygocentrus_nattereri
ENSSPUG00000002102	-	99	73.108	ENSRNOG00000015888	Larp4b	100	73.378	Rattus_norvegicus
ENSSPUG00000002102	-	100	71.351	ENSRBIG00000033294	LARP4B	100	71.660	Rhinopithecus_bieti
ENSSPUG00000002102	-	100	71.351	ENSRROG00000033879	LARP4B	100	71.660	Rhinopithecus_roxellana
ENSSPUG00000002102	-	100	66.127	ENSSBOG00000021109	LARP4B	100	66.127	Saimiri_boliviensis_boliviensis
ENSSPUG00000002102	-	100	79.086	ENSSHAG00000013392	LARP4B	100	79.086	Sarcophilus_harrisii
ENSSPUG00000002102	-	96	62.079	ENSSFOG00015003256	LARP4B	93	61.290	Scleropages_formosus
ENSSPUG00000002102	-	90	88.889	ENSSMAG00000005982	-	99	88.889	Scophthalmus_maximus
ENSSPUG00000002102	-	100	63.398	ENSSDUG00000006704	LARP4B	100	64.503	Seriola_dumerili
ENSSPUG00000002102	-	100	61.571	ENSSLDG00000020660	LARP4B	100	61.286	Seriola_lalandi_dorsalis
ENSSPUG00000002102	-	70	92.523	ENSSARG00000001243	-	79	92.523	Sorex_araneus
ENSSPUG00000002102	-	100	60.649	ENSSPAG00000014628	LARP4B	100	60.649	Stegastes_partitus
ENSSPUG00000002102	-	100	69.742	ENSSSCG00000011162	LARP4B	100	71.901	Sus_scrofa
ENSSPUG00000002102	-	100	84.732	ENSTGUG00000000811	-	100	84.732	Taeniopygia_guttata
ENSSPUG00000002102	-	100	56.356	ENSTNIG00000004571	-	98	57.068	Tetraodon_nigroviridis
ENSSPUG00000002102	-	99	55.118	ENSTNIG00000007991	LARP4B	99	55.861	Tetraodon_nigroviridis
ENSSPUG00000002102	-	89	73.131	ENSTTRG00000011151	LARP4B	90	73.131	Tursiops_truncatus
ENSSPUG00000002102	-	86	72.093	ENSUAMG00000016461	LARP4B	95	72.093	Ursus_americanus
ENSSPUG00000002102	-	100	71.525	ENSUMAG00000016127	LARP4B	100	71.390	Ursus_maritimus
ENSSPUG00000002102	-	50	90.503	ENSVPAG00000000128	-	64	90.503	Vicugna_pacos
ENSSPUG00000002102	-	100	71.525	ENSVVUG00000008641	LARP4B	100	71.525	Vulpes_vulpes
ENSSPUG00000002102	-	99	75.344	ENSXETG00000016882	larp4b	100	75.344	Xenopus_tropicalis
ENSSPUG00000002102	-	100	57.007	ENSXCOG00000019952	LARP4B	100	57.084	Xiphophorus_couchianus
ENSSPUG00000002102	-	100	62.917	ENSXMAG00000021533	LARP4B	100	62.917	Xiphophorus_maculatus