EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSPUG00000002690 (Gene tree)
Gene ID
-
Gene Symbol
LSM5
Alias
YER146W
Full Name
LSM5 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type
protein_coding
Species
Sphenodon_punctatus
Status
putative
Strand
Minus strand
Length
10469 bases
Position
chrQEPC01000763.1:1405393-1415861
Accession
17162
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSPUP00000003534LSMPF01423.223.3e-1911
ENSSPUP00000003543LSMPF01423.221.8e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSPUT00000003754LSM5-201592-ENSSPUP0000000353491 (aa)--
ENSSPUT00000003763LSM5-202659-ENSSPUP0000000354362 (aa)--
Gene Model
Click here to download ENSSPUG00000002690's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000002690's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSPUG00000002690LSM58234.667ENSSPUG00000017047-7834.667
ENSSPUG00000002690LSM57631.507ENSSPUG00000000685SNRPE7731.507
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSPUG00000002690LSM510098.387ENSG00000106355LSM510098.387Homo_sapiens
ENSSPUG00000002690LSM510095.161ENSAPOG00000011743LSM510095.161Acanthochromis_polyacanthus
ENSSPUG00000002690LSM510095.161ENSAPOG00000020779LSM510093.407Acanthochromis_polyacanthus
ENSSPUG00000002690LSM510098.387ENSAMEG00000006700LSM510097.802Ailuropoda_melanoleuca
ENSSPUG00000002690LSM57393.333ENSACIG00000019185lsm58093.333Amphilophus_citrinellus
ENSSPUG00000002690LSM510095.161ENSAOCG00000001636lsm510093.407Amphiprion_ocellaris
ENSSPUG00000002690LSM510095.161ENSAPEG00000008201lsm510095.161Amphiprion_percula
ENSSPUG00000002690LSM510095.161ENSAPEG00000008151lsm510093.407Amphiprion_percula
ENSSPUG00000002690LSM59091.463ENSATEG00000020470lsm57693.333Anabas_testudineus
ENSSPUG00000002690LSM59798.333ENSAPLG00000008171LSM510098.649Anas_platyrhynchos
ENSSPUG00000002690LSM56296.429ENSACAG00000009530LSM59396.429Anolis_carolinensis
ENSSPUG00000002690LSM510093.548ENSANAG00000024192-9493.333Aotus_nancymaae
ENSSPUG00000002690LSM510098.387ENSANAG00000034409-10096.703Aotus_nancymaae
ENSSPUG00000002690LSM510088.710ENSANAG00000037758-10076.923Aotus_nancymaae
ENSSPUG00000002690LSM510095.161ENSACLG00000012891lsm59994.253Astatotilapia_calliptera
ENSSPUG00000002690LSM510081.915ENSAMXG00000035543lsm510081.915Astyanax_mexicanus
ENSSPUG00000002690LSM510098.387ENSBTAG00000002332LSM510097.802Bos_taurus
ENSSPUG00000002690LSM55377.083ENSBTAG00000052014-6377.083Bos_taurus
ENSSPUG00000002690LSM510077.419WBGene00003079lsm-510072.527Caenorhabditis_elegans
ENSSPUG00000002690LSM510098.387ENSCJAG00000047379LSM58188.462Callithrix_jacchus
ENSSPUG00000002690LSM510088.710ENSCJAG00000005678-10086.667Callithrix_jacchus
ENSSPUG00000002690LSM510096.774ENSCAFG00000019261-10096.703Canis_familiaris
ENSSPUG00000002690LSM55590.000ENSCAFG00000030781-5890.000Canis_familiaris
ENSSPUG00000002690LSM510098.387ENSCAFG00020004946LSM510097.802Canis_lupus_dingo
ENSSPUG00000002690LSM510098.387ENSCHIG00000024539LSM510097.802Capra_hircus
ENSSPUG00000002690LSM510095.604ENSCHIG00000004079-10095.604Capra_hircus
ENSSPUG00000002690LSM58172.973ENSCHIG00000021428-9570.455Capra_hircus
ENSSPUG00000002690LSM510087.097ENSTSYG00000026530-9179.121Carlito_syrichta
ENSSPUG00000002690LSM510098.387ENSTSYG00000006449-10097.802Carlito_syrichta
ENSSPUG00000002690LSM510084.615ENSTSYG00000028728-10084.615Carlito_syrichta
ENSSPUG00000002690LSM510072.527ENSTSYG00000036637-10072.527Carlito_syrichta
ENSSPUG00000002690LSM510088.710ENSCAPG00000006980LSM510090.667Cavia_aperea
ENSSPUG00000002690LSM510098.387ENSCPOG00000036386LSM510097.802Cavia_porcellus
ENSSPUG00000002690LSM510091.935ENSCCAG00000032792-10079.121Cebus_capucinus
ENSSPUG00000002690LSM510096.774ENSCCAG00000000821-10096.703Cebus_capucinus
ENSSPUG00000002690LSM59788.333ENSCCAG00000037334-10070.330Cebus_capucinus
ENSSPUG00000002690LSM510096.774ENSCCAG00000032123-10095.604Cebus_capucinus
ENSSPUG00000002690LSM510098.387ENSCCAG00000037808-10097.802Cebus_capucinus
ENSSPUG00000002690LSM59986.667ENSCATG00000014790-9594.545Cercocebus_atys
ENSSPUG00000002690LSM510098.387ENSCATG00000040218LSM510098.387Cercocebus_atys
ENSSPUG00000002690LSM510098.387ENSCLAG00000000202LSM510097.802Chinchilla_lanigera
ENSSPUG00000002690LSM510081.319ENSCLAG00000005062-9081.319Chinchilla_lanigera
ENSSPUG00000002690LSM58297.333ENSCHOG00000005335LSM59997.333Choloepus_hoffmanni
ENSSPUG00000002690LSM510098.387ENSCPBG00000013685LSM510097.802Chrysemys_picta_bellii
ENSSPUG00000002690LSM510088.710ENSCING00000020625-9787.209Ciona_intestinalis
ENSSPUG00000002690LSM510088.710ENSCSAVG00000001439-9887.209Ciona_savignyi
ENSSPUG00000002690LSM510098.387ENSCANG00000039909LSM510098.387Colobus_angolensis_palliatus
ENSSPUG00000002690LSM510098.387ENSCGRG00001015461Lsm510097.802Cricetulus_griseus_chok1gshd
ENSSPUG00000002690LSM510098.387ENSCGRG00000007677Lsm510098.667Cricetulus_griseus_crigri
ENSSPUG00000002690LSM57393.333ENSCSEG00000015286lsm57693.333Cynoglossus_semilaevis
ENSSPUG00000002690LSM510095.161ENSCVAG00000004262lsm510092.308Cyprinodon_variegatus
ENSSPUG00000002690LSM510095.161ENSDARG00000071573lsm510095.161Danio_rerio
ENSSPUG00000002690LSM59687.356ENSDNOG00000049495-9687.356Dasypus_novemcinctus
ENSSPUG00000002690LSM510098.387ENSDNOG00000034958LSM510097.802Dasypus_novemcinctus
ENSSPUG00000002690LSM510098.387ENSDORG00000009422Lsm510097.802Dipodomys_ordii
ENSSPUG00000002690LSM59883.607FBgn0035675CG66109581.395Drosophila_melanogaster
ENSSPUG00000002690LSM510072.581ENSETEG00000001469-9973.333Echinops_telfairi
ENSSPUG00000002690LSM510079.121ENSETEG00000010651-10079.121Echinops_telfairi
ENSSPUG00000002690LSM59866.292ENSETEG00000000777-9966.292Echinops_telfairi
ENSSPUG00000002690LSM510077.419ENSETEG00000016074-9879.730Echinops_telfairi
ENSSPUG00000002690LSM510098.387ENSETEG00000018068LSM510097.802Echinops_telfairi
ENSSPUG00000002690LSM510090.323ENSEBUG00000008540lsm510089.011Eptatretus_burgeri
ENSSPUG00000002690LSM510098.387ENSEASG00005003500LSM510097.802Equus_asinus_asinus
ENSSPUG00000002690LSM510083.516ENSECAG00000018445LSM510083.516Equus_caballus
ENSSPUG00000002690LSM59491.379ENSEEUG00000004102LSM59791.379Erinaceus_europaeus
ENSSPUG00000002690LSM510095.161ENSELUG00000007792lsm510092.308Esox_lucius
ENSSPUG00000002690LSM510098.387ENSFCAG00000000230LSM510097.802Felis_catus
ENSSPUG00000002690LSM510098.387ENSFALG00000001892LSM59298.684Ficedula_albicollis
ENSSPUG00000002690LSM510098.387ENSFDAG00000008767LSM510097.802Fukomys_damarensis
ENSSPUG00000002690LSM510069.355ENSFDAG00000008685-9767.073Fukomys_damarensis
ENSSPUG00000002690LSM510080.645ENSFHEG00000004011lsm58284.211Fundulus_heteroclitus
ENSSPUG00000002690LSM59895.082ENSGMOG00000018235lsm510092.222Gadus_morhua
ENSSPUG00000002690LSM510098.387ENSGALG00000041625LSM510096.703Gallus_gallus
ENSSPUG00000002690LSM510095.161ENSGAFG00000016824lsm510095.161Gambusia_affinis
ENSSPUG00000002690LSM510095.161ENSGACG00000005528lsm510093.407Gasterosteus_aculeatus
ENSSPUG00000002690LSM510098.387ENSGAGG00000015593LSM510097.802Gopherus_agassizii
ENSSPUG00000002690LSM510098.387ENSGGOG00000043469LSM510097.802Gorilla_gorilla
ENSSPUG00000002690LSM510095.161ENSHBUG00000013773lsm59994.253Haplochromis_burtoni
ENSSPUG00000002690LSM510098.387ENSHGLG00000011765LSM510097.802Heterocephalus_glaber_female
ENSSPUG00000002690LSM510098.387ENSHGLG00100015610LSM510094.505Heterocephalus_glaber_male
ENSSPUG00000002690LSM57391.111ENSHCOG00000008288lsm57691.111Hippocampus_comes
ENSSPUG00000002690LSM510095.161ENSIPUG00000021095LSM510091.209Ictalurus_punctatus
ENSSPUG00000002690LSM510098.387ENSSTOG00000012662LSM510097.802Ictidomys_tridecemlineatus
ENSSPUG00000002690LSM510085.484ENSSTOG00000033886-9781.395Ictidomys_tridecemlineatus
ENSSPUG00000002690LSM58791.139ENSJJAG00000004475-10091.139Jaculus_jaculus
ENSSPUG00000002690LSM510077.419ENSJJAG00000016144-9268.132Jaculus_jaculus
ENSSPUG00000002690LSM510098.387ENSJJAG00000012145-10097.802Jaculus_jaculus
ENSSPUG00000002690LSM510093.548ENSKMAG00000021861lsm510092.308Kryptolebias_marmoratus
ENSSPUG00000002690LSM56276.786ENSLBEG00000017379lsm59276.786Labrus_bergylta
ENSSPUG00000002690LSM510084.615ENSLBEG00000009235LSM57084.615Labrus_bergylta
ENSSPUG00000002690LSM510093.548ENSLACG00000022448LSM510093.407Latimeria_chalumnae
ENSSPUG00000002690LSM510095.161ENSLOCG00000012903lsm510092.308Lepisosteus_oculatus
ENSSPUG00000002690LSM510098.387ENSLAFG00000029579LSM510097.802Loxodonta_africana
ENSSPUG00000002690LSM59484.483ENSLAFG00000027938-10069.231Loxodonta_africana
ENSSPUG00000002690LSM510096.774ENSMFAG00000030152-10094.505Macaca_fascicularis
ENSSPUG00000002690LSM510098.387ENSMFAG00000038508LSM510097.802Macaca_fascicularis
ENSSPUG00000002690LSM55393.750ENSMFAG00000031187-8193.750Macaca_fascicularis
ENSSPUG00000002690LSM59987.778ENSMMUG00000039822-10087.778Macaca_mulatta
ENSSPUG00000002690LSM510096.774ENSMMUG00000030131-10094.505Macaca_mulatta
ENSSPUG00000002690LSM55788.462ENSMMUG00000045129-8188.462Macaca_mulatta
ENSSPUG00000002690LSM510098.387ENSMNEG00000015331LSM510098.387Macaca_nemestrina
ENSSPUG00000002690LSM510096.774ENSMNEG00000037935-10094.505Macaca_nemestrina
ENSSPUG00000002690LSM510098.387ENSMLEG00000024945LSM510097.802Mandrillus_leucophaeus
ENSSPUG00000002690LSM59886.517ENSMLEG00000034037-10086.517Mandrillus_leucophaeus
ENSSPUG00000002690LSM510090.323ENSMAMG00000012869lsm510089.011Mastacembelus_armatus
ENSSPUG00000002690LSM510095.161ENSMZEG00005019554lsm59994.253Maylandia_zebra
ENSSPUG00000002690LSM510098.387ENSMGAG00000012117LSM510096.703Meleagris_gallopavo
ENSSPUG00000002690LSM510098.387ENSMAUG00000012222Lsm510097.802Mesocricetus_auratus
ENSSPUG00000002690LSM510098.387ENSMAUG00000008132-10096.703Mesocricetus_auratus
ENSSPUG00000002690LSM59596.610ENSMICG00000033928-7796.610Microcebus_murinus
ENSSPUG00000002690LSM510098.387ENSMICG00000005353LSM510097.802Microcebus_murinus
ENSSPUG00000002690LSM510098.387ENSMOCG00000012018Lsm510097.802Microtus_ochrogaster
ENSSPUG00000002690LSM510095.161ENSMMOG00000004026lsm58796.053Mola_mola
ENSSPUG00000002690LSM510098.387ENSMODG00000013274-10098.387Monodelphis_domestica
ENSSPUG00000002690LSM510090.323ENSMALG00000010343lsm510090.323Monopterus_albus
ENSSPUG00000002690LSM510098.387MGP_CAROLIEiJ_G0028421Lsm510097.802Mus_caroli
ENSSPUG00000002690LSM510098.387ENSMUSG00000091625Lsm510097.802Mus_musculus
ENSSPUG00000002690LSM510098.387MGP_PahariEiJ_G0022171Lsm510097.802Mus_pahari
ENSSPUG00000002690LSM510098.387MGP_SPRETEiJ_G0029423Lsm510097.802Mus_spretus
ENSSPUG00000002690LSM510098.387ENSMLUG00000017028LSM510097.802Myotis_lucifugus
ENSSPUG00000002690LSM59976.667ENSNGAG00000022569-9676.667Nannospalax_galili
ENSSPUG00000002690LSM510098.387ENSNGAG00000024142Lsm510097.802Nannospalax_galili
ENSSPUG00000002690LSM510084.946ENSNGAG00000017707-10084.946Nannospalax_galili
ENSSPUG00000002690LSM59294.737ENSNBRG00000011386lsm57694.737Neolamprologus_brichardi
ENSSPUG00000002690LSM510098.387ENSNLEG00000015268LSM510097.802Nomascus_leucogenys
ENSSPUG00000002690LSM510098.387ENSOPRG00000002443LSM510098.667Ochotona_princeps
ENSSPUG00000002690LSM510098.387ENSODEG00000019072-10097.802Octodon_degus
ENSSPUG00000002690LSM510098.387ENSODEG00000008258-10097.802Octodon_degus
ENSSPUG00000002690LSM59456.897ENSOANG00000014540-10060.000Ornithorhynchus_anatinus
ENSSPUG00000002690LSM510098.387ENSOCUG00000029043LSM510097.802Oryctolagus_cuniculus
ENSSPUG00000002690LSM510093.548ENSORLG00000027725lsm55891.209Oryzias_latipes
ENSSPUG00000002690LSM510093.548ENSORLG00020003019lsm58688.506Oryzias_latipes_hni
ENSSPUG00000002690LSM510093.548ENSORLG00015003338lsm510091.209Oryzias_latipes_hsok
ENSSPUG00000002690LSM510093.548ENSOMEG00000001078lsm510090.110Oryzias_melastigma
ENSSPUG00000002690LSM510098.387ENSOGAG00000013892LSM510097.802Otolemur_garnettii
ENSSPUG00000002690LSM510098.387ENSOARG00000006944LSM510097.802Ovis_aries
ENSSPUG00000002690LSM510098.387ENSPPAG00000003697-10097.802Pan_paniscus
ENSSPUG00000002690LSM510098.387ENSPPRG00000002550LSM510097.802Panthera_pardus
ENSSPUG00000002690LSM510098.387ENSPTIG00000015604LSM510097.802Panthera_tigris_altaica
ENSSPUG00000002690LSM510098.387ENSPTRG00000019057LSM510097.802Pan_troglodytes
ENSSPUG00000002690LSM510081.319ENSPTRG00000049488-10083.516Pan_troglodytes
ENSSPUG00000002690LSM510098.387ENSPANG00000032179-10097.802Papio_anubis
ENSSPUG00000002690LSM59987.778ENSPANG00000032538-10087.778Papio_anubis
ENSSPUG00000002690LSM510096.774ENSPANG00000033477-10093.407Papio_anubis
ENSSPUG00000002690LSM510095.161ENSPKIG00000011910lsm510092.308Paramormyrops_kingsleyae
ENSSPUG00000002690LSM59798.333ENSPSIG00000014796LSM510098.649Pelodiscus_sinensis
ENSSPUG00000002690LSM510095.161ENSPMGG00000011699lsm510095.161Periophthalmus_magnuspinnatus
ENSSPUG00000002690LSM55295.745ENSPEMG00000019994-8095.745Peromyscus_maniculatus_bairdii
ENSSPUG00000002690LSM510072.581ENSPEMG00000022375-10070.330Peromyscus_maniculatus_bairdii
ENSSPUG00000002690LSM510095.161ENSPFOG00000001433lsm510092.308Poecilia_formosa
ENSSPUG00000002690LSM510095.161ENSPLAG00000009665lsm510092.308Poecilia_latipinna
ENSSPUG00000002690LSM510095.161ENSPMEG00000022265lsm510092.308Poecilia_mexicana
ENSSPUG00000002690LSM510095.161ENSPREG00000022452lsm510095.161Poecilia_reticulata
ENSSPUG00000002690LSM510094.505ENSPPYG00000017661LSM510094.505Pongo_abelii
ENSSPUG00000002690LSM58997.531ENSPCAG00000013740LSM510097.531Procavia_capensis
ENSSPUG00000002690LSM510098.387ENSPVAG00000009786LSM510097.802Pteropus_vampyrus
ENSSPUG00000002690LSM510095.161ENSPNYG00000022236lsm59994.253Pundamilia_nyererei
ENSSPUG00000002690LSM510095.161ENSPNAG00000001887lsm510091.209Pygocentrus_nattereri
ENSSPUG00000002690LSM510098.387ENSRNOG00000042126Lsm510097.802Rattus_norvegicus
ENSSPUG00000002690LSM510096.825ENSRNOG00000027305AABR07065089.110093.478Rattus_norvegicus
ENSSPUG00000002690LSM510096.774ENSRBIG00000024431-10096.703Rhinopithecus_bieti
ENSSPUG00000002690LSM510098.387ENSRBIG00000030340-10097.802Rhinopithecus_bieti
ENSSPUG00000002690LSM510098.387ENSRBIG00000030714-10097.802Rhinopithecus_bieti
ENSSPUG00000002690LSM510098.387ENSRBIG00000027803-10098.387Rhinopithecus_bieti
ENSSPUG00000002690LSM510098.387ENSRROG00000004655-10097.802Rhinopithecus_roxellana
ENSSPUG00000002690LSM510098.387ENSRROG00000023884-10097.802Rhinopithecus_roxellana
ENSSPUG00000002690LSM510098.387ENSRROG00000042782-10098.387Rhinopithecus_roxellana
ENSSPUG00000002690LSM59450.794YER146W-8850.000Saccharomyces_cerevisiae
ENSSPUG00000002690LSM510098.387ENSSBOG00000012312LSM510097.802Saimiri_boliviensis_boliviensis
ENSSPUG00000002690LSM510087.097ENSSBOG00000034794-10075.824Saimiri_boliviensis_boliviensis
ENSSPUG00000002690LSM510096.774ENSSBOG00000019124-10095.604Saimiri_boliviensis_boliviensis
ENSSPUG00000002690LSM510095.161ENSSFOG00015010099lsm510092.308Scleropages_formosus
ENSSPUG00000002690LSM57393.333ENSSMAG00000007895lsm57693.333Scophthalmus_maximus
ENSSPUG00000002690LSM510095.161ENSSDUG00000010762lsm510095.161Seriola_dumerili
ENSSPUG00000002690LSM510095.161ENSSLDG00000025242lsm510092.308Seriola_lalandi_dorsalis
ENSSPUG00000002690LSM59475.862ENSSLDG00000008014-9376.923Seriola_lalandi_dorsalis
ENSSPUG00000002690LSM510069.231ENSSARG00000003330LSM510069.231Sorex_araneus
ENSSPUG00000002690LSM57393.333ENSSPAG00000005435lsm57693.333Stegastes_partitus
ENSSPUG00000002690LSM57685.507ENSSSCG00000029661-9685.507Sus_scrofa
ENSSPUG00000002690LSM510098.387ENSSSCG00000026064-10097.802Sus_scrofa
ENSSPUG00000002690LSM510098.387ENSTGUG00000017539LSM510094.505Taeniopygia_guttata
ENSSPUG00000002690LSM58686.747ENSTRUG00000017749lsm56486.747Takifugu_rubripes
ENSSPUG00000002690LSM510093.548ENSTNIG00000008695lsm59994.253Tetraodon_nigroviridis
ENSSPUG00000002690LSM510098.387ENSTBEG00000004876LSM510097.802Tupaia_belangeri
ENSSPUG00000002690LSM510098.387ENSTTRG00000004237LSM510097.802Tursiops_truncatus
ENSSPUG00000002690LSM55788.462ENSUAMG00000009786LSM56888.462Ursus_americanus
ENSSPUG00000002690LSM510096.703ENSUMAG00000002625LSM56596.703Ursus_maritimus
ENSSPUG00000002690LSM510098.387ENSVPAG00000009985LSM510097.802Vicugna_pacos
ENSSPUG00000002690LSM510098.387ENSVVUG00000021311LSM510097.802Vulpes_vulpes
ENSSPUG00000002690LSM59092.683ENSXETG00000026465lsm510092.683Xenopus_tropicalis
ENSSPUG00000002690LSM510095.161ENSXCOG00000015348lsm510095.161Xiphophorus_couchianus
ENSSPUG00000002690LSM510095.161ENSXMAG00000029988lsm510092.308Xiphophorus_maculatus

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