EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000002619 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 19632 bases
Position: chrQEPC01013751.1:828087-847718
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000003428	PRP4	PF08799.11	4.4e-13	1	1
ENSSPUP00000003422	PRP4	PF08799.11	5.2e-13	1	1
ENSSPUP00000003428	Prp18	PF02840.15	1.4e-62	1	1
ENSSPUP00000003422	Prp18	PF02840.15	2.1e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000003639	-	2570	-	ENSSPUP00000003428	342 (aa)	-	-
ENSSPUT00000003634	-	2714	-	ENSSPUP00000003422	390 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000002619's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000002619's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000002619	-	100	92.690	ENSG00000165630	PRPF18	100	92.690	Homo_sapiens
ENSSPUG00000002619	-	100	85.088	ENSAPOG00000024177	prpf18	100	85.088	Acanthochromis_polyacanthus
ENSSPUG00000002619	-	100	92.105	ENSAMEG00000013591	-	100	92.105	Ailuropoda_melanoleuca
ENSSPUG00000002619	-	100	84.795	ENSACIG00000001186	prpf18	100	84.795	Amphilophus_citrinellus
ENSSPUG00000002619	-	98	84.776	ENSAOCG00000006572	prpf18	94	82.749	Amphiprion_ocellaris
ENSSPUG00000002619	-	100	85.088	ENSAPEG00000004564	prpf18	100	85.088	Amphiprion_percula
ENSSPUG00000002619	-	100	83.333	ENSATEG00000000303	prpf18	100	83.333	Anabas_testudineus
ENSSPUG00000002619	-	99	92.353	ENSAPLG00000003387	-	99	92.353	Anas_platyrhynchos
ENSSPUG00000002619	-	100	91.860	ENSACAG00000000818	-	100	91.860	Anolis_carolinensis
ENSSPUG00000002619	-	100	92.398	ENSANAG00000037445	-	100	92.398	Aotus_nancymaae
ENSSPUG00000002619	-	100	84.211	ENSACLG00000026296	prpf18	100	84.211	Astatotilapia_calliptera
ENSSPUG00000002619	-	100	84.286	ENSAMXG00000012848	prpf18	100	84.286	Astyanax_mexicanus
ENSSPUG00000002619	-	100	91.813	ENSBTAG00000017244	PRPF18	100	91.813	Bos_taurus
ENSSPUG00000002619	-	98	38.636	WBGene00009320	F32B6.3	97	38.636	Caenorhabditis_elegans
ENSSPUG00000002619	-	100	92.398	ENSCJAG00000009432	-	100	92.398	Callithrix_jacchus
ENSSPUG00000002619	-	100	92.105	ENSCAFG00000004735	-	100	92.105	Canis_familiaris
ENSSPUG00000002619	-	100	92.105	ENSCAFG00020007712	-	100	92.105	Canis_lupus_dingo
ENSSPUG00000002619	-	100	91.813	ENSCHIG00000000499	-	100	91.813	Capra_hircus
ENSSPUG00000002619	-	100	91.813	ENSTSYG00000003517	-	100	91.813	Carlito_syrichta
ENSSPUG00000002619	-	100	92.690	ENSCPOG00000021069	-	100	92.690	Cavia_porcellus
ENSSPUG00000002619	-	100	92.398	ENSCCAG00000036822	-	100	92.398	Cebus_capucinus
ENSSPUG00000002619	-	100	82.456	ENSCATG00000016633	-	100	82.456	Cercocebus_atys
ENSSPUG00000002619	-	100	92.105	ENSCLAG00000011770	-	100	92.105	Chinchilla_lanigera
ENSSPUG00000002619	-	100	90.313	ENSCSAG00000013109	-	100	90.313	Chlorocebus_sabaeus
ENSSPUG00000002619	-	100	90.449	ENSCPBG00000003100	-	100	91.011	Chrysemys_picta_bellii
ENSSPUG00000002619	-	99	55.685	ENSCING00000020481	-	97	54.651	Ciona_intestinalis
ENSSPUG00000002619	-	99	55.814	ENSCSAVG00000010546	-	99	55.523	Ciona_savignyi
ENSSPUG00000002619	-	100	92.690	ENSCANG00000034900	-	100	92.690	Colobus_angolensis_palliatus
ENSSPUG00000002619	-	100	92.690	ENSCGRG00001023665	Prpf18	100	92.690	Cricetulus_griseus_chok1gshd
ENSSPUG00000002619	-	100	92.690	ENSCGRG00000014690	Prpf18	100	92.690	Cricetulus_griseus_crigri
ENSSPUG00000002619	-	100	82.164	ENSCSEG00000005536	prpf18	100	81.714	Cynoglossus_semilaevis
ENSSPUG00000002619	-	100	83.626	ENSCVAG00000012401	prpf18	100	83.626	Cyprinodon_variegatus
ENSSPUG00000002619	-	100	85.088	ENSDARG00000058306	prpf18	100	85.088	Danio_rerio
ENSSPUG00000002619	-	100	92.398	ENSDNOG00000035607	-	100	92.398	Dasypus_novemcinctus
ENSSPUG00000002619	-	100	91.813	ENSDORG00000000858	Prpf18	100	91.813	Dipodomys_ordii
ENSSPUG00000002619	-	99	50.147	FBgn0027784	Prp18	98	50.147	Drosophila_melanogaster
ENSSPUG00000002619	-	100	81.579	ENSETEG00000015060	-	100	81.579	Echinops_telfairi
ENSSPUG00000002619	-	100	67.147	ENSEBUG00000016502	prpf18	99	66.571	Eptatretus_burgeri
ENSSPUG00000002619	-	100	92.398	ENSEASG00005019373	-	100	92.398	Equus_asinus_asinus
ENSSPUG00000002619	-	100	92.398	ENSECAG00000006997	PRPF18	100	92.398	Equus_caballus
ENSSPUG00000002619	-	73	100.000	ENSEEUG00000001171	-	100	58.228	Erinaceus_europaeus
ENSSPUG00000002619	-	100	83.090	ENSELUG00000022190	prpf18	100	83.090	Esox_lucius
ENSSPUG00000002619	-	100	92.105	ENSFCAG00000004436	-	100	92.105	Felis_catus
ENSSPUG00000002619	-	92	90.154	ENSFALG00000001912	-	97	90.462	Ficedula_albicollis
ENSSPUG00000002619	-	99	61.159	ENSFDAG00000010713	-	97	61.159	Fukomys_damarensis
ENSSPUG00000002619	-	93	94.671	ENSFDAG00000014026	-	99	94.671	Fukomys_damarensis
ENSSPUG00000002619	-	80	87.912	ENSFHEG00000020125	prpf18	98	88.015	Fundulus_heteroclitus
ENSSPUG00000002619	-	99	80.059	ENSGMOG00000012210	prpf18	99	80.059	Gadus_morhua
ENSSPUG00000002619	-	100	93.275	ENSGALG00000043593	-	100	93.275	Gallus_gallus
ENSSPUG00000002619	-	100	83.333	ENSGAFG00000006034	prpf18	100	83.333	Gambusia_affinis
ENSSPUG00000002619	-	100	81.579	ENSGACG00000012232	prpf18	100	81.579	Gasterosteus_aculeatus
ENSSPUG00000002619	-	100	94.152	ENSGAGG00000016878	-	100	94.152	Gopherus_agassizii
ENSSPUG00000002619	-	92	92.089	ENSGGOG00000025188	-	96	92.089	Gorilla_gorilla
ENSSPUG00000002619	-	100	84.211	ENSHBUG00000010264	prpf18	100	84.211	Haplochromis_burtoni
ENSSPUG00000002619	-	100	92.105	ENSHGLG00000018534	PRPF18	100	92.105	Heterocephalus_glaber_female
ENSSPUG00000002619	-	93	94.984	ENSHGLG00100012161	-	98	94.984	Heterocephalus_glaber_male
ENSSPUG00000002619	-	100	83.626	ENSHCOG00000015987	prpf18	100	83.626	Hippocampus_comes
ENSSPUG00000002619	-	100	82.153	ENSIPUG00000007432	prpf18	100	83.569	Ictalurus_punctatus
ENSSPUG00000002619	-	100	91.813	ENSSTOG00000008735	-	100	91.813	Ictidomys_tridecemlineatus
ENSSPUG00000002619	-	100	92.690	ENSJJAG00000024041	-	100	92.690	Jaculus_jaculus
ENSSPUG00000002619	-	100	66.859	ENSJJAG00000015191	-	100	82.781	Jaculus_jaculus
ENSSPUG00000002619	-	100	83.333	ENSKMAG00000012124	prpf18	100	83.333	Kryptolebias_marmoratus
ENSSPUG00000002619	-	97	82.440	ENSLBEG00000028466	prpf18	99	82.440	Labrus_bergylta
ENSSPUG00000002619	-	100	88.304	ENSLACG00000009885	prpf18	100	88.304	Latimeria_chalumnae
ENSSPUG00000002619	-	100	90.058	ENSLOCG00000016736	prpf18	100	90.058	Lepisosteus_oculatus
ENSSPUG00000002619	-	100	92.690	ENSLAFG00000007753	-	100	92.690	Loxodonta_africana
ENSSPUG00000002619	-	100	92.690	ENSMFAG00000000540	-	100	92.690	Macaca_fascicularis
ENSSPUG00000002619	-	100	92.690	ENSMMUG00000015071	PRPF18	100	92.690	Macaca_mulatta
ENSSPUG00000002619	-	100	92.690	ENSMNEG00000024679	-	100	92.690	Macaca_nemestrina
ENSSPUG00000002619	-	100	77.485	ENSMLEG00000031715	-	100	77.485	Mandrillus_leucophaeus
ENSSPUG00000002619	-	100	82.749	ENSMAMG00000006610	prpf18	100	82.749	Mastacembelus_armatus
ENSSPUG00000002619	-	100	84.211	ENSMZEG00005019392	prpf18	100	84.211	Maylandia_zebra
ENSSPUG00000002619	-	100	93.275	ENSMGAG00000005023	-	100	93.275	Meleagris_gallopavo
ENSSPUG00000002619	-	100	92.398	ENSMICG00000006572	-	97	96.711	Microcebus_murinus
ENSSPUG00000002619	-	100	92.690	ENSMOCG00000021468	Prpf18	100	92.690	Microtus_ochrogaster
ENSSPUG00000002619	-	100	84.211	ENSMMOG00000013012	prpf18	100	84.211	Mola_mola
ENSSPUG00000002619	-	100	82.164	ENSMODG00000024043	-	100	82.164	Monodelphis_domestica
ENSSPUG00000002619	-	96	88.166	ENSMODG00000016902	-	92	88.166	Monodelphis_domestica
ENSSPUG00000002619	-	100	77.168	ENSMALG00000005486	prpf18	100	77.457	Monopterus_albus
ENSSPUG00000002619	-	100	92.105	MGP_CAROLIEiJ_G0023143	Prpf18	100	95.890	Mus_caroli
ENSSPUG00000002619	-	100	91.813	ENSMUSG00000039449	Prpf18	100	95.890	Mus_musculus
ENSSPUG00000002619	-	100	92.398	MGP_PahariEiJ_G0019203	Prpf18	100	95.890	Mus_pahari
ENSSPUG00000002619	-	100	91.520	MGP_SPRETEiJ_G0024061	Prpf18	100	95.890	Mus_spretus
ENSSPUG00000002619	-	100	91.813	ENSMPUG00000000938	-	100	91.813	Mustela_putorius_furo
ENSSPUG00000002619	-	100	91.813	ENSMLUG00000009200	-	100	91.813	Myotis_lucifugus
ENSSPUG00000002619	-	100	92.105	ENSNGAG00000012500	-	100	92.105	Nannospalax_galili
ENSSPUG00000002619	-	67	89.130	ENSNGAG00000023550	-	82	89.130	Nannospalax_galili
ENSSPUG00000002619	-	100	84.211	ENSNBRG00000001778	prpf18	100	84.211	Neolamprologus_brichardi
ENSSPUG00000002619	-	100	92.690	ENSNLEG00000012186	-	100	92.690	Nomascus_leucogenys
ENSSPUG00000002619	-	100	64.035	ENSMEUG00000005032	-	100	64.035	Notamacropus_eugenii
ENSSPUG00000002619	-	77	75.094	ENSOPRG00000002153	-	100	75.094	Ochotona_princeps
ENSSPUG00000002619	-	100	92.690	ENSODEG00000003770	-	100	92.690	Octodon_degus
ENSSPUG00000002619	-	98	83.582	ENSONIG00000014854	prpf18	96	83.582	Oreochromis_niloticus
ENSSPUG00000002619	-	100	92.690	ENSOANG00000015404	-	100	92.690	Ornithorhynchus_anatinus
ENSSPUG00000002619	-	100	92.398	ENSOCUG00000027756	-	93	95.298	Oryctolagus_cuniculus
ENSSPUG00000002619	-	100	81.714	ENSORLG00000010293	prpf18	100	81.714	Oryzias_latipes
ENSSPUG00000002619	-	100	83.626	ENSORLG00020001530	prpf18	100	83.626	Oryzias_latipes_hni
ENSSPUG00000002619	-	100	83.333	ENSORLG00015013705	prpf18	100	83.333	Oryzias_latipes_hsok
ENSSPUG00000002619	-	100	85.673	ENSOMEG00000009167	prpf18	100	85.673	Oryzias_melastigma
ENSSPUG00000002619	-	100	91.813	ENSOGAG00000007294	-	100	91.813	Otolemur_garnettii
ENSSPUG00000002619	-	100	89.459	ENSOARG00000006243	-	100	89.459	Ovis_aries
ENSSPUG00000002619	-	100	92.690	ENSPPAG00000041959	-	100	92.690	Pan_paniscus
ENSSPUG00000002619	-	100	92.105	ENSPPRG00000000107	-	100	92.105	Panthera_pardus
ENSSPUG00000002619	-	100	92.398	ENSPTIG00000021094	-	100	92.398	Panthera_tigris_altaica
ENSSPUG00000002619	-	100	92.690	ENSPTRG00000002306	PRPF18	100	92.690	Pan_troglodytes
ENSSPUG00000002619	-	100	92.398	ENSPANG00000023346	-	100	92.398	Papio_anubis
ENSSPUG00000002619	-	88	98.113	ENSPKIG00000014128	prpf18	96	81.766	Paramormyrops_kingsleyae
ENSSPUG00000002619	-	100	94.444	ENSPSIG00000016064	-	100	94.444	Pelodiscus_sinensis
ENSSPUG00000002619	-	100	79.532	ENSPMGG00000016486	prpf18	100	86.624	Periophthalmus_magnuspinnatus
ENSSPUG00000002619	-	100	92.398	ENSPEMG00000013704	Prpf18	100	92.398	Peromyscus_maniculatus_bairdii
ENSSPUG00000002619	-	100	74.138	ENSPMAG00000000204	prpf18	100	74.138	Petromyzon_marinus
ENSSPUG00000002619	-	92	93.354	ENSPCIG00000012963	-	99	93.354	Phascolarctos_cinereus
ENSSPUG00000002619	-	100	81.714	ENSPFOG00000017611	prpf18	100	81.714	Poecilia_formosa
ENSSPUG00000002619	-	100	83.041	ENSPLAG00000000369	prpf18	100	83.041	Poecilia_latipinna
ENSSPUG00000002619	-	100	83.041	ENSPMEG00000005183	prpf18	100	83.041	Poecilia_mexicana
ENSSPUG00000002619	-	100	83.041	ENSPREG00000015232	prpf18	100	83.041	Poecilia_reticulata
ENSSPUG00000002619	-	100	92.398	ENSPPYG00000002101	PRPF18	100	92.398	Pongo_abelii
ENSSPUG00000002619	-	100	74.269	ENSPCAG00000010833	-	100	74.269	Procavia_capensis
ENSSPUG00000002619	-	100	85.673	ENSPCOG00000013057	-	100	85.673	Propithecus_coquereli
ENSSPUG00000002619	-	100	55.848	ENSPVAG00000002947	-	86	75.839	Pteropus_vampyrus
ENSSPUG00000002619	-	100	83.918	ENSPNYG00000003554	prpf18	100	83.918	Pundamilia_nyererei
ENSSPUG00000002619	-	100	84.615	ENSPNAG00000023151	prpf18	100	84.615	Pygocentrus_nattereri
ENSSPUG00000002619	-	100	92.982	ENSRNOG00000018396	Prpf18	100	92.982	Rattus_norvegicus
ENSSPUG00000002619	-	100	92.398	ENSRBIG00000028028	-	100	92.398	Rhinopithecus_bieti
ENSSPUG00000002619	-	100	92.690	ENSRROG00000040695	-	100	92.690	Rhinopithecus_roxellana
ENSSPUG00000002619	-	100	92.398	ENSSBOG00000034482	-	100	92.398	Saimiri_boliviensis_boliviensis
ENSSPUG00000002619	-	100	93.567	ENSSHAG00000016463	-	100	93.567	Sarcophilus_harrisii
ENSSPUG00000002619	-	100	74.854	ENSSHAG00000009669	-	100	74.854	Sarcophilus_harrisii
ENSSPUG00000002619	-	77	44.528	ENSSFOG00015021154	-	87	58.779	Scleropages_formosus
ENSSPUG00000002619	-	98	82.609	ENSSFOG00015022118	prpf18	100	82.286	Scleropages_formosus
ENSSPUG00000002619	-	100	82.749	ENSSMAG00000005308	prpf18	100	82.749	Scophthalmus_maximus
ENSSPUG00000002619	-	100	84.211	ENSSDUG00000015428	prpf18	100	84.211	Seriola_dumerili
ENSSPUG00000002619	-	100	84.211	ENSSLDG00000023989	prpf18	100	84.211	Seriola_lalandi_dorsalis
ENSSPUG00000002619	-	100	61.988	ENSSARG00000005307	-	86	80.165	Sorex_araneus
ENSSPUG00000002619	-	100	83.918	ENSSPAG00000019502	prpf18	100	83.918	Stegastes_partitus
ENSSPUG00000002619	-	100	92.105	ENSSSCG00000026354	-	100	92.105	Sus_scrofa
ENSSPUG00000002619	-	100	93.567	ENSTGUG00000002286	-	100	93.567	Taeniopygia_guttata
ENSSPUG00000002619	-	100	82.456	ENSTRUG00000011278	prpf18	100	82.456	Takifugu_rubripes
ENSSPUG00000002619	-	100	83.626	ENSTNIG00000000911	prpf18	100	83.626	Tetraodon_nigroviridis
ENSSPUG00000002619	-	82	100.000	ENSTBEG00000013011	-	79	100.000	Tupaia_belangeri
ENSSPUG00000002619	-	100	92.982	ENSTTRG00000011117	PRPF18	100	92.982	Tursiops_truncatus
ENSSPUG00000002619	-	91	94.855	ENSUAMG00000001815	-	93	94.855	Ursus_americanus
ENSSPUG00000002619	-	100	87.427	ENSUMAG00000012329	-	100	87.427	Ursus_maritimus
ENSSPUG00000002619	-	100	86.550	ENSVPAG00000011486	-	100	86.550	Vicugna_pacos
ENSSPUG00000002619	-	100	92.105	ENSVVUG00000005453	-	100	92.105	Vulpes_vulpes
ENSSPUG00000002619	-	100	80.290	ENSXETG00000024057	prpf18	100	80.290	Xenopus_tropicalis
ENSSPUG00000002619	-	100	82.267	ENSXCOG00000020414	prpf18	100	82.267	Xiphophorus_couchianus
ENSSPUG00000002619	-	100	82.749	ENSXMAG00000004713	prpf18	91	82.749	Xiphophorus_maculatus