EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000002444 (Gene tree)
Gene ID: -
Gene Symbol: LIG4
Alias: -
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 3226 bases
Position: chrQEPC01002555.1:178458-181683
Accession: 6601
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000003143	RNA_ligase	PF09414.10	2.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000003340	LIG4-201	3226	-	ENSSPUP00000003143	840 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000002444's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000002444's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000002444	LIG4	100	77.725	ENSG00000174405	LIG4	100	77.725	Homo_sapiens
ENSSPUG00000002444	LIG4	100	69.286	ENSAPOG00000000866	lig4	92	69.405	Acanthochromis_polyacanthus
ENSSPUG00000002444	LIG4	100	75.000	ENSAMEG00000019685	LIG4	92	75.000	Ailuropoda_melanoleuca
ENSSPUG00000002444	LIG4	99	69.964	ENSACIG00000018309	lig4	92	70.083	Amphilophus_citrinellus
ENSSPUG00000002444	LIG4	100	68.929	ENSAOCG00000011768	lig4	92	69.048	Amphiprion_ocellaris
ENSSPUG00000002444	LIG4	100	69.048	ENSAPEG00000017815	lig4	92	69.167	Amphiprion_percula
ENSSPUG00000002444	LIG4	100	69.048	ENSATEG00000005583	lig4	92	69.167	Anabas_testudineus
ENSSPUG00000002444	LIG4	100	81.807	ENSAPLG00000001673	LIG4	96	81.807	Anas_platyrhynchos
ENSSPUG00000002444	LIG4	100	82.857	ENSACAG00000014566	LIG4	93	82.857	Anolis_carolinensis
ENSSPUG00000002444	LIG4	100	76.540	ENSANAG00000012446	LIG4	93	76.540	Aotus_nancymaae
ENSSPUG00000002444	LIG4	99	69.249	ENSACLG00000027051	lig4	92	69.249	Astatotilapia_calliptera
ENSSPUG00000002444	LIG4	100	68.929	ENSAMXG00000008192	lig4	87	68.929	Astyanax_mexicanus
ENSSPUG00000002444	LIG4	100	76.066	ENSBTAG00000015868	LIG4	93	76.066	Bos_taurus
ENSSPUG00000002444	LIG4	100	76.777	ENSCJAG00000014689	LIG4	93	76.777	Callithrix_jacchus
ENSSPUG00000002444	LIG4	100	76.540	ENSCAFG00000006031	LIG4	93	76.540	Canis_familiaris
ENSSPUG00000002444	LIG4	100	76.540	ENSCAFG00020021230	LIG4	93	76.540	Canis_lupus_dingo
ENSSPUG00000002444	LIG4	100	75.948	ENSCHIG00000001019	LIG4	93	75.948	Capra_hircus
ENSSPUG00000002444	LIG4	100	76.659	ENSCAPG00000006284	LIG4	93	76.659	Cavia_aperea
ENSSPUG00000002444	LIG4	100	76.540	ENSCPOG00000014266	LIG4	93	76.540	Cavia_porcellus
ENSSPUG00000002444	LIG4	100	76.896	ENSCCAG00000019971	LIG4	93	76.896	Cebus_capucinus
ENSSPUG00000002444	LIG4	100	77.844	ENSCATG00000021075	LIG4	93	77.844	Cercocebus_atys
ENSSPUG00000002444	LIG4	100	76.540	ENSCLAG00000003376	LIG4	93	76.540	Chinchilla_lanigera
ENSSPUG00000002444	LIG4	100	78.199	ENSCSAG00000000211	LIG4	93	78.199	Chlorocebus_sabaeus
ENSSPUG00000002444	LIG4	100	87.767	ENSCPBG00000023291	LIG4	92	87.767	Chrysemys_picta_bellii
ENSSPUG00000002444	LIG4	67	47.193	ENSCING00000009536	-	86	47.163	Ciona_intestinalis
ENSSPUG00000002444	LIG4	83	46.154	ENSCSAVG00000010336	-	91	46.011	Ciona_savignyi
ENSSPUG00000002444	LIG4	100	77.725	ENSCANG00000005805	LIG4	93	77.725	Colobus_angolensis_palliatus
ENSSPUG00000002444	LIG4	100	75.621	ENSCGRG00001012072	Lig4	93	75.621	Cricetulus_griseus_chok1gshd
ENSSPUG00000002444	LIG4	100	75.621	ENSCGRG00000013417	Lig4	93	75.621	Cricetulus_griseus_crigri
ENSSPUG00000002444	LIG4	97	69.523	ENSCSEG00000013905	lig4	88	69.523	Cynoglossus_semilaevis
ENSSPUG00000002444	LIG4	100	70.273	ENSCVAG00000007896	lig4	92	70.273	Cyprinodon_variegatus
ENSSPUG00000002444	LIG4	100	69.048	ENSDARG00000060620	lig4	92	69.048	Danio_rerio
ENSSPUG00000002444	LIG4	100	76.596	ENSDNOG00000000513	LIG4	93	76.596	Dasypus_novemcinctus
ENSSPUG00000002444	LIG4	100	76.540	ENSDORG00000027303	Lig4	93	76.540	Dipodomys_ordii
ENSSPUG00000002444	LIG4	85	33.066	FBgn0030506	Lig4	79	33.066	Drosophila_melanogaster
ENSSPUG00000002444	LIG4	100	73.728	ENSETEG00000015563	LIG4	94	73.728	Echinops_telfairi
ENSSPUG00000002444	LIG4	99	43.333	ENSEBUG00000014243	lig4	92	43.182	Eptatretus_burgeri
ENSSPUG00000002444	LIG4	100	76.422	ENSEASG00005022073	LIG4	93	76.422	Equus_asinus_asinus
ENSSPUG00000002444	LIG4	100	75.829	ENSECAG00000003257	LIG4	93	75.829	Equus_caballus
ENSSPUG00000002444	LIG4	100	70.344	ENSELUG00000006787	lig4	92	69.751	Esox_lucius
ENSSPUG00000002444	LIG4	100	75.829	ENSFCAG00000031985	LIG4	93	75.829	Felis_catus
ENSSPUG00000002444	LIG4	88	82.656	ENSFALG00000004214	LIG4	90	82.656	Ficedula_albicollis
ENSSPUG00000002444	LIG4	100	77.014	ENSFDAG00000008973	LIG4	93	77.014	Fukomys_damarensis
ENSSPUG00000002444	LIG4	100	68.571	ENSFHEG00000007398	lig4	83	68.690	Fundulus_heteroclitus
ENSSPUG00000002444	LIG4	85	66.250	ENSGMOG00000012843	lig4	92	66.250	Gadus_morhua
ENSSPUG00000002444	LIG4	100	81.688	ENSGALG00000016854	LIG4	92	81.688	Gallus_gallus
ENSSPUG00000002444	LIG4	99	68.490	ENSGAFG00000019779	lig4	88	68.728	Gambusia_affinis
ENSSPUG00000002444	LIG4	100	67.024	ENSGACG00000014135	lig4	92	67.024	Gasterosteus_aculeatus
ENSSPUG00000002444	LIG4	100	77.725	ENSGGOG00000027771	LIG4	93	77.725	Gorilla_gorilla
ENSSPUG00000002444	LIG4	99	69.011	ENSHBUG00000006245	lig4	92	69.011	Haplochromis_burtoni
ENSSPUG00000002444	LIG4	100	76.896	ENSHGLG00000000718	LIG4	93	76.896	Heterocephalus_glaber_female
ENSSPUG00000002444	LIG4	100	76.896	ENSHGLG00100003265	LIG4	93	76.896	Heterocephalus_glaber_male
ENSSPUG00000002444	LIG4	100	68.609	ENSHCOG00000012010	lig4	92	68.609	Hippocampus_comes
ENSSPUG00000002444	LIG4	100	68.452	ENSIPUG00000013748	lig4	92	68.452	Ictalurus_punctatus
ENSSPUG00000002444	LIG4	100	76.422	ENSSTOG00000024303	LIG4	93	76.422	Ictidomys_tridecemlineatus
ENSSPUG00000002444	LIG4	100	76.185	ENSJJAG00000006750	Lig4	93	76.185	Jaculus_jaculus
ENSSPUG00000002444	LIG4	100	67.262	ENSKMAG00000001149	lig4	92	67.262	Kryptolebias_marmoratus
ENSSPUG00000002444	LIG4	99	68.357	ENSLBEG00000014578	lig4	100	68.478	Labrus_bergylta
ENSSPUG00000002444	LIG4	100	76.429	ENSLACG00000003282	LIG4	92	76.310	Latimeria_chalumnae
ENSSPUG00000002444	LIG4	100	73.397	ENSLOCG00000008901	lig4	91	73.397	Lepisosteus_oculatus
ENSSPUG00000002444	LIG4	100	76.005	ENSLAFG00000031152	LIG4	93	76.005	Loxodonta_africana
ENSSPUG00000002444	LIG4	100	78.081	ENSMFAG00000037235	LIG4	93	78.081	Macaca_fascicularis
ENSSPUG00000002444	LIG4	100	77.844	ENSMMUG00000008874	LIG4	93	77.844	Macaca_mulatta
ENSSPUG00000002444	LIG4	100	78.081	ENSMNEG00000023575	LIG4	93	78.081	Macaca_nemestrina
ENSSPUG00000002444	LIG4	100	77.962	ENSMLEG00000026720	LIG4	93	77.962	Mandrillus_leucophaeus
ENSSPUG00000002444	LIG4	100	69.405	ENSMAMG00000008472	lig4	92	69.524	Mastacembelus_armatus
ENSSPUG00000002444	LIG4	99	69.249	ENSMZEG00005001855	lig4	92	69.249	Maylandia_zebra
ENSSPUG00000002444	LIG4	100	82.402	ENSMGAG00000015532	LIG4	92	82.402	Meleagris_gallopavo
ENSSPUG00000002444	LIG4	100	74.408	ENSMOCG00000019000	Lig4	93	74.408	Microtus_ochrogaster
ENSSPUG00000002444	LIG4	100	67.857	ENSMMOG00000004390	lig4	92	67.857	Mola_mola
ENSSPUG00000002444	LIG4	100	76.777	ENSMODG00000025064	LIG4	93	76.777	Monodelphis_domestica
ENSSPUG00000002444	LIG4	100	69.359	ENSMALG00000008555	lig4	92	69.359	Monopterus_albus
ENSSPUG00000002444	LIG4	100	75.948	MGP_CAROLIEiJ_G0030809	Lig4	93	75.948	Mus_caroli
ENSSPUG00000002444	LIG4	100	75.948	ENSMUSG00000049717	Lig4	93	75.948	Mus_musculus
ENSSPUG00000002444	LIG4	100	76.185	MGP_PahariEiJ_G0021270	Lig4	93	76.185	Mus_pahari
ENSSPUG00000002444	LIG4	100	76.066	MGP_SPRETEiJ_G0031917	Lig4	93	76.066	Mus_spretus
ENSSPUG00000002444	LIG4	100	75.474	ENSMPUG00000018675	LIG4	93	75.474	Mustela_putorius_furo
ENSSPUG00000002444	LIG4	100	76.896	ENSMLUG00000001267	LIG4	93	76.896	Myotis_lucifugus
ENSSPUG00000002444	LIG4	100	76.066	ENSNGAG00000013258	Lig4	93	76.066	Nannospalax_galili
ENSSPUG00000002444	LIG4	99	69.368	ENSNBRG00000021252	lig4	92	69.487	Neolamprologus_brichardi
ENSSPUG00000002444	LIG4	100	77.251	ENSNLEG00000007888	LIG4	93	77.251	Nomascus_leucogenys
ENSSPUG00000002444	LIG4	100	74.526	ENSOPRG00000005765	LIG4	93	74.526	Ochotona_princeps
ENSSPUG00000002444	LIG4	100	76.185	ENSODEG00000019683	LIG4	93	76.185	Octodon_degus
ENSSPUG00000002444	LIG4	99	68.892	ENSONIG00000011969	lig4	91	69.011	Oreochromis_niloticus
ENSSPUG00000002444	LIG4	100	76.066	ENSOCUG00000015734	LIG4	93	76.066	Oryctolagus_cuniculus
ENSSPUG00000002444	LIG4	100	67.734	ENSORLG00000004041	lig4	92	67.734	Oryzias_latipes
ENSSPUG00000002444	LIG4	100	68.090	ENSORLG00020019607	lig4	92	68.090	Oryzias_latipes_hni
ENSSPUG00000002444	LIG4	100	67.616	ENSORLG00015017754	lig4	92	67.616	Oryzias_latipes_hsok
ENSSPUG00000002444	LIG4	73	74.026	ENSOMEG00000003459	lig4	89	74.026	Oryzias_melastigma
ENSSPUG00000002444	LIG4	100	76.540	ENSOGAG00000032120	LIG4	92	76.540	Otolemur_garnettii
ENSSPUG00000002444	LIG4	81	79.204	ENSOARG00000005590	LIG4	90	79.204	Ovis_aries
ENSSPUG00000002444	LIG4	100	77.488	ENSPPAG00000032998	LIG4	93	77.488	Pan_paniscus
ENSSPUG00000002444	LIG4	100	76.185	ENSPPRG00000017804	LIG4	93	76.185	Panthera_pardus
ENSSPUG00000002444	LIG4	100	76.066	ENSPTIG00000010051	LIG4	93	76.066	Panthera_tigris_altaica
ENSSPUG00000002444	LIG4	100	77.607	ENSPTRG00000006025	LIG4	93	77.607	Pan_troglodytes
ENSSPUG00000002444	LIG4	100	77.962	ENSPANG00000007562	LIG4	93	77.962	Papio_anubis
ENSSPUG00000002444	LIG4	100	69.524	ENSPKIG00000011645	lig4	91	69.524	Paramormyrops_kingsleyae
ENSSPUG00000002444	LIG4	100	87.143	ENSPSIG00000001504	LIG4	92	87.143	Pelodiscus_sinensis
ENSSPUG00000002444	LIG4	100	66.944	ENSPMGG00000013486	lig4	92	66.944	Periophthalmus_magnuspinnatus
ENSSPUG00000002444	LIG4	100	75.858	ENSPEMG00000000076	Lig4	93	75.858	Peromyscus_maniculatus_bairdii
ENSSPUG00000002444	LIG4	100	77.396	ENSPCIG00000021882	LIG4	93	77.041	Phascolarctos_cinereus
ENSSPUG00000002444	LIG4	100	69.048	ENSPFOG00000000797	lig4	92	69.286	Poecilia_formosa
ENSSPUG00000002444	LIG4	100	68.929	ENSPLAG00000001196	lig4	92	69.167	Poecilia_latipinna
ENSSPUG00000002444	LIG4	100	69.167	ENSPMEG00000021353	lig4	92	69.405	Poecilia_mexicana
ENSSPUG00000002444	LIG4	100	68.690	ENSPREG00000007323	lig4	92	68.929	Poecilia_reticulata
ENSSPUG00000002444	LIG4	100	77.725	ENSPPYG00000005540	LIG4	93	77.725	Pongo_abelii
ENSSPUG00000002444	LIG4	100	76.422	ENSPVAG00000016403	LIG4	93	76.422	Pteropus_vampyrus
ENSSPUG00000002444	LIG4	99	69.130	ENSPNYG00000009660	lig4	92	69.130	Pundamilia_nyererei
ENSSPUG00000002444	LIG4	100	69.405	ENSPNAG00000028056	lig4	92	69.405	Pygocentrus_nattereri
ENSSPUG00000002444	LIG4	100	69.405	ENSPNAG00000028069	LIG4	92	69.405	Pygocentrus_nattereri
ENSSPUG00000002444	LIG4	100	75.118	ENSRNOG00000014605	Lig4	93	75.118	Rattus_norvegicus
ENSSPUG00000002444	LIG4	99	77.791	ENSRBIG00000039962	LIG4	93	77.791	Rhinopithecus_bieti
ENSSPUG00000002444	LIG4	100	77.607	ENSRROG00000006040	LIG4	93	77.607	Rhinopithecus_roxellana
ENSSPUG00000002444	LIG4	100	76.422	ENSSBOG00000019029	LIG4	93	76.422	Saimiri_boliviensis_boliviensis
ENSSPUG00000002444	LIG4	100	74.793	ENSSHAG00000009525	LIG4	92	74.793	Sarcophilus_harrisii
ENSSPUG00000002444	LIG4	100	70.155	ENSSFOG00015012835	lig4	92	70.155	Scleropages_formosus
ENSSPUG00000002444	LIG4	100	65.952	ENSSMAG00000011267	lig4	92	65.952	Scophthalmus_maximus
ENSSPUG00000002444	LIG4	100	68.921	ENSSDUG00000010343	lig4	92	68.839	Seriola_dumerili
ENSSPUG00000002444	LIG4	100	67.378	ENSSLDG00000003239	lig4	92	67.417	Seriola_lalandi_dorsalis
ENSSPUG00000002444	LIG4	100	73.585	ENSSARG00000006573	LIG4	93	73.585	Sorex_araneus
ENSSPUG00000002444	LIG4	100	69.286	ENSSPAG00000001609	lig4	92	69.286	Stegastes_partitus
ENSSPUG00000002444	LIG4	100	75.919	ENSSSCG00000009540	LIG4	93	75.919	Sus_scrofa
ENSSPUG00000002444	LIG4	100	80.262	ENSTGUG00000010795	LIG4	93	80.262	Taeniopygia_guttata
ENSSPUG00000002444	LIG4	100	68.690	ENSTRUG00000009984	lig4	92	68.690	Takifugu_rubripes
ENSSPUG00000002444	LIG4	100	68.571	ENSTNIG00000010348	lig4	92	68.810	Tetraodon_nigroviridis
ENSSPUG00000002444	LIG4	100	77.962	ENSTBEG00000017741	LIG4	93	77.962	Tupaia_belangeri
ENSSPUG00000002444	LIG4	100	76.185	ENSTTRG00000012660	LIG4	93	76.185	Tursiops_truncatus
ENSSPUG00000002444	LIG4	100	74.763	ENSUAMG00000003773	LIG4	93	74.763	Ursus_americanus
ENSSPUG00000002444	LIG4	100	74.881	ENSXETG00000002654	lig4	92	74.881	Xenopus_tropicalis
ENSSPUG00000002444	LIG4	100	68.690	ENSXCOG00000017401	lig4	92	68.929	Xiphophorus_couchianus
ENSSPUG00000002444	LIG4	100	68.810	ENSXMAG00000015142	lig4	92	69.048	Xiphophorus_maculatus