EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSPUG00000003204 (Gene tree)
Gene ID
-
Gene Symbol
PABPC4
Alias
APP-1|iPABP
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Sphenodon_punctatus
Status
putative
Strand
Minus strand
Length
23704 bases
Position
chrQEPC01013809.1:100034-123737
Accession
8557
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSPUP00000004214PABPPF00658.183.8e-3211
ENSSPUP00000004210PABPPF00658.184.1e-3211
ENSSPUP00000004214RRM_5PF13893.61.5e-0912
ENSSPUP00000004214RRM_5PF13893.61.5e-0922
ENSSPUP00000004210RRM_5PF13893.61.7e-0912
ENSSPUP00000004210RRM_5PF13893.61.7e-0922
ENSSPUP00000004214RRM_1PF00076.222.1e-9214
ENSSPUP00000004214RRM_1PF00076.222.1e-9224
ENSSPUP00000004214RRM_1PF00076.222.1e-9234
ENSSPUP00000004214RRM_1PF00076.222.1e-9244
ENSSPUP00000004210RRM_1PF00076.222.4e-9214
ENSSPUP00000004210RRM_1PF00076.222.4e-9224
ENSSPUP00000004210RRM_1PF00076.222.4e-9234
ENSSPUP00000004210RRM_1PF00076.222.4e-9244
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSPUT00000004478PABPC4-2021875-ENSSPUP00000004214624 (aa)--
ENSSPUT00000004473PABPC4-2011929-ENSSPUP00000004210642 (aa)--
Gene Model
Click here to download ENSSPUG00000003204's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000003204's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSPUG00000003204PABPC49979.459ENSSPUG00000018267PABPC19879.107
ENSSPUG00000003204PABPC45830.370ENSSPUG00000008547TIA17330.370
ENSSPUG00000003204PABPC45936.145ENSSPUG00000001246ELAVL28936.145
ENSSPUG00000003204PABPC45630.405ENSSPUG00000002412TIAL18830.405
ENSSPUG00000003204PABPC46034.940ENSSPUG00000011636ELAVL49134.940
ENSSPUG00000003204PABPC47463.588ENSSPUG00000018259-9763.852
ENSSPUG00000003204PABPC45339.535ENSSPUG00000004228CELF16338.636
ENSSPUG00000003204PABPC49969.291ENSSPUG00000004233PABPC1L9968.487
ENSSPUG00000003204PABPC45833.553ENSSPUG00000002077ELAVL19533.553
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSPUG00000003204PABPC410090.385ENSG00000090621PABPC410097.674Homo_sapiens
ENSSPUG00000003204PABPC49986.838ENSAPOG00000001161pabpc49986.804Acanthochromis_polyacanthus
ENSSPUG00000003204PABPC49953.084ENSAMEG00000015083-9952.597Ailuropoda_melanoleuca
ENSSPUG00000003204PABPC410087.253ENSAMEG00000011535-9987.405Ailuropoda_melanoleuca
ENSSPUG00000003204PABPC410086.804ENSACIG00000023343pabpc49987.440Amphilophus_citrinellus
ENSSPUG00000003204PABPC49986.998ENSAOCG00000021529pabpc49986.963Amphiprion_ocellaris
ENSSPUG00000003204PABPC49986.998ENSAPEG00000019196pabpc49986.963Amphiprion_percula
ENSSPUG00000003204PABPC49986.859ENSATEG00000007402pabpc49986.984Anabas_testudineus
ENSSPUG00000003204PABPC410095.873ENSAPLG00000009729-10095.873Anas_platyrhynchos
ENSSPUG00000003204PABPC49993.023ENSACAG00000002544PABPC410093.023Anolis_carolinensis
ENSSPUG00000003204PABPC410090.000ENSANAG00000025079PABPC49990.000Aotus_nancymaae
ENSSPUG00000003204PABPC410086.486ENSACLG00000019558pabpc49987.122Astatotilapia_calliptera
ENSSPUG00000003204PABPC410080.824ENSAMXG00000018779pabpc49981.458Astyanax_mexicanus
ENSSPUG00000003204PABPC410087.500ENSBTAG00000017125PABPC49987.733Bos_taurus
ENSSPUG00000003204PABPC45884.431ENSBTAG00000048536-9384.431Bos_taurus
ENSSPUG00000003204PABPC47781.818ENSCJAG00000045953-9779.528Callithrix_jacchus
ENSSPUG00000003204PABPC410089.841ENSCJAG00000002512-9989.841Callithrix_jacchus
ENSSPUG00000003204PABPC410090.159ENSCAFG00000003081PABPC49990.159Canis_familiaris
ENSSPUG00000003204PABPC410087.405ENSCAFG00020004161PABPC49987.557Canis_lupus_dingo
ENSSPUG00000003204PABPC410087.253ENSCHIG00000019398-9987.405Capra_hircus
ENSSPUG00000003204PABPC410071.272ENSCHIG00000023385-9971.272Capra_hircus
ENSSPUG00000003204PABPC410090.000ENSTSYG00000006532PABPC49990.000Carlito_syrichta
ENSSPUG00000003204PABPC49989.793ENSCAPG00000015984PABPC49989.793Cavia_aperea
ENSSPUG00000003204PABPC410090.000ENSCPOG00000009552PABPC49990.000Cavia_porcellus
ENSSPUG00000003204PABPC410089.841ENSCCAG00000037306PABPC49989.841Cebus_capucinus
ENSSPUG00000003204PABPC410090.000ENSCATG00000042164PABPC49990.000Cercocebus_atys
ENSSPUG00000003204PABPC410090.000ENSCLAG00000011899PABPC49990.000Chinchilla_lanigera
ENSSPUG00000003204PABPC410087.253ENSCSAG00000001135PABPC49987.405Chlorocebus_sabaeus
ENSSPUG00000003204PABPC48791.029ENSCHOG00000005327PABPC48191.029Choloepus_hoffmanni
ENSSPUG00000003204PABPC410096.508ENSCPBG00000001038PABPC410096.508Chrysemys_picta_bellii
ENSSPUG00000003204PABPC49989.855ENSCANG00000034177PABPC49989.855Colobus_angolensis_palliatus
ENSSPUG00000003204PABPC49989.935ENSCGRG00001018166Pabpc410088.553Cricetulus_griseus_chok1gshd
ENSSPUG00000003204PABPC49889.951ENSCGRG00000009777Pabpc410088.548Cricetulus_griseus_crigri
ENSSPUG00000003204PABPC49986.306ENSCSEG00000000130pabpc49986.943Cynoglossus_semilaevis
ENSSPUG00000003204PABPC49986.774ENSCVAG00000019246pabpc49987.419Cyprinodon_variegatus
ENSSPUG00000003204PABPC49987.122ENSDARG00000059259pabpc410087.624Danio_rerio
ENSSPUG00000003204PABPC49989.088ENSDNOG00000018444-9989.088Dasypus_novemcinctus
ENSSPUG00000003204PABPC410087.944ENSDORG00000011581Pabpc49988.025Dipodomys_ordii
ENSSPUG00000003204PABPC410096.875ENSETEG00000018453-8496.875Echinops_telfairi
ENSSPUG00000003204PABPC48758.425ENSETEG00000009172-9958.425Echinops_telfairi
ENSSPUG00000003204PABPC49977.974ENSEBUG00000000992pabpc49977.331Eptatretus_burgeri
ENSSPUG00000003204PABPC49778.211ENSEBUG00000013782pabpc49977.671Eptatretus_burgeri
ENSSPUG00000003204PABPC410087.253ENSEASG00005014119PABPC49987.405Equus_asinus_asinus
ENSSPUG00000003204PABPC410087.253ENSECAG00000009396PABPC49987.405Equus_caballus
ENSSPUG00000003204PABPC49885.471ENSEEUG00000002962PABPC49985.281Erinaceus_europaeus
ENSSPUG00000003204PABPC49986.010ENSELUG00000003195pabpc49986.435Esox_lucius
ENSSPUG00000003204PABPC410090.159ENSFCAG00000015254-9990.159Felis_catus
ENSSPUG00000003204PABPC410095.231ENSFALG00000000543PABPC410095.231Ficedula_albicollis
ENSSPUG00000003204PABPC410086.039ENSFDAG00000020016-9987.102Fukomys_damarensis
ENSSPUG00000003204PABPC49057.783ENSFDAG00000010581-10054.844Fukomys_damarensis
ENSSPUG00000003204PABPC410086.486ENSFHEG00000007548pabpc49987.122Fundulus_heteroclitus
ENSSPUG00000003204PABPC410084.119ENSGMOG00000019025pabpc49984.748Gadus_morhua
ENSSPUG00000003204PABPC410096.032ENSGALG00000003800PABPC410096.032Gallus_gallus
ENSSPUG00000003204PABPC49993.160ENSGAFG00000018195pabpc49896.667Gambusia_affinis
ENSSPUG00000003204PABPC49985.032ENSGACG00000007179pabpc49985.669Gasterosteus_aculeatus
ENSSPUG00000003204PABPC410096.190ENSGAGG00000001888PABPC410096.190Gopherus_agassizii
ENSSPUG00000003204PABPC410090.000ENSGGOG00000004002PABPC49990.000Gorilla_gorilla
ENSSPUG00000003204PABPC410086.328ENSHBUG00000020206pabpc49986.963Haplochromis_burtoni
ENSSPUG00000003204PABPC410089.841ENSHGLG00000011162PABPC49989.841Heterocephalus_glaber_female
ENSSPUG00000003204PABPC410089.841ENSHGLG00100001580PABPC49989.841Heterocephalus_glaber_male
ENSSPUG00000003204PABPC49986.124ENSHCOG00000012694pabpc49986.762Hippocampus_comes
ENSSPUG00000003204PABPC49885.668ENSIPUG00000016620pabpc49985.624Ictalurus_punctatus
ENSSPUG00000003204PABPC410090.224ENSSTOG00000010416PABPC49990.224Ictidomys_tridecemlineatus
ENSSPUG00000003204PABPC410086.090ENSJJAG00000007781Pabpc49986.003Jaculus_jaculus
ENSSPUG00000003204PABPC410086.190ENSKMAG00000013597pabpc49986.825Kryptolebias_marmoratus
ENSSPUG00000003204PABPC410085.895ENSLBEG00000013654pabpc49985.895Labrus_bergylta
ENSSPUG00000003204PABPC410092.114ENSLACG00000011907PABPC410091.956Latimeria_chalumnae
ENSSPUG00000003204PABPC410088.365ENSLOCG00000001877pabpc410089.151Lepisosteus_oculatus
ENSSPUG00000003204PABPC410090.705ENSLAFG00000000151PABPC49990.705Loxodonta_africana
ENSSPUG00000003204PABPC410090.000ENSMFAG00000041481PABPC49990.000Macaca_fascicularis
ENSSPUG00000003204PABPC410087.253ENSMMUG00000007497PABPC49987.405Macaca_mulatta
ENSSPUG00000003204PABPC410089.841ENSMNEG00000043054PABPC49989.841Macaca_nemestrina
ENSSPUG00000003204PABPC410090.000ENSMLEG00000040716PABPC49990.000Mandrillus_leucophaeus
ENSSPUG00000003204PABPC49986.677ENSMAMG00000010025pabpc49986.963Mastacembelus_armatus
ENSSPUG00000003204PABPC410086.328ENSMZEG00005006141pabpc49986.963Maylandia_zebra
ENSSPUG00000003204PABPC49993.526ENSMGAG00000005408PABPC410093.526Meleagris_gallopavo
ENSSPUG00000003204PABPC47384.135ENSMAUG00000001295-9784.135Mesocricetus_auratus
ENSSPUG00000003204PABPC49976.074ENSMAUG00000019763-8489.908Mesocricetus_auratus
ENSSPUG00000003204PABPC45882.036ENSMAUG00000004089-9280.117Mesocricetus_auratus
ENSSPUG00000003204PABPC48989.748ENSMICG00000016633-10089.928Microcebus_murinus
ENSSPUG00000003204PABPC49978.237ENSMICG00000036729-9978.058Microcebus_murinus
ENSSPUG00000003204PABPC49990.080ENSMOCG00000006763Pabpc49989.524Microtus_ochrogaster
ENSSPUG00000003204PABPC410083.892ENSMMOG00000002363pabpc49985.191Mola_mola
ENSSPUG00000003204PABPC46073.867ENSMODG00000018051-9673.867Monodelphis_domestica
ENSSPUG00000003204PABPC410090.244ENSMODG00000017657-10090.396Monodelphis_domestica
ENSSPUG00000003204PABPC49986.400ENSMALG00000011017pabpc49986.371Monopterus_albus
ENSSPUG00000003204PABPC49976.450MGP_CAROLIEiJ_G0024864-9976.450Mus_caroli
ENSSPUG00000003204PABPC410084.977MGP_CAROLIEiJ_G0026435-10097.163Mus_caroli
ENSSPUG00000003204PABPC410089.423ENSMUSG00000011257Pabpc410096.429Mus_musculus
ENSSPUG00000003204PABPC49985.385MGP_PahariEiJ_G0028765Pabpc410097.872Mus_pahari
ENSSPUG00000003204PABPC49971.100MGP_SPRETEiJ_G0027415Pabpc410097.163Mus_spretus
ENSSPUG00000003204PABPC49549.172ENSMPUG00000006836-10048.425Mustela_putorius_furo
ENSSPUG00000003204PABPC410087.405ENSMPUG00000014414-9987.557Mustela_putorius_furo
ENSSPUG00000003204PABPC410090.545ENSMLUG00000012068PABPC49990.545Myotis_lucifugus
ENSSPUG00000003204PABPC410090.545ENSNGAG00000018292Pabpc49990.545Nannospalax_galili
ENSSPUG00000003204PABPC46691.667ENSNBRG00000010047-7291.667Neolamprologus_brichardi
ENSSPUG00000003204PABPC46096.635ENSNBRG00000009708pabpc49896.635Neolamprologus_brichardi
ENSSPUG00000003204PABPC410090.000ENSNLEG00000011928PABPC49990.000Nomascus_leucogenys
ENSSPUG00000003204PABPC48592.949ENSOPRG00000011984PABPC48792.632Ochotona_princeps
ENSSPUG00000003204PABPC49980.761ENSODEG00000017434-9980.973Octodon_degus
ENSSPUG00000003204PABPC45383.571ENSODEG00000013457-10083.571Octodon_degus
ENSSPUG00000003204PABPC410089.524ENSODEG00000006592-9989.524Octodon_degus
ENSSPUG00000003204PABPC410086.328ENSONIG00000008176pabpc49986.963Oreochromis_niloticus
ENSSPUG00000003204PABPC410094.286ENSOANG00000010001PABPC410094.286Ornithorhynchus_anatinus
ENSSPUG00000003204PABPC49687.184ENSOCUG00000000562PABPC48887.184Oryctolagus_cuniculus
ENSSPUG00000003204PABPC49993.210ENSORLG00000017479pabpc49993.210Oryzias_latipes
ENSSPUG00000003204PABPC49993.210ENSORLG00020018644pabpc49993.210Oryzias_latipes_hni
ENSSPUG00000003204PABPC49993.210ENSORLG00015015042pabpc49993.210Oryzias_latipes_hsok
ENSSPUG00000003204PABPC49986.817ENSOMEG00000014410pabpc49986.825Oryzias_melastigma
ENSSPUG00000003204PABPC410087.211ENSOGAG00000004067PABPC49987.365Otolemur_garnettii
ENSSPUG00000003204PABPC410087.253ENSOARG00000020060PABPC49987.405Ovis_aries
ENSSPUG00000003204PABPC410090.000ENSPPAG00000043625PABPC49990.000Pan_paniscus
ENSSPUG00000003204PABPC410090.159ENSPPRG00000024727PABPC49990.159Panthera_pardus
ENSSPUG00000003204PABPC410090.159ENSPTIG00000005829PABPC49990.159Panthera_tigris_altaica
ENSSPUG00000003204PABPC410090.000ENSPTRG00000000573PABPC49990.000Pan_troglodytes
ENSSPUG00000003204PABPC410090.159ENSPANG00000009484PABPC49990.159Papio_anubis
ENSSPUG00000003204PABPC49987.025ENSPKIG00000025356pabpc49987.658Paramormyrops_kingsleyae
ENSSPUG00000003204PABPC410096.508ENSPSIG00000016892PABPC410096.508Pelodiscus_sinensis
ENSSPUG00000003204PABPC410084.554ENSPMGG00000009073pabpc49984.579Periophthalmus_magnuspinnatus
ENSSPUG00000003204PABPC410089.048ENSPEMG00000023569-9989.048Peromyscus_maniculatus_bairdii
ENSSPUG00000003204PABPC49984.317ENSPEMG00000024193-9985.039Peromyscus_maniculatus_bairdii
ENSSPUG00000003204PABPC48975.044ENSPMAG00000002836pabpc410075.524Petromyzon_marinus
ENSSPUG00000003204PABPC49773.292ENSPMAG00000007885pabpc49973.038Petromyzon_marinus
ENSSPUG00000003204PABPC49997.375ENSPCIG00000020674PABPC410097.375Phascolarctos_cinereus
ENSSPUG00000003204PABPC410085.533ENSPFOG00000002682pabpc49986.804Poecilia_formosa
ENSSPUG00000003204PABPC410085.692ENSPLAG00000010112pabpc49986.963Poecilia_latipinna
ENSSPUG00000003204PABPC49986.196ENSPMEG00000019739pabpc49986.804Poecilia_mexicana
ENSSPUG00000003204PABPC410086.486ENSPREG00000001589pabpc49987.122Poecilia_reticulata
ENSSPUG00000003204PABPC410087.253ENSPPYG00000001506PABPC49987.405Pongo_abelii
ENSSPUG00000003204PABPC410082.549ENSPCAG00000003341PABPC49982.701Procavia_capensis
ENSSPUG00000003204PABPC410089.382ENSPCOG00000023725-9989.540Propithecus_coquereli
ENSSPUG00000003204PABPC49971.454ENSPCOG00000025882-9586.000Propithecus_coquereli
ENSSPUG00000003204PABPC49986.195ENSPVAG00000002187PABPC49986.364Pteropus_vampyrus
ENSSPUG00000003204PABPC410086.486ENSPNYG00000006134pabpc49987.122Pundamilia_nyererei
ENSSPUG00000003204PABPC410086.572ENSPNAG00000024355pabpc410087.204Pygocentrus_nattereri
ENSSPUG00000003204PABPC410085.162ENSRNOG00000028592AABR07035074.19985.226Rattus_norvegicus
ENSSPUG00000003204PABPC410087.326ENSRNOG00000015642Pabpc49987.403Rattus_norvegicus
ENSSPUG00000003204PABPC410090.000ENSRBIG00000039761PABPC49990.000Rhinopithecus_bieti
ENSSPUG00000003204PABPC410090.000ENSRROG00000033355PABPC49990.000Rhinopithecus_roxellana
ENSSPUG00000003204PABPC410090.000ENSSBOG00000026193PABPC49990.000Saimiri_boliviensis_boliviensis
ENSSPUG00000003204PABPC410092.540ENSSHAG00000018139PABPC410092.540Sarcophilus_harrisii
ENSSPUG00000003204PABPC49988.119ENSSFOG00015023514pabpc49988.119Scleropages_formosus
ENSSPUG00000003204PABPC49986.262ENSSMAG00000009007pabpc49986.901Scophthalmus_maximus
ENSSPUG00000003204PABPC49987.159ENSSDUG00000012683pabpc49987.122Seriola_dumerili
ENSSPUG00000003204PABPC49987.159ENSSLDG00000013025pabpc49987.122Seriola_lalandi_dorsalis
ENSSPUG00000003204PABPC410080.425ENSSARG00000000310PABPC49980.577Sorex_araneus
ENSSPUG00000003204PABPC49986.998ENSSPAG00000009252pabpc49986.963Stegastes_partitus
ENSSPUG00000003204PABPC48945.811ENSSSCG00000036170-9645.234Sus_scrofa
ENSSPUG00000003204PABPC410090.000ENSSSCG00000003660-9990.000Sus_scrofa
ENSSPUG00000003204PABPC410092.030ENSTGUG00000001266PABPC410092.436Taeniopygia_guttata
ENSSPUG00000003204PABPC49986.102ENSTRUG00000005907pabpc49986.741Takifugu_rubripes
ENSSPUG00000003204PABPC49982.315ENSTNIG00000016902pabpc49982.315Tetraodon_nigroviridis
ENSSPUG00000003204PABPC49976.768ENSTBEG00000009035PABPC49976.768Tupaia_belangeri
ENSSPUG00000003204PABPC49967.201ENSTTRG00000014340PABPC49975.758Tursiops_truncatus
ENSSPUG00000003204PABPC410090.159ENSUAMG00000000303PABPC49990.159Ursus_americanus
ENSSPUG00000003204PABPC410091.441ENSUMAG00000019585PABPC49991.441Ursus_maritimus
ENSSPUG00000003204PABPC47972.861ENSVPAG00000010041PABPC47372.861Vicugna_pacos
ENSSPUG00000003204PABPC410090.159ENSVVUG00000005215PABPC49990.159Vulpes_vulpes
ENSSPUG00000003204PABPC410086.804ENSXETG00000010946pabpc410086.804Xenopus_tropicalis
ENSSPUG00000003204PABPC46298.810ENSXETG00000027221-10098.810Xenopus_tropicalis
ENSSPUG00000003204PABPC49991.688ENSXCOG00000013190pabpc49692.925Xiphophorus_couchianus
ENSSPUG00000003204PABPC410086.328ENSXMAG00000019007pabpc49986.963Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us