EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000002834 (Gene tree)
Gene ID: -
Gene Symbol: RRP1B
Alias: KIAA0179|Nnp1|PPP1R136|RRP1
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 34263 bases
Position: chrQEPC01005054.1:9750-44012
Accession: 23818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000003736	Nop52	PF05997.12	2.1e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000003972	RRP1B-201	2280	-	ENSSPUP00000003736	759 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000002834's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000002834's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000002834	RRP1B	100	46.500	ENSG00000160208	RRP1B	100	46.144	Homo_sapiens
ENSSPUG00000002834	RRP1B	62	47.922	ENSAPOG00000007490	-	51	48.864	Acanthochromis_polyacanthus
ENSSPUG00000002834	RRP1B	50	51.000	ENSAMEG00000011448	RRP1	86	49.633	Ailuropoda_melanoleuca
ENSSPUG00000002834	RRP1B	68	52.956	ENSAMEG00000011401	RRP1B	65	54.790	Ailuropoda_melanoleuca
ENSSPUG00000002834	RRP1B	56	50.000	ENSAOCG00000017894	-	98	52.809	Amphiprion_ocellaris
ENSSPUG00000002834	RRP1B	64	47.482	ENSATEG00000005045	-	50	48.656	Anabas_testudineus
ENSSPUG00000002834	RRP1B	94	56.361	ENSAPLG00000004310	RRP1B	100	56.772	Anas_platyrhynchos
ENSSPUG00000002834	RRP1B	99	52.151	ENSACAG00000017851	RRP1B	95	53.618	Anolis_carolinensis
ENSSPUG00000002834	RRP1B	100	44.962	ENSANAG00000034889	RRP1B	50	54.061	Aotus_nancymaae
ENSSPUG00000002834	RRP1B	100	45.214	ENSCJAG00000017077	RRP1B	100	44.949	Callithrix_jacchus
ENSSPUG00000002834	RRP1B	94	42.183	ENSCAFG00000010621	RRP1B	99	42.318	Canis_familiaris
ENSSPUG00000002834	RRP1B	52	49.272	ENSCAFG00000010646	RRP1	81	49.118	Canis_familiaris
ENSSPUG00000002834	RRP1B	52	49.272	ENSCAFG00020018979	RRP1	76	53.371	Canis_lupus_dingo
ENSSPUG00000002834	RRP1B	100	43.456	ENSCAFG00020018901	RRP1B	100	43.253	Canis_lupus_dingo
ENSSPUG00000002834	RRP1B	50	48.492	ENSCHIG00000020948	RRP1	75	54.571	Capra_hircus
ENSSPUG00000002834	RRP1B	100	41.740	ENSCPOG00000002396	RRP1B	100	42.474	Cavia_porcellus
ENSSPUG00000002834	RRP1B	100	46.289	ENSCCAG00000029384	RRP1B	100	44.806	Cebus_capucinus
ENSSPUG00000002834	RRP1B	54	50.117	ENSCCAG00000029828	RRP1	73	56.196	Cebus_capucinus
ENSSPUG00000002834	RRP1B	100	46.500	ENSCATG00000017423	RRP1B	100	46.269	Cercocebus_atys
ENSSPUG00000002834	RRP1B	53	49.048	ENSCLAG00000011639	RRP1	76	52.841	Chinchilla_lanigera
ENSSPUG00000002834	RRP1B	100	46.125	ENSCSAG00000007961	RRP1B	100	45.896	Chlorocebus_sabaeus
ENSSPUG00000002834	RRP1B	51	39.588	ENSCHOG00000002426	-	53	43.454	Choloepus_hoffmanni
ENSSPUG00000002834	RRP1B	99	64.062	ENSCPBG00000010310	RRP1B	98	63.064	Chrysemys_picta_bellii
ENSSPUG00000002834	RRP1B	59	31.579	ENSCING00000003304	-	70	33.535	Ciona_intestinalis
ENSSPUG00000002834	RRP1B	100	46.000	ENSCANG00000040952	RRP1B	100	45.533	Colobus_angolensis_palliatus
ENSSPUG00000002834	RRP1B	100	43.899	ENSCGRG00001023882	-	100	43.648	Cricetulus_griseus_chok1gshd
ENSSPUG00000002834	RRP1B	100	44.125	ENSCGRG00001010889	-	100	43.875	Cricetulus_griseus_chok1gshd
ENSSPUG00000002834	RRP1B	97	42.401	ENSCGRG00000001553	Rrp1b	97	42.801	Cricetulus_griseus_crigri
ENSSPUG00000002834	RRP1B	66	51.685	ENSCSEG00000020711	-	74	51.685	Cynoglossus_semilaevis
ENSSPUG00000002834	RRP1B	52	50.611	ENSDNOG00000019880	RRP1	83	50.126	Dasypus_novemcinctus
ENSSPUG00000002834	RRP1B	93	39.011	ENSDORG00000005496	Rrp1b	100	39.724	Dipodomys_ordii
ENSSPUG00000002834	RRP1B	100	40.909	ENSETEG00000019489	RRP1B	64	67.500	Echinops_telfairi
ENSSPUG00000002834	RRP1B	53	46.318	ENSEASG00005001673	RRP1	87	50.374	Equus_asinus_asinus
ENSSPUG00000002834	RRP1B	100	45.489	ENSEASG00005001687	RRP1B	50	53.807	Equus_asinus_asinus
ENSSPUG00000002834	RRP1B	100	45.019	ENSECAG00000018018	RRP1B	50	53.807	Equus_caballus
ENSSPUG00000002834	RRP1B	53	48.219	ENSECAG00000015703	RRP1	87	50.370	Equus_caballus
ENSSPUG00000002834	RRP1B	63	58.197	ENSELUG00000015885	-	87	51.077	Esox_lucius
ENSSPUG00000002834	RRP1B	50	52.296	ENSFCAG00000008434	RRP1	84	52.296	Felis_catus
ENSSPUG00000002834	RRP1B	92	55.556	ENSFALG00000002024	RRP1B	100	55.274	Ficedula_albicollis
ENSSPUG00000002834	RRP1B	95	38.522	ENSFDAG00000010899	RRP1B	76	45.538	Fukomys_damarensis
ENSSPUG00000002834	RRP1B	52	51.100	ENSFDAG00000013728	RRP1	87	51.100	Fukomys_damarensis
ENSSPUG00000002834	RRP1B	63	48.387	ENSFHEG00000016314	-	54	47.664	Fundulus_heteroclitus
ENSSPUG00000002834	RRP1B	64	45.879	ENSGMOG00000001953	-	70	45.000	Gadus_morhua
ENSSPUG00000002834	RRP1B	100	57.623	ENSGALG00000035696	RRP1B	100	58.010	Gallus_gallus
ENSSPUG00000002834	RRP1B	69	46.113	ENSGACG00000001438	rrp1	74	47.592	Gasterosteus_aculeatus
ENSSPUG00000002834	RRP1B	100	63.496	ENSGAGG00000000375	RRP1B	100	63.368	Gopherus_agassizii
ENSSPUG00000002834	RRP1B	100	46.500	ENSGGOG00000012069	RRP1B	100	46.144	Gorilla_gorilla
ENSSPUG00000002834	RRP1B	73	43.697	ENSHGLG00100002232	RRP1B	66	47.015	Heterocephalus_glaber_male
ENSSPUG00000002834	RRP1B	69	43.341	ENSHCOG00000018388	-	59	44.330	Hippocampus_comes
ENSSPUG00000002834	RRP1B	61	46.721	ENSIPUG00000000673	-	68	46.594	Ictalurus_punctatus
ENSSPUG00000002834	RRP1B	99	43.590	ENSSTOG00000011790	RRP1B	96	43.678	Ictidomys_tridecemlineatus
ENSSPUG00000002834	RRP1B	60	46.518	ENSKMAG00000005539	rrp1	71	47.354	Kryptolebias_marmoratus
ENSSPUG00000002834	RRP1B	88	39.800	ENSLAFG00000000766	RRP1B	83	54.875	Loxodonta_africana
ENSSPUG00000002834	RRP1B	100	46.020	ENSMFAG00000039152	RRP1B	100	45.983	Macaca_fascicularis
ENSSPUG00000002834	RRP1B	100	44.819	ENSMMUG00000000104	RRP1B	100	44.789	Macaca_mulatta
ENSSPUG00000002834	RRP1B	100	46.202	ENSMNEG00000034269	RRP1B	100	46.163	Macaca_nemestrina
ENSSPUG00000002834	RRP1B	94	44.987	ENSMLEG00000040044	RRP1B	99	45.106	Mandrillus_leucophaeus
ENSSPUG00000002834	RRP1B	100	57.050	ENSMGAG00000014591	RRP1B	100	57.439	Meleagris_gallopavo
ENSSPUG00000002834	RRP1B	100	42.273	ENSMAUG00000021508	Rrp1b	100	42.288	Mesocricetus_auratus
ENSSPUG00000002834	RRP1B	54	48.268	ENSMICG00000004700	RRP1	85	51.151	Microcebus_murinus
ENSSPUG00000002834	RRP1B	100	45.812	ENSMICG00000004686	RRP1B	81	58.876	Microcebus_murinus
ENSSPUG00000002834	RRP1B	100	42.018	ENSMOCG00000001117	Rrp1b	100	42.092	Microtus_ochrogaster
ENSSPUG00000002834	RRP1B	100	51.317	ENSMODG00000021033	RRP1B	100	51.500	Monodelphis_domestica
ENSSPUG00000002834	RRP1B	99	41.454	MGP_CAROLIEiJ_G0021376	Rrp1b	99	40.461	Mus_caroli
ENSSPUG00000002834	RRP1B	100	41.176	MGP_PahariEiJ_G0023695	Rrp1b	60	69.863	Mus_pahari
ENSSPUG00000002834	RRP1B	99	42.254	MGP_SPRETEiJ_G0022290	Rrp1b	59	71.429	Mus_spretus
ENSSPUG00000002834	RRP1B	99	45.489	ENSMLUG00000007738	RRP1B	99	45.420	Myotis_lucifugus
ENSSPUG00000002834	RRP1B	99	42.288	ENSNGAG00000021073	Rrp1b	50	50.259	Nannospalax_galili
ENSSPUG00000002834	RRP1B	73	80.165	ENSMEUG00000003226	-	86	80.165	Notamacropus_eugenii
ENSSPUG00000002834	RRP1B	61	46.715	ENSONIG00000004264	rrp1	60	46.715	Oreochromis_niloticus
ENSSPUG00000002834	RRP1B	99	45.244	ENSOANG00000006470	RRP1B	99	44.654	Ornithorhynchus_anatinus
ENSSPUG00000002834	RRP1B	74	48.805	ENSOCUG00000025931	RRP1B	63	54.730	Oryctolagus_cuniculus
ENSSPUG00000002834	RRP1B	69	46.348	ENSORLG00020007199	-	57	47.472	Oryzias_latipes_hni
ENSSPUG00000002834	RRP1B	69	45.592	ENSORLG00015004425	-	57	47.191	Oryzias_latipes_hsok
ENSSPUG00000002834	RRP1B	61	55.285	ENSOGAG00000009872	RRP1B	69	57.143	Otolemur_garnettii
ENSSPUG00000002834	RRP1B	94	45.298	ENSPPAG00000035319	RRP1B	99	44.855	Pan_paniscus
ENSSPUG00000002834	RRP1B	50	52.041	ENSPPRG00000010656	RRP1	75	56.342	Panthera_pardus
ENSSPUG00000002834	RRP1B	60	54.286	ENSPTIG00000016894	RRP1B	71	54.286	Panthera_tigris_altaica
ENSSPUG00000002834	RRP1B	100	46.625	ENSPTRG00000013958	RRP1B	100	46.269	Pan_troglodytes
ENSSPUG00000002834	RRP1B	100	45.953	ENSPANG00000011090	RRP1B	100	46.287	Papio_anubis
ENSSPUG00000002834	RRP1B	52	49.756	ENSPANG00000015097	RRP1	73	54.624	Papio_anubis
ENSSPUG00000002834	RRP1B	99	64.062	ENSPSIG00000008152	RRP1B	96	64.139	Pelodiscus_sinensis
ENSSPUG00000002834	RRP1B	100	42.675	ENSPEMG00000022490	Rrp1b	100	42.327	Peromyscus_maniculatus_bairdii
ENSSPUG00000002834	RRP1B	54	50.000	ENSPCIG00000015523	-	75	54.701	Phascolarctos_cinereus
ENSSPUG00000002834	RRP1B	100	50.379	ENSPCIG00000015513	RRP1B	100	51.192	Phascolarctos_cinereus
ENSSPUG00000002834	RRP1B	61	42.801	ENSPLAG00000016684	-	50	49.859	Poecilia_latipinna
ENSSPUG00000002834	RRP1B	99	36.671	ENSPREG00000015673	-	57	49.577	Poecilia_reticulata
ENSSPUG00000002834	RRP1B	100	46.625	ENSPPYG00000011470	RRP1B	100	46.020	Pongo_abelii
ENSSPUG00000002834	RRP1B	86	54.315	ENSPCOG00000017927	RRP1B	52	54.822	Propithecus_coquereli
ENSSPUG00000002834	RRP1B	73	52.604	ENSPVAG00000001436	RRP1B	74	55.738	Pteropus_vampyrus
ENSSPUG00000002834	RRP1B	100	42.474	ENSRNOG00000001194	Rrp1b	100	42.416	Rattus_norvegicus
ENSSPUG00000002834	RRP1B	100	44.125	ENSRBIG00000041689	RRP1B	100	44.125	Rhinopithecus_bieti
ENSSPUG00000002834	RRP1B	100	46.250	ENSRROG00000031499	RRP1B	100	46.250	Rhinopithecus_roxellana
ENSSPUG00000002834	RRP1B	52	51.493	ENSSBOG00000034689	RRP1	74	55.030	Saimiri_boliviensis_boliviensis
ENSSPUG00000002834	RRP1B	94	41.816	ENSSBOG00000034727	RRP1B	99	42.214	Saimiri_boliviensis_boliviensis
ENSSPUG00000002834	RRP1B	100	50.873	ENSSHAG00000017789	RRP1B	100	51.496	Sarcophilus_harrisii
ENSSPUG00000002834	RRP1B	67	47.727	ENSSMAG00000016847	-	84	48.857	Scophthalmus_maximus
ENSSPUG00000002834	RRP1B	64	48.737	ENSSDUG00000000551	-	53	49.862	Seriola_dumerili
ENSSPUG00000002834	RRP1B	64	48.737	ENSSLDG00000002538	-	53	49.862	Seriola_lalandi_dorsalis
ENSSPUG00000002834	RRP1B	55	51.079	ENSSARG00000003108	-	62	52.518	Sorex_araneus
ENSSPUG00000002834	RRP1B	63	49.275	ENSSPAG00000005370	-	52	48.611	Stegastes_partitus
ENSSPUG00000002834	RRP1B	84	49.873	ENSSSCG00000021698	RRP1B	64	53.271	Sus_scrofa
ENSSPUG00000002834	RRP1B	94	55.464	ENSTGUG00000005926	RRP1B	100	55.830	Taeniopygia_guttata
ENSSPUG00000002834	RRP1B	58	50.716	ENSTNIG00000005053	rrp1	69	50.000	Tetraodon_nigroviridis
ENSSPUG00000002834	RRP1B	67	51.149	ENSTBEG00000000422	RRP1B	80	54.983	Tupaia_belangeri
ENSSPUG00000002834	RRP1B	60	56.923	ENSUMAG00000025510	RRP1B	81	55.147	Ursus_maritimus
ENSSPUG00000002834	RRP1B	94	42.704	ENSVVUG00000024509	RRP1B	99	42.084	Vulpes_vulpes
ENSSPUG00000002834	RRP1B	68	46.602	ENSXETG00000013683	rrp1b	83	46.602	Xenopus_tropicalis