EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000002526 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 5143 bases
Position: chrQEPC01015423.1:4449518-4454660
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000003305	MMR_HSR1	PF01926.23	2.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000003506	-	654	-	ENSSPUP00000003305	217 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000002526's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000002526's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000002526	-	80	41.618	ENSSPUG00000000617	RAB15	81	41.618
ENSSPUG00000002526	-	78	39.429	ENSSPUG00000017531	RAB9B	87	39.429
ENSSPUG00000002526	-	66	33.333	ENSSPUG00000018361	RHEB	83	33.333
ENSSPUG00000002526	-	93	31.863	ENSSPUG00000014551	RAB36	88	31.034
ENSSPUG00000002526	-	66	30.464	ENSSPUG00000005315	RASL11A	63	30.464
ENSSPUG00000002526	-	95	39.423	ENSSPUG00000016258	RAB35	98	39.130
ENSSPUG00000002526	-	71	43.506	ENSSPUG00000003439	RAB31	79	43.506
ENSSPUG00000002526	-	71	30.968	ENSSPUG00000016774	RRAS2	88	31.928
ENSSPUG00000002526	-	94	82.266	ENSSPUG00000013698	RAB11A	100	82.266
ENSSPUG00000002526	-	75	34.969	ENSSPUG00000006274	RAB23	73	36.571
ENSSPUG00000002526	-	71	32.919	ENSSPUG00000015007	RAB29	78	32.919
ENSSPUG00000002526	-	94	40.196	ENSSPUG00000014873	RAB5B	91	40.196
ENSSPUG00000002526	-	80	45.143	ENSSPUG00000000552	RAB39B	82	45.143
ENSSPUG00000002526	-	71	34.194	ENSSPUG00000001533	-	73	34.194
ENSSPUG00000002526	-	75	39.521	ENSSPUG00000013564	-	83	39.521
ENSSPUG00000002526	-	70	34.194	ENSSPUG00000008958	NRAS	87	34.940
ENSSPUG00000002526	-	86	45.455	ENSSPUG00000012822	RAB1A	91	45.455
ENSSPUG00000002526	-	69	34.000	ENSSPUG00000003341	-	85	34.783
ENSSPUG00000002526	-	69	35.333	ENSSPUG00000005243	HRAS	84	36.025
ENSSPUG00000002526	-	87	45.685	ENSSPUG00000018803	RAB14	86	45.685
ENSSPUG00000002526	-	95	44.444	ENSSPUG00000007945	RAB1B	98	44.444
ENSSPUG00000002526	-	75	39.521	ENSSPUG00000003459	-	83	39.521
ENSSPUG00000002526	-	69	34.000	ENSSPUG00000018789	-	86	34.356
ENSSPUG00000002526	-	80	44.828	ENSSPUG00000017677	-	84	44.828
ENSSPUG00000002526	-	76	38.506	ENSSPUG00000005574	RAB33A	76	38.506
ENSSPUG00000002526	-	94	41.667	ENSSPUG00000012950	-	90	41.667
ENSSPUG00000002526	-	100	76.712	ENSSPUG00000002243	-	100	76.712
ENSSPUG00000002526	-	56	46.721	ENSSPUG00000015409	RAB17	56	46.721
ENSSPUG00000002526	-	80	41.143	ENSSPUG00000010337	RAB42	82	41.143
ENSSPUG00000002526	-	71	35.484	ENSSPUG00000017301	RAB6A	75	35.484
ENSSPUG00000002526	-	93	38.614	ENSSPUG00000000017	RAB22A	97	38.614
ENSSPUG00000002526	-	76	41.463	ENSSPUG00000006349	RAB30	80	41.463
ENSSPUG00000002526	-	80	45.402	ENSSPUG00000001173	RAB5A	86	45.402
ENSSPUG00000002526	-	77	44.048	ENSSPUG00000010896	-	97	38.756
ENSSPUG00000002526	-	75	42.073	ENSSPUG00000003222	RAB12	77	39.474
ENSSPUG00000002526	-	89	36.683	ENSSPUG00000008120	RAB33B	84	36.683
ENSSPUG00000002526	-	76	38.150	ENSSPUG00000004262	RAB7A	83	38.150
ENSSPUG00000002526	-	84	49.730	ENSSPUG00000010112	RAB2B	98	45.070
ENSSPUG00000002526	-	66	32.877	ENSSPUG00000017750	MRAS	75	34.395
ENSSPUG00000002526	-	94	61.765	ENSSPUG00000002555	RAB25	100	61.765
ENSSPUG00000002526	-	55	30.894	ENSSPUG00000008413	ARL4A	60	30.894

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000002526	-	99	79.167	ENSAPOG00000008251	rab11al	99	79.167	Acanthochromis_polyacanthus
ENSSPUG00000002526	-	99	77.778	ENSACIG00000017403	rab11al	99	77.778	Amphilophus_citrinellus
ENSSPUG00000002526	-	97	79.621	ENSAOCG00000015678	rab11al	97	81.095	Amphiprion_ocellaris
ENSSPUG00000002526	-	97	79.621	ENSAPEG00000022135	rab11al	97	79.621	Amphiprion_percula
ENSSPUG00000002526	-	99	78.140	ENSATEG00000006156	rab11al	99	78.140	Anabas_testudineus
ENSSPUG00000002526	-	99	78.241	ENSACLG00000010268	rab11al	97	80.392	Astatotilapia_calliptera
ENSSPUG00000002526	-	93	77.228	ENSAMXG00000024632	rab11al	92	77.228	Astyanax_mexicanus
ENSSPUG00000002526	-	94	92.118	ENSCPBG00000025819	-	99	92.118	Chrysemys_picta_bellii
ENSSPUG00000002526	-	99	78.241	ENSCSEG00000011996	rab11al	99	78.241	Cynoglossus_semilaevis
ENSSPUG00000002526	-	99	78.241	ENSCVAG00000020016	rab11al	99	78.241	Cyprinodon_variegatus
ENSSPUG00000002526	-	98	81.132	ENSDARG00000014340	rab11al	98	81.132	Danio_rerio
ENSSPUG00000002526	-	99	78.241	ENSELUG00000012035	rab11al	99	78.241	Esox_lucius
ENSSPUG00000002526	-	100	88.479	ENSFALG00000002594	-	92	88.479	Ficedula_albicollis
ENSSPUG00000002526	-	94	80.976	ENSFHEG00000000832	rab11al	98	80.976	Fundulus_heteroclitus
ENSSPUG00000002526	-	93	80.100	ENSGMOG00000006450	rab11al	99	80.100	Gadus_morhua
ENSSPUG00000002526	-	100	85.253	ENSGALG00000037802	-	50	85.253	Gallus_gallus
ENSSPUG00000002526	-	99	78.704	ENSGAFG00000021725	rab11al	99	78.704	Gambusia_affinis
ENSSPUG00000002526	-	98	78.774	ENSGACG00000013259	rab11al	98	78.774	Gasterosteus_aculeatus
ENSSPUG00000002526	-	100	88.018	ENSGAGG00000020702	-	100	88.018	Gopherus_agassizii
ENSSPUG00000002526	-	99	78.241	ENSHBUG00000009333	rab11al	99	78.241	Haplochromis_burtoni
ENSSPUG00000002526	-	98	78.302	ENSHCOG00000000232	rab11al	98	78.302	Hippocampus_comes
ENSSPUG00000002526	-	99	78.241	ENSIPUG00000006091	RAB11A	99	78.241	Ictalurus_punctatus
ENSSPUG00000002526	-	99	77.315	ENSKMAG00000015516	rab11al	99	77.315	Kryptolebias_marmoratus
ENSSPUG00000002526	-	99	78.704	ENSLBEG00000016417	rab11al	99	78.704	Labrus_bergylta
ENSSPUG00000002526	-	98	80.189	ENSLACG00000011380	rab11al	97	80.189	Latimeria_chalumnae
ENSSPUG00000002526	-	99	80.000	ENSLOCG00000008865	rab11al	99	80.000	Lepisosteus_oculatus
ENSSPUG00000002526	-	99	78.241	ENSMAMG00000010278	rab11al	99	78.241	Mastacembelus_armatus
ENSSPUG00000002526	-	99	78.241	ENSMZEG00005017514	rab11al	99	78.241	Maylandia_zebra
ENSSPUG00000002526	-	72	96.178	ENSMGAG00000004720	-	93	96.178	Meleagris_gallopavo
ENSSPUG00000002526	-	79	87.135	ENSMMOG00000017117	rab11al	83	87.135	Mola_mola
ENSSPUG00000002526	-	99	77.315	ENSMALG00000004093	rab11al	99	77.315	Monopterus_albus
ENSSPUG00000002526	-	99	78.241	ENSNBRG00000005116	rab11al	99	78.241	Neolamprologus_brichardi
ENSSPUG00000002526	-	99	77.778	ENSONIG00000002281	rab11al	99	77.778	Oreochromis_niloticus
ENSSPUG00000002526	-	99	78.241	ENSORLG00000016126	rab11al	99	78.241	Oryzias_latipes
ENSSPUG00000002526	-	99	78.241	ENSORLG00020013747	rab11al	99	78.241	Oryzias_latipes_hni
ENSSPUG00000002526	-	99	78.241	ENSORLG00015019591	rab11al	99	78.241	Oryzias_latipes_hsok
ENSSPUG00000002526	-	99	78.605	ENSOMEG00000020271	rab11al	99	78.605	Oryzias_melastigma
ENSSPUG00000002526	-	99	77.209	ENSPKIG00000020893	rab11al	99	77.209	Paramormyrops_kingsleyae
ENSSPUG00000002526	-	100	87.558	ENSPSIG00000013143	-	100	87.558	Pelodiscus_sinensis
ENSSPUG00000002526	-	97	78.673	ENSPMGG00000004220	rab11al	86	90.840	Periophthalmus_magnuspinnatus
ENSSPUG00000002526	-	99	78.704	ENSPFOG00000011316	rab11al	99	78.704	Poecilia_formosa
ENSSPUG00000002526	-	99	78.704	ENSPLAG00000007986	rab11al	99	78.704	Poecilia_latipinna
ENSSPUG00000002526	-	99	78.704	ENSPMEG00000000804	rab11al	99	78.704	Poecilia_mexicana
ENSSPUG00000002526	-	99	78.704	ENSPREG00000017324	rab11al	99	78.704	Poecilia_reticulata
ENSSPUG00000002526	-	99	78.241	ENSPNYG00000018244	rab11al	99	78.241	Pundamilia_nyererei
ENSSPUG00000002526	-	98	80.660	ENSPNAG00000029085	rab11al	98	80.660	Pygocentrus_nattereri
ENSSPUG00000002526	-	97	78.673	ENSSFOG00015008618	rab11al	97	78.673	Scleropages_formosus
ENSSPUG00000002526	-	99	77.778	ENSSMAG00000016206	rab11al	99	77.778	Scophthalmus_maximus
ENSSPUG00000002526	-	98	78.774	ENSSDUG00000006278	rab11al	98	78.774	Seriola_dumerili
ENSSPUG00000002526	-	98	78.774	ENSSLDG00000012116	rab11al	98	78.774	Seriola_lalandi_dorsalis
ENSSPUG00000002526	-	98	78.774	ENSSPAG00000012044	rab11al	98	78.774	Stegastes_partitus
ENSSPUG00000002526	-	94	94.581	ENSTGUG00000003680	-	100	94.581	Taeniopygia_guttata
ENSSPUG00000002526	-	98	78.302	ENSTRUG00000007556	rab11al	94	88.276	Takifugu_rubripes
ENSSPUG00000002526	-	99	78.241	ENSXCOG00000004226	rab11al	99	78.241	Xiphophorus_couchianus
ENSSPUG00000002526	-	99	78.241	ENSXMAG00000027071	rab11al	99	78.241	Xiphophorus_maculatus