EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000002464 (Gene tree)
Gene ID: -
Gene Symbol: SRSF5
Alias: HRS|SFRS5|SRP40
Full Name: serine and arginine rich splicing factor 5
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 4563 bases
Position: chrQEPC01012458.1:2706203-2710765
Accession: 10787
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000003190	RRM_1	PF00076.22	2.3e-31	1	2
ENSSPUP00000003190	RRM_1	PF00076.22	2.3e-31	2	2
ENSSPUP00000003206	RRM_1	PF00076.22	2.3e-31	1	2
ENSSPUP00000003206	RRM_1	PF00076.22	2.3e-31	2	2
ENSSPUP00000003222	RRM_1	PF00076.22	2.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000003420	SRSF5-203	681	-	ENSSPUP00000003222	147 (aa)	-	-
ENSSPUT00000003404	SRSF5-202	1577	-	ENSSPUP00000003206	275 (aa)	-	-
ENSSPUT00000003388	SRSF5-201	1507	-	ENSSPUP00000003190	275 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000002464's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000002464's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000002464	SRSF5	51	47.561	ENSSPUG00000010430	SRSF3	74	40.800
ENSSPUG00000002464	SRSF5	88	55.814	ENSSPUG00000004967	SRSF6	50	70.149
ENSSPUG00000002464	SRSF5	90	68.421	ENSSPUG00000002052	-	68	68.449
ENSSPUG00000002464	SRSF5	66	40.107	ENSSPUG00000000804	-	87	40.741
ENSSPUG00000002464	SRSF5	61	37.714	ENSSPUG00000015680	SRSF9	66	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000002464	SRSF5	100	93.197	ENSG00000100650	SRSF5	100	100.000	Homo_sapiens
ENSSPUG00000002464	SRSF5	90	72.662	ENSAPOG00000008642	srsf5b	63	82.540	Acanthochromis_polyacanthus
ENSSPUG00000002464	SRSF5	90	91.729	ENSAMEG00000014574	SRSF5	100	91.815	Ailuropoda_melanoleuca
ENSSPUG00000002464	SRSF5	94	70.068	ENSACIG00000010742	srsf5b	87	71.329	Amphilophus_citrinellus
ENSSPUG00000002464	SRSF5	90	72.662	ENSAOCG00000005719	srsf5b	63	82.540	Amphiprion_ocellaris
ENSSPUG00000002464	SRSF5	90	72.662	ENSAPEG00000007830	srsf5b	63	82.540	Amphiprion_percula
ENSSPUG00000002464	SRSF5	90	71.942	ENSATEG00000019112	srsf5b	63	84.656	Anabas_testudineus
ENSSPUG00000002464	SRSF5	98	91.822	ENSAPLG00000014681	SRSF5	100	92.000	Anas_platyrhynchos
ENSSPUG00000002464	SRSF5	100	94.203	ENSACAG00000005143	SRSF5	100	94.203	Anolis_carolinensis
ENSSPUG00000002464	SRSF5	100	93.197	ENSANAG00000027977	-	100	100.000	Aotus_nancymaae
ENSSPUG00000002464	SRSF5	91	89.552	ENSANAG00000037529	-	95	90.840	Aotus_nancymaae
ENSSPUG00000002464	SRSF5	99	69.366	ENSACLG00000026424	srsf5b	63	81.481	Astatotilapia_calliptera
ENSSPUG00000002464	SRSF5	93	75.000	ENSAMXG00000011932	srsf5b	88	78.102	Astyanax_mexicanus
ENSSPUG00000002464	SRSF5	90	91.729	ENSBTAG00000011596	SRSF5	100	91.815	Bos_taurus
ENSSPUG00000002464	SRSF5	100	93.197	ENSCJAG00000014884	SRSF5	100	100.000	Callithrix_jacchus
ENSSPUG00000002464	SRSF5	90	91.729	ENSCAFG00000016589	SRSF5	100	91.815	Canis_familiaris
ENSSPUG00000002464	SRSF5	90	91.729	ENSCAFG00020005661	SRSF5	100	91.815	Canis_lupus_dingo
ENSSPUG00000002464	SRSF5	95	89.773	ENSCHIG00000016794	SRSF5	93	93.182	Capra_hircus
ENSSPUG00000002464	SRSF5	100	93.878	ENSTSYG00000007786	SRSF5	100	100.000	Carlito_syrichta
ENSSPUG00000002464	SRSF5	100	88.339	ENSCAPG00000008801	SRSF5	100	91.519	Cavia_aperea
ENSSPUG00000002464	SRSF5	100	87.986	ENSCPOG00000039926	SRSF5	100	91.873	Cavia_porcellus
ENSSPUG00000002464	SRSF5	100	93.197	ENSCCAG00000029002	SRSF5	100	100.000	Cebus_capucinus
ENSSPUG00000002464	SRSF5	100	93.197	ENSCATG00000045051	SRSF5	100	100.000	Cercocebus_atys
ENSSPUG00000002464	SRSF5	89	94.286	ENSCLAG00000004755	SRSF5	100	92.832	Chinchilla_lanigera
ENSSPUG00000002464	SRSF5	90	91.729	ENSCSAG00000013041	SRSF5	100	91.103	Chlorocebus_sabaeus
ENSSPUG00000002464	SRSF5	100	94.909	ENSCPBG00000021653	SRSF5	100	94.909	Chrysemys_picta_bellii
ENSSPUG00000002464	SRSF5	100	93.197	ENSCANG00000030560	SRSF5	100	100.000	Colobus_angolensis_palliatus
ENSSPUG00000002464	SRSF5	90	91.729	ENSCGRG00001015339	Srsf5	100	84.892	Cricetulus_griseus_chok1gshd
ENSSPUG00000002464	SRSF5	90	91.729	ENSCGRG00000009833	Srsf5	100	91.756	Cricetulus_griseus_crigri
ENSSPUG00000002464	SRSF5	90	71.631	ENSCSEG00000003801	srsf5b	64	84.293	Cynoglossus_semilaevis
ENSSPUG00000002464	SRSF5	89	72.263	ENSCVAG00000017240	srsf5b	57	80.829	Cyprinodon_variegatus
ENSSPUG00000002464	SRSF5	93	77.941	ENSDARG00000027734	srsf5b	90	78.626	Danio_rerio
ENSSPUG00000002464	SRSF5	90	91.729	ENSDNOG00000006160	SRSF5	90	92.800	Dasypus_novemcinctus
ENSSPUG00000002464	SRSF5	90	91.729	ENSDORG00000003989	Srsf5	100	84.173	Dipodomys_ordii
ENSSPUG00000002464	SRSF5	90	75.188	ENSETEG00000020396	SRSF5	100	83.154	Echinops_telfairi
ENSSPUG00000002464	SRSF5	90	57.895	ENSEBUG00000006229	srsf5b	68	63.102	Eptatretus_burgeri
ENSSPUG00000002464	SRSF5	90	91.729	ENSEASG00005016615	SRSF5	100	91.815	Equus_asinus_asinus
ENSSPUG00000002464	SRSF5	100	93.878	ENSECAG00000026873	SRSF5	100	93.878	Equus_caballus
ENSSPUG00000002464	SRSF5	93	70.000	ENSELUG00000019852	srsf5b	88	69.333	Esox_lucius
ENSSPUG00000002464	SRSF5	100	93.878	ENSFCAG00000008848	SRSF5	99	100.000	Felis_catus
ENSSPUG00000002464	SRSF5	89	85.366	ENSFALG00000004979	SRSF5	100	89.818	Ficedula_albicollis
ENSSPUG00000002464	SRSF5	90	91.729	ENSFDAG00000011562	SRSF5	100	89.964	Fukomys_damarensis
ENSSPUG00000002464	SRSF5	89	71.533	ENSFHEG00000009476	srsf5b	60	78.756	Fundulus_heteroclitus
ENSSPUG00000002464	SRSF5	89	69.655	ENSGMOG00000000595	srsf5b	97	70.270	Gadus_morhua
ENSSPUG00000002464	SRSF5	100	91.156	ENSGALG00000009421	SRSF5	100	91.156	Gallus_gallus
ENSSPUG00000002464	SRSF5	96	69.825	ENSGAFG00000002865	srsf5b	61	84.127	Gambusia_affinis
ENSSPUG00000002464	SRSF5	98	63.291	ENSGACG00000007834	srsf5b	89	71.233	Gasterosteus_aculeatus
ENSSPUG00000002464	SRSF5	100	94.909	ENSGAGG00000004447	SRSF5	100	94.909	Gopherus_agassizii
ENSSPUG00000002464	SRSF5	100	93.197	ENSGGOG00000016462	SRSF5	100	100.000	Gorilla_gorilla
ENSSPUG00000002464	SRSF5	89	73.723	ENSHBUG00000012462	srsf5b	93	75.940	Haplochromis_burtoni
ENSSPUG00000002464	SRSF5	90	90.977	ENSHGLG00000010147	SRSF5	100	92.115	Heterocephalus_glaber_female
ENSSPUG00000002464	SRSF5	100	56.884	ENSHGLG00100000095	-	62	62.295	Heterocephalus_glaber_male
ENSSPUG00000002464	SRSF5	90	90.977	ENSHGLG00100015328	SRSF5	100	92.115	Heterocephalus_glaber_male
ENSSPUG00000002464	SRSF5	90	67.133	ENSHCOG00000005592	srsf5b	64	75.127	Hippocampus_comes
ENSSPUG00000002464	SRSF5	90	91.729	ENSSTOG00000020672	SRSF5	100	92.473	Ictidomys_tridecemlineatus
ENSSPUG00000002464	SRSF5	90	91.729	ENSJJAG00000001688	Srsf5	100	91.459	Jaculus_jaculus
ENSSPUG00000002464	SRSF5	93	74.453	ENSKMAG00000020486	srsf5b	87	72.993	Kryptolebias_marmoratus
ENSSPUG00000002464	SRSF5	89	71.223	ENSLBEG00000013647	srsf5b	63	79.581	Labrus_bergylta
ENSSPUG00000002464	SRSF5	90	79.259	ENSLACG00000005874	SRSF5	67	86.842	Latimeria_chalumnae
ENSSPUG00000002464	SRSF5	98	72.325	ENSLOCG00000012438	srsf5b	69	82.447	Lepisosteus_oculatus
ENSSPUG00000002464	SRSF5	90	90.977	ENSLAFG00000005260	SRSF5	100	88.968	Loxodonta_africana
ENSSPUG00000002464	SRSF5	100	93.197	ENSMFAG00000002393	SRSF5	100	100.000	Macaca_fascicularis
ENSSPUG00000002464	SRSF5	100	93.197	ENSMNEG00000030872	SRSF5	100	100.000	Macaca_nemestrina
ENSSPUG00000002464	SRSF5	100	93.197	ENSMLEG00000030017	SRSF5	100	100.000	Mandrillus_leucophaeus
ENSSPUG00000002464	SRSF5	88	74.803	ENSMAMG00000002673	srsf5b	63	83.598	Mastacembelus_armatus
ENSSPUG00000002464	SRSF5	99	69.366	ENSMZEG00005003550	srsf5b	63	81.481	Maylandia_zebra
ENSSPUG00000002464	SRSF5	76	69.856	ENSMGAG00000011835	SRSF5	100	86.864	Meleagris_gallopavo
ENSSPUG00000002464	SRSF5	90	91.729	ENSMAUG00000009544	Srsf5	100	91.756	Mesocricetus_auratus
ENSSPUG00000002464	SRSF5	100	93.878	ENSMICG00000037432	-	100	100.000	Microcebus_murinus
ENSSPUG00000002464	SRSF5	50	100.000	ENSMICG00000046738	-	86	80.583	Microcebus_murinus
ENSSPUG00000002464	SRSF5	90	91.729	ENSMOCG00000013134	Srsf5	100	91.398	Microtus_ochrogaster
ENSSPUG00000002464	SRSF5	95	71.631	ENSMMOG00000000137	srsf5b	97	62.857	Mola_mola
ENSSPUG00000002464	SRSF5	100	93.818	ENSMODG00000011362	SRSF5	100	93.818	Monodelphis_domestica
ENSSPUG00000002464	SRSF5	93	72.028	ENSMALG00000021875	srsf5b	88	74.101	Monopterus_albus
ENSSPUG00000002464	SRSF5	90	91.729	ENSMUSG00000021134	Srsf5	96	97.727	Mus_musculus
ENSSPUG00000002464	SRSF5	90	91.729	MGP_PahariEiJ_G0029659	Srsf5	100	91.756	Mus_pahari
ENSSPUG00000002464	SRSF5	90	91.729	ENSMPUG00000007458	SRSF5	100	91.815	Mustela_putorius_furo
ENSSPUG00000002464	SRSF5	90	91.729	ENSMLUG00000011939	SRSF5	93	81.784	Myotis_lucifugus
ENSSPUG00000002464	SRSF5	90	91.729	ENSNGAG00000010073	-	100	91.756	Nannospalax_galili
ENSSPUG00000002464	SRSF5	89	72.662	ENSNBRG00000001285	srsf5b	63	79.581	Neolamprologus_brichardi
ENSSPUG00000002464	SRSF5	100	93.197	ENSNLEG00000001615	SRSF5	100	100.000	Nomascus_leucogenys
ENSSPUG00000002464	SRSF5	90	91.729	ENSOPRG00000008286	SRSF5	93	89.259	Ochotona_princeps
ENSSPUG00000002464	SRSF5	100	93.141	ENSODEG00000013469	-	100	93.141	Octodon_degus
ENSSPUG00000002464	SRSF5	90	89.474	ENSODEG00000000700	-	68	92.553	Octodon_degus
ENSSPUG00000002464	SRSF5	99	69.366	ENSONIG00000005759	srsf5b	63	81.481	Oreochromis_niloticus
ENSSPUG00000002464	SRSF5	100	85.199	ENSOANG00000013336	SRSF5	100	88.087	Ornithorhynchus_anatinus
ENSSPUG00000002464	SRSF5	95	89.394	ENSOCUG00000009274	SRSF5	92	92.803	Oryctolagus_cuniculus
ENSSPUG00000002464	SRSF5	90	74.436	ENSORLG00000029854	srsf5b	58	78.646	Oryzias_latipes
ENSSPUG00000002464	SRSF5	94	69.203	ENSORLG00015001720	srsf5b	63	78.974	Oryzias_latipes_hsok
ENSSPUG00000002464	SRSF5	90	91.729	ENSOGAG00000015122	SRSF5	100	92.115	Otolemur_garnettii
ENSSPUG00000002464	SRSF5	100	93.197	ENSPPAG00000029921	SRSF5	100	100.000	Pan_paniscus
ENSSPUG00000002464	SRSF5	100	93.878	ENSPPRG00000012903	SRSF5	99	100.000	Panthera_pardus
ENSSPUG00000002464	SRSF5	100	93.878	ENSPTIG00000018589	SRSF5	99	100.000	Panthera_tigris_altaica
ENSSPUG00000002464	SRSF5	100	93.197	ENSPTRG00000006488	SRSF5	100	100.000	Pan_troglodytes
ENSSPUG00000002464	SRSF5	100	93.197	ENSPANG00000021091	SRSF5	100	100.000	Papio_anubis
ENSSPUG00000002464	SRSF5	100	94.545	ENSPSIG00000012522	SRSF5	100	94.545	Pelodiscus_sinensis
ENSSPUG00000002464	SRSF5	95	71.127	ENSPMGG00000021646	srsf5b	94	77.372	Periophthalmus_magnuspinnatus
ENSSPUG00000002464	SRSF5	90	91.729	ENSPEMG00000020173	Srsf5	100	84.892	Peromyscus_maniculatus_bairdii
ENSSPUG00000002464	SRSF5	89	57.746	ENSPMAG00000007790	srsf5b	67	64.767	Petromyzon_marinus
ENSSPUG00000002464	SRSF5	100	93.818	ENSPCIG00000011877	SRSF5	100	93.818	Phascolarctos_cinereus
ENSSPUG00000002464	SRSF5	96	68.531	ENSPFOG00000017700	srsf5b	74	70.386	Poecilia_formosa
ENSSPUG00000002464	SRSF5	96	68.293	ENSPLAG00000006480	srsf5b	75	70.000	Poecilia_latipinna
ENSSPUG00000002464	SRSF5	93	72.535	ENSPMEG00000012751	srsf5b	88	74.638	Poecilia_mexicana
ENSSPUG00000002464	SRSF5	96	69.825	ENSPREG00000010381	srsf5b	61	83.598	Poecilia_reticulata
ENSSPUG00000002464	SRSF5	90	91.729	ENSPPYG00000005945	SRSF5	100	91.103	Pongo_abelii
ENSSPUG00000002464	SRSF5	90	90.977	ENSPCAG00000004405	SRSF5	100	93.548	Procavia_capensis
ENSSPUG00000002464	SRSF5	100	93.878	ENSPCOG00000014442	SRSF5	100	93.878	Propithecus_coquereli
ENSSPUG00000002464	SRSF5	99	64.982	ENSPNYG00000002669	srsf5b	94	75.940	Pundamilia_nyererei
ENSSPUG00000002464	SRSF5	93	74.286	ENSPNAG00000011262	srsf5b	88	77.372	Pygocentrus_nattereri
ENSSPUG00000002464	SRSF5	90	91.729	ENSRNOG00000005513	Srsf5	100	84.892	Rattus_norvegicus
ENSSPUG00000002464	SRSF5	100	93.197	ENSRBIG00000013003	SRSF5	100	100.000	Rhinopithecus_bieti
ENSSPUG00000002464	SRSF5	100	93.197	ENSRROG00000043407	SRSF5	100	100.000	Rhinopithecus_roxellana
ENSSPUG00000002464	SRSF5	100	93.197	ENSSBOG00000030784	SRSF5	100	100.000	Saimiri_boliviensis_boliviensis
ENSSPUG00000002464	SRSF5	100	93.818	ENSSHAG00000002871	SRSF5	100	93.818	Sarcophilus_harrisii
ENSSPUG00000002464	SRSF5	89	68.966	ENSSMAG00000019728	srsf5b	61	78.713	Scophthalmus_maximus
ENSSPUG00000002464	SRSF5	96	70.863	ENSSDUG00000005766	srsf5b	65	84.127	Seriola_dumerili
ENSSPUG00000002464	SRSF5	94	71.956	ENSSLDG00000023255	srsf5b	88	74.638	Seriola_lalandi_dorsalis
ENSSPUG00000002464	SRSF5	100	79.928	ENSSARG00000001059	SRSF5	100	82.796	Sorex_araneus
ENSSPUG00000002464	SRSF5	90	72.662	ENSSPAG00000015325	srsf5b	63	82.011	Stegastes_partitus
ENSSPUG00000002464	SRSF5	90	91.729	ENSSSCG00000032583	SRSF5	100	91.103	Sus_scrofa
ENSSPUG00000002464	SRSF5	90	85.484	ENSTGUG00000011425	SRSF5	100	90.545	Taeniopygia_guttata
ENSSPUG00000002464	SRSF5	89	78.626	ENSTRUG00000017811	srsf5b	59	83.511	Takifugu_rubripes
ENSSPUG00000002464	SRSF5	90	76.692	ENSTNIG00000016411	srsf5b	66	82.979	Tetraodon_nigroviridis
ENSSPUG00000002464	SRSF5	100	84.912	ENSTBEG00000001972	SRSF5	100	87.719	Tupaia_belangeri
ENSSPUG00000002464	SRSF5	95	89.734	ENSTTRG00000003318	SRSF5	93	93.156	Tursiops_truncatus
ENSSPUG00000002464	SRSF5	90	91.729	ENSUAMG00000014184	SRSF5	100	91.815	Ursus_americanus
ENSSPUG00000002464	SRSF5	90	91.729	ENSUMAG00000009827	SRSF5	100	83.571	Ursus_maritimus
ENSSPUG00000002464	SRSF5	90	91.729	ENSVPAG00000006448	SRSF5	100	92.473	Vicugna_pacos
ENSSPUG00000002464	SRSF5	90	91.729	ENSVVUG00000003790	SRSF5	100	91.815	Vulpes_vulpes
ENSSPUG00000002464	SRSF5	95	79.182	ENSXETG00000002211	srsf5	100	86.268	Xenopus_tropicalis
ENSSPUG00000002464	SRSF5	89	73.188	ENSXCOG00000001570	srsf5b	90	62.963	Xiphophorus_couchianus
ENSSPUG00000002464	SRSF5	93	72.119	ENSXMAG00000026416	srsf5b	88	73.381	Xiphophorus_maculatus