EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000002556 (Gene tree)
Gene ID: -
Gene Symbol: NOM1
Alias: C7orf3|PPP1R113|SGD1
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 21517 bases
Position: chrQEPC01011998.1:4649494-4671010
Accession: 13244
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000003446	MA3	PF02847.17	9.7e-27	1	1
ENSSPUP00000003438	MA3	PF02847.17	1.2e-26	1	1
ENSSPUP00000003431	MA3	PF02847.17	3.5e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000003650	NOM1-202	1440	-	ENSSPUP00000003438	479 (aa)	-	-
ENSSPUT00000003643	NOM1-201	2340	-	ENSSPUP00000003431	779 (aa)	-	-
ENSSPUT00000003660	NOM1-203	1266	-	ENSSPUP00000003446	421 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000002556's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000002556's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000002556	NOM1	97	62.804	ENSG00000146909	NOM1	83	56.510	Homo_sapiens
ENSSPUG00000002556	NOM1	90	68.571	ENSAPOG00000012073	nom1	87	49.148	Acanthochromis_polyacanthus
ENSSPUG00000002556	NOM1	99	57.588	ENSAMEG00000001412	NOM1	98	52.774	Ailuropoda_melanoleuca
ENSSPUG00000002556	NOM1	90	68.868	ENSACIG00000018050	nom1	81	50.424	Amphilophus_citrinellus
ENSSPUG00000002556	NOM1	90	68.571	ENSAOCG00000006229	nom1	85	48.123	Amphiprion_ocellaris
ENSSPUG00000002556	NOM1	90	68.571	ENSAPEG00000015994	nom1	85	48.340	Amphiprion_percula
ENSSPUG00000002556	NOM1	100	67.143	ENSATEG00000005405	nom1	85	49.118	Anabas_testudineus
ENSSPUG00000002556	NOM1	97	65.602	ENSAPLG00000006585	NOM1	100	59.078	Anas_platyrhynchos
ENSSPUG00000002556	NOM1	90	81.703	ENSACAG00000011192	NOM1	99	55.876	Anolis_carolinensis
ENSSPUG00000002556	NOM1	100	55.350	ENSACLG00000000033	nom1	86	50.000	Astatotilapia_calliptera
ENSSPUG00000002556	NOM1	90	65.204	ENSAMXG00000041486	nom1	87	46.354	Astyanax_mexicanus
ENSSPUG00000002556	NOM1	89	70.927	ENSBTAG00000016435	NOM1	84	53.171	Bos_taurus
ENSSPUG00000002556	NOM1	99	60.752	ENSCJAG00000004336	NOM1	83	57.085	Callithrix_jacchus
ENSSPUG00000002556	NOM1	99	58.628	ENSCAFG00020005121	NOM1	84	53.836	Canis_lupus_dingo
ENSSPUG00000002556	NOM1	89	70.382	ENSCHIG00000020102	NOM1	96	50.237	Capra_hircus
ENSSPUG00000002556	NOM1	89	76.677	ENSTSYG00000000227	NOM1	83	57.065	Carlito_syrichta
ENSSPUG00000002556	NOM1	87	75.410	ENSCAPG00000016273	NOM1	99	61.111	Cavia_aperea
ENSSPUG00000002556	NOM1	99	63.371	ENSCPOG00000025538	NOM1	80	57.372	Cavia_porcellus
ENSSPUG00000002556	NOM1	97	57.143	ENSCCAG00000014944	NOM1	88	76.038	Cebus_capucinus
ENSSPUG00000002556	NOM1	86	75.410	ENSCLAG00000000267	NOM1	83	53.485	Chinchilla_lanigera
ENSSPUG00000002556	NOM1	90	85.489	ENSCPBG00000018215	NOM1	89	61.374	Chrysemys_picta_bellii
ENSSPUG00000002556	NOM1	95	35.577	ENSCING00000005248	-	96	33.108	Ciona_intestinalis
ENSSPUG00000002556	NOM1	98	61.852	ENSCANG00000041984	NOM1	91	63.569	Colobus_angolensis_palliatus
ENSSPUG00000002556	NOM1	99	60.543	ENSCGRG00001020293	Nom1	82	55.850	Cricetulus_griseus_chok1gshd
ENSSPUG00000002556	NOM1	99	57.620	ENSCGRG00000005405	Nom1	97	62.261	Cricetulus_griseus_crigri
ENSSPUG00000002556	NOM1	81	68.571	ENSCSEG00000000932	nom1	81	48.143	Cynoglossus_semilaevis
ENSSPUG00000002556	NOM1	90	68.571	ENSCVAG00000007562	nom1	86	47.197	Cyprinodon_variegatus
ENSSPUG00000002556	NOM1	90	67.610	ENSDARG00000060027	nom1	100	54.970	Danio_rerio
ENSSPUG00000002556	NOM1	88	72.857	ENSDORG00000015682	Nom1	99	44.429	Dipodomys_ordii
ENSSPUG00000002556	NOM1	90	40.752	FBgn0035336	CG9004	81	33.154	Drosophila_melanogaster
ENSSPUG00000002556	NOM1	72	59.524	ENSETEG00000003104	NOM1	75	58.786	Echinops_telfairi
ENSSPUG00000002556	NOM1	79	50.877	ENSEBUG00000010077	nom1	75	50.877	Eptatretus_burgeri
ENSSPUG00000002556	NOM1	89	76.677	ENSEASG00005001489	NOM1	83	57.844	Equus_asinus_asinus
ENSSPUG00000002556	NOM1	89	76.677	ENSECAG00000007596	NOM1	78	57.392	Equus_caballus
ENSSPUG00000002556	NOM1	90	68.553	ENSELUG00000006266	nom1	87	50.199	Esox_lucius
ENSSPUG00000002556	NOM1	99	59.667	ENSFCAG00000006467	NOM1	97	53.697	Felis_catus
ENSSPUG00000002556	NOM1	90	77.603	ENSFALG00000006904	NOM1	100	60.357	Ficedula_albicollis
ENSSPUG00000002556	NOM1	86	72.131	ENSFDAG00000016241	NOM1	85	53.151	Fukomys_damarensis
ENSSPUG00000002556	NOM1	100	52.459	ENSFHEG00000015974	nom1	89	48.674	Fundulus_heteroclitus
ENSSPUG00000002556	NOM1	98	61.176	ENSGMOG00000005129	nom1	91	47.580	Gadus_morhua
ENSSPUG00000002556	NOM1	90	78.571	ENSGALG00000006437	NOM1	81	59.438	Gallus_gallus
ENSSPUG00000002556	NOM1	100	52.469	ENSGAFG00000003211	nom1	86	47.473	Gambusia_affinis
ENSSPUG00000002556	NOM1	90	84.227	ENSGAGG00000014347	NOM1	98	62.782	Gopherus_agassizii
ENSSPUG00000002556	NOM1	89	76.358	ENSGGOG00000010920	NOM1	77	56.948	Gorilla_gorilla
ENSSPUG00000002556	NOM1	100	54.938	ENSHBUG00000014616	nom1	85	49.591	Haplochromis_burtoni
ENSSPUG00000002556	NOM1	91	72.990	ENSHGLG00000007392	NOM1	83	55.833	Heterocephalus_glaber_female
ENSSPUG00000002556	NOM1	91	72.990	ENSHGLG00100014407	NOM1	80	73.248	Heterocephalus_glaber_male
ENSSPUG00000002556	NOM1	73	63.376	ENSHCOG00000011999	-	90	60.350	Hippocampus_comes
ENSSPUG00000002556	NOM1	100	50.515	ENSIPUG00000013980	nom1	85	48.626	Ictalurus_punctatus
ENSSPUG00000002556	NOM1	92	80.328	ENSSTOG00000031736	NOM1	93	61.842	Ictidomys_tridecemlineatus
ENSSPUG00000002556	NOM1	87	77.049	ENSJJAG00000011716	Nom1	98	60.861	Jaculus_jaculus
ENSSPUG00000002556	NOM1	97	55.970	ENSLBEG00000009252	nom1	84	50.068	Labrus_bergylta
ENSSPUG00000002556	NOM1	90	74.448	ENSLACG00000011777	NOM1	86	54.184	Latimeria_chalumnae
ENSSPUG00000002556	NOM1	90	70.662	ENSLOCG00000012452	nom1	84	53.147	Lepisosteus_oculatus
ENSSPUG00000002556	NOM1	97	55.243	ENSLAFG00000007119	NOM1	85	51.827	Loxodonta_africana
ENSSPUG00000002556	NOM1	96	58.349	ENSMMUG00000039033	NOM1	83	53.306	Macaca_mulatta
ENSSPUG00000002556	NOM1	99	62.162	ENSMLEG00000037062	NOM1	99	63.925	Mandrillus_leucophaeus
ENSSPUG00000002556	NOM1	90	67.143	ENSMAMG00000004118	nom1	84	48.027	Mastacembelus_armatus
ENSSPUG00000002556	NOM1	100	55.350	ENSMZEG00005000384	nom1	86	50.000	Maylandia_zebra
ENSSPUG00000002556	NOM1	90	78.571	ENSMGAG00000005051	NOM1	100	60.784	Meleagris_gallopavo
ENSSPUG00000002556	NOM1	97	60.338	ENSMAUG00000017988	Nom1	86	55.256	Mesocricetus_auratus
ENSSPUG00000002556	NOM1	88	76.206	ENSMICG00000017531	NOM1	84	55.946	Microcebus_murinus
ENSSPUG00000002556	NOM1	86	77.049	ENSMOCG00000015962	Nom1	81	55.663	Microtus_ochrogaster
ENSSPUG00000002556	NOM1	90	67.143	ENSMMOG00000004419	nom1	85	45.479	Mola_mola
ENSSPUG00000002556	NOM1	96	80.128	ENSMODG00000005177	NOM1	86	57.652	Monodelphis_domestica
ENSSPUG00000002556	NOM1	79	70.480	ENSMALG00000008800	nom1	81	49.014	Monopterus_albus
ENSSPUG00000002556	NOM1	86	77.049	MGP_CAROLIEiJ_G0027043	Nom1	81	55.417	Mus_caroli
ENSSPUG00000002556	NOM1	86	78.689	ENSMUSG00000001569	Nom1	81	55.694	Mus_musculus
ENSSPUG00000002556	NOM1	86	78.689	MGP_SPRETEiJ_G0028039	Nom1	81	55.972	Mus_spretus
ENSSPUG00000002556	NOM1	89	70.607	ENSMPUG00000009745	NOM1	99	51.032	Mustela_putorius_furo
ENSSPUG00000002556	NOM1	89	74.841	ENSMLUG00000009129	NOM1	95	57.311	Myotis_lucifugus
ENSSPUG00000002556	NOM1	100	55.144	ENSNBRG00000016429	nom1	94	56.530	Neolamprologus_brichardi
ENSSPUG00000002556	NOM1	97	60.788	ENSNLEG00000000238	NOM1	96	51.882	Nomascus_leucogenys
ENSSPUG00000002556	NOM1	68	97.297	ENSMEUG00000001108	NOM1	72	62.570	Notamacropus_eugenii
ENSSPUG00000002556	NOM1	61	71.429	ENSOPRG00000014676	NOM1	85	53.333	Ochotona_princeps
ENSSPUG00000002556	NOM1	99	56.485	ENSODEG00000009399	NOM1	99	54.508	Octodon_degus
ENSSPUG00000002556	NOM1	97	55.993	ENSONIG00000005958	nom1	92	49.865	Oreochromis_niloticus
ENSSPUG00000002556	NOM1	84	81.034	ENSOANG00000006139	-	97	63.025	Ornithorhynchus_anatinus
ENSSPUG00000002556	NOM1	99	60.291	ENSOCUG00000004071	-	84	58.003	Oryctolagus_cuniculus
ENSSPUG00000002556	NOM1	91	61.465	ENSOCUG00000021448	-	92	47.767	Oryctolagus_cuniculus
ENSSPUG00000002556	NOM1	97	54.459	ENSORLG00000010541	nom1	84	49.088	Oryzias_latipes
ENSSPUG00000002556	NOM1	97	54.459	ENSORLG00020010789	nom1	91	48.815	Oryzias_latipes_hni
ENSSPUG00000002556	NOM1	89	66.667	ENSORLG00015010475	nom1	91	49.581	Oryzias_latipes_hsok
ENSSPUG00000002556	NOM1	99	57.330	ENSOMEG00000004219	nom1	83	52.023	Oryzias_melastigma
ENSSPUG00000002556	NOM1	89	74.760	ENSOGAG00000001124	NOM1	95	59.114	Otolemur_garnettii
ENSSPUG00000002556	NOM1	89	70.288	ENSOARG00000007261	NOM1	97	52.249	Ovis_aries
ENSSPUG00000002556	NOM1	89	77.143	ENSPPAG00000041374	NOM1	83	57.859	Pan_paniscus
ENSSPUG00000002556	NOM1	99	59.544	ENSPTIG00000013532	NOM1	97	54.484	Panthera_tigris_altaica
ENSSPUG00000002556	NOM1	89	76.038	ENSPTRG00000019917	NOM1	83	57.724	Pan_troglodytes
ENSSPUG00000002556	NOM1	99	59.875	ENSPANG00000007605	NOM1	96	53.927	Papio_anubis
ENSSPUG00000002556	NOM1	97	51.977	ENSPKIG00000005825	nom1	87	45.333	Paramormyrops_kingsleyae
ENSSPUG00000002556	NOM1	90	84.227	ENSPSIG00000017848	NOM1	96	67.791	Pelodiscus_sinensis
ENSSPUG00000002556	NOM1	94	66.981	ENSPMGG00000002577	nom1	83	49.446	Periophthalmus_magnuspinnatus
ENSSPUG00000002556	NOM1	86	77.049	ENSPEMG00000024180	Nom1	80	56.206	Peromyscus_maniculatus_bairdii
ENSSPUG00000002556	NOM1	62	55.986	ENSPMAG00000002136	-	97	56.890	Petromyzon_marinus
ENSSPUG00000002556	NOM1	89	80.000	ENSPCIG00000027941	NOM1	81	57.819	Phascolarctos_cinereus
ENSSPUG00000002556	NOM1	99	53.945	ENSPFOG00000015771	nom1	87	48.069	Poecilia_formosa
ENSSPUG00000002556	NOM1	100	70.000	ENSPLAG00000007856	nom1	86	47.467	Poecilia_latipinna
ENSSPUG00000002556	NOM1	100	68.571	ENSPMEG00000014155	nom1	87	48.069	Poecilia_mexicana
ENSSPUG00000002556	NOM1	100	70.000	ENSPREG00000008850	nom1	86	47.333	Poecilia_reticulata
ENSSPUG00000002556	NOM1	99	60.265	ENSPPYG00000018222	NOM1	96	51.874	Pongo_abelii
ENSSPUG00000002556	NOM1	86	46.809	ENSPCAG00000000440	NOM1	69	52.500	Procavia_capensis
ENSSPUG00000002556	NOM1	91	76.358	ENSPCOG00000015222	NOM1	99	62.477	Propithecus_coquereli
ENSSPUG00000002556	NOM1	88	70.740	ENSPVAG00000014760	NOM1	84	54.043	Pteropus_vampyrus
ENSSPUG00000002556	NOM1	100	54.938	ENSPNYG00000006975	nom1	95	56.180	Pundamilia_nyererei
ENSSPUG00000002556	NOM1	90	66.667	ENSPNAG00000011085	nom1	79	48.818	Pygocentrus_nattereri
ENSSPUG00000002556	NOM1	86	75.410	ENSRNOG00000048969	AABR07059041.1	86	51.913	Rattus_norvegicus
ENSSPUG00000002556	NOM1	97	61.754	ENSRBIG00000037042	NOM1	95	50.488	Rhinopithecus_bieti
ENSSPUG00000002556	NOM1	97	61.381	ENSRROG00000037293	NOM1	83	56.504	Rhinopithecus_roxellana
ENSSPUG00000002556	NOM1	89	80.000	ENSSHAG00000017998	-	99	59.944	Sarcophilus_harrisii
ENSSPUG00000002556	NOM1	73	56.934	ENSSHAG00000002835	-	99	57.908	Sarcophilus_harrisii
ENSSPUG00000002556	NOM1	100	53.459	ENSSFOG00015003196	nom1	100	54.268	Scleropages_formosus
ENSSPUG00000002556	NOM1	90	68.571	ENSSMAG00000011047	nom1	89	47.315	Scophthalmus_maximus
ENSSPUG00000002556	NOM1	90	70.000	ENSSDUG00000006834	nom1	82	49.321	Seriola_dumerili
ENSSPUG00000002556	NOM1	90	68.571	ENSSLDG00000021812	nom1	82	48.913	Seriola_lalandi_dorsalis
ENSSPUG00000002556	NOM1	90	68.571	ENSSPAG00000000953	nom1	89	47.771	Stegastes_partitus
ENSSPUG00000002556	NOM1	58	58.084	ENSTGUG00000016587	-	100	60.526	Taeniopygia_guttata
ENSSPUG00000002556	NOM1	90	77.287	ENSTGUG00000000702	-	100	56.653	Taeniopygia_guttata
ENSSPUG00000002556	NOM1	90	67.143	ENSTRUG00000010239	nom1	83	48.056	Takifugu_rubripes
ENSSPUG00000002556	NOM1	90	68.571	ENSTNIG00000012783	nom1	91	48.505	Tetraodon_nigroviridis
ENSSPUG00000002556	NOM1	97	60.261	ENSTTRG00000009691	NOM1	81	56.761	Tursiops_truncatus
ENSSPUG00000002556	NOM1	88	72.611	ENSUAMG00000025450	NOM1	95	45.881	Ursus_americanus
ENSSPUG00000002556	NOM1	88	72.611	ENSUMAG00000014275	NOM1	98	54.583	Ursus_maritimus
ENSSPUG00000002556	NOM1	99	58.836	ENSVVUG00000002608	NOM1	84	53.307	Vulpes_vulpes
ENSSPUG00000002556	NOM1	100	57.851	ENSXETG00000021611	nom1	97	49.299	Xenopus_tropicalis
ENSSPUG00000002556	NOM1	100	68.571	ENSXMAG00000002451	nom1	86	47.919	Xiphophorus_maculatus