EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000003272 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 46450 bases
Position: chrQEPC01004150.1:30914-77363
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000004232	MMR_HSR1	PF01926.23	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000004498	-	1521	-	ENSSPUP00000004232	402 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000003272's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000003272's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000003272	-	57	53.846	ENSSPUG00000012235	-	67	53.846
ENSSPUG00000003272	-	65	70.611	ENSSPUG00000010063	-	95	68.953
ENSSPUG00000003272	-	68	87.500	ENSSPUG00000010036	-	94	87.500
ENSSPUG00000003272	-	53	78.140	ENSSPUG00000009760	-	98	78.140
ENSSPUG00000003272	-	52	53.810	ENSSPUG00000010046	-	72	53.810
ENSSPUG00000003272	-	63	67.717	ENSSPUG00000009848	-	80	71.739
ENSSPUG00000003272	-	52	44.498	ENSSPUG00000009896	-	87	47.120
ENSSPUG00000003272	-	60	50.820	ENSSPUG00000009816	-	66	55.251
ENSSPUG00000003272	-	58	53.498	ENSSPUG00000009782	-	78	59.669
ENSSPUG00000003272	-	57	54.274	ENSSPUG00000009775	-	58	53.617
ENSSPUG00000003272	-	56	65.198	ENSSPUG00000009833	-	87	65.198

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000003272	-	53	53.226	ENSG00000281887	GIMAP1-GIMAP5	64	53.226	Homo_sapiens
ENSSPUG00000003272	-	50	49.510	ENSG00000196329	GIMAP5	66	49.510	Homo_sapiens
ENSSPUG00000003272	-	50	53.960	ENSAPLG00000001066	-	82	53.960	Anas_platyrhynchos
ENSSPUG00000003272	-	53	46.262	ENSACAG00000017193	-	95	46.262	Anolis_carolinensis
ENSSPUG00000003272	-	56	52.857	ENSACAG00000016727	-	82	52.857	Anolis_carolinensis
ENSSPUG00000003272	-	63	51.953	ENSACAG00000028535	-	79	56.019	Anolis_carolinensis
ENSSPUG00000003272	-	50	50.980	ENSBTAG00000000715	-	64	50.980	Bos_taurus
ENSSPUG00000003272	-	59	46.025	ENSBTAG00000039588	-	70	49.275	Bos_taurus
ENSSPUG00000003272	-	50	50.490	ENSBTAG00000004894	-	74	55.063	Bos_taurus
ENSSPUG00000003272	-	50	50.490	ENSCJAG00000020126	-	67	50.490	Callithrix_jacchus
ENSSPUG00000003272	-	50	50.490	ENSCAFG00000024817	-	60	50.490	Canis_familiaris
ENSSPUG00000003272	-	51	49.758	ENSCHIG00000020434	-	79	53.988	Capra_hircus
ENSSPUG00000003272	-	51	51.691	ENSCHIG00000000607	-	69	51.691	Capra_hircus
ENSSPUG00000003272	-	53	49.327	ENSCHIG00000013093	-	75	49.327	Capra_hircus
ENSSPUG00000003272	-	50	50.490	ENSCHIG00000000431	-	66	50.490	Capra_hircus
ENSSPUG00000003272	-	50	52.941	ENSTSYG00000010016	-	68	52.941	Carlito_syrichta
ENSSPUG00000003272	-	51	48.544	ENSCAPG00000007631	-	66	48.293	Cavia_aperea
ENSSPUG00000003272	-	51	48.544	ENSCPOG00000003376	-	66	48.293	Cavia_porcellus
ENSSPUG00000003272	-	50	51.961	ENSCCAG00000009203	-	66	51.961	Cebus_capucinus
ENSSPUG00000003272	-	50	52.683	ENSCLAG00000001322	-	64	51.923	Chinchilla_lanigera
ENSSPUG00000003272	-	51	51.442	ENSCLAG00000001246	-	67	51.442	Chinchilla_lanigera
ENSSPUG00000003272	-	50	50.490	ENSCSAG00000006865	-	63	50.490	Chlorocebus_sabaeus
ENSSPUG00000003272	-	51	50.000	ENSCANG00000029802	-	67	50.000	Colobus_angolensis_palliatus
ENSSPUG00000003272	-	53	45.536	ENSCGRG00001024196	-	72	45.536	Cricetulus_griseus_chok1gshd
ENSSPUG00000003272	-	50	48.259	ENSCGRG00001024272	-	66	48.259	Cricetulus_griseus_chok1gshd
ENSSPUG00000003272	-	53	45.536	ENSCGRG00000015177	-	72	45.536	Cricetulus_griseus_crigri
ENSSPUG00000003272	-	50	48.259	ENSCGRG00000014686	-	66	48.259	Cricetulus_griseus_crigri
ENSSPUG00000003272	-	52	50.711	ENSECAG00000029716	-	67	50.711	Equus_caballus
ENSSPUG00000003272	-	52	51.185	ENSECAG00000007663	-	68	51.185	Equus_caballus
ENSSPUG00000003272	-	51	51.456	ENSECAG00000007668	-	67	51.456	Equus_caballus
ENSSPUG00000003272	-	52	49.770	ENSEEUG00000006852	-	79	49.545	Erinaceus_europaeus
ENSSPUG00000003272	-	50	50.000	ENSFCAG00000042622	-	66	50.000	Felis_catus
ENSSPUG00000003272	-	53	53.226	ENSGGOG00000014216	-	70	52.804	Gorilla_gorilla
ENSSPUG00000003272	-	51	49.510	ENSSTOG00000021076	-	66	49.510	Ictidomys_tridecemlineatus
ENSSPUG00000003272	-	59	35.503	ENSKMAG00000007013	-	82	35.632	Kryptolebias_marmoratus
ENSSPUG00000003272	-	50	51.485	ENSMFAG00000044951	-	63	51.485	Macaca_fascicularis
ENSSPUG00000003272	-	56	50.490	ENSMMUG00000001270	-	82	47.679	Macaca_mulatta
ENSSPUG00000003272	-	50	50.980	ENSMNEG00000028821	-	66	50.980	Macaca_nemestrina
ENSSPUG00000003272	-	50	50.490	ENSMLEG00000029622	-	66	50.490	Mandrillus_leucophaeus
ENSSPUG00000003272	-	50	51.980	ENSMICG00000027282	-	65	51.980	Microcebus_murinus
ENSSPUG00000003272	-	50	51.471	ENSMICG00000035983	-	67	50.481	Microcebus_murinus
ENSSPUG00000003272	-	63	42.857	ENSMOCG00000018608	-	68	49.751	Microtus_ochrogaster
ENSSPUG00000003272	-	51	50.242	ENSMOCG00000002213	-	92	50.242	Microtus_ochrogaster
ENSSPUG00000003272	-	54	49.782	ENSMODG00000003669	-	72	49.782	Monodelphis_domestica
ENSSPUG00000003272	-	52	49.772	MGP_CAROLIEiJ_G0028354	Gimap5	71	49.772	Mus_caroli
ENSSPUG00000003272	-	66	41.391	MGP_CAROLIEiJ_G0028355	Gimap3	71	52.093	Mus_caroli
ENSSPUG00000003272	-	52	49.772	ENSMUSG00000039264	Gimap3	72	51.152	Mus_musculus
ENSSPUG00000003272	-	52	49.772	ENSMUSG00000043505	Gimap5	71	49.772	Mus_musculus
ENSSPUG00000003272	-	50	51.244	MGP_PahariEiJ_G0022104	Gimap5	65	51.244	Mus_pahari
ENSSPUG00000003272	-	51	51.196	MGP_PahariEiJ_G0022105	Gimap3	69	51.196	Mus_pahari
ENSSPUG00000003272	-	53	47.085	ENSMLUG00000023466	-	78	47.085	Myotis_lucifugus
ENSSPUG00000003272	-	50	50.000	ENSMLUG00000025954	-	97	50.000	Myotis_lucifugus
ENSSPUG00000003272	-	51	44.928	ENSMLUG00000026545	-	68	44.928	Myotis_lucifugus
ENSSPUG00000003272	-	57	47.257	ENSMLUG00000007287	-	76	47.257	Myotis_lucifugus
ENSSPUG00000003272	-	50	43.689	ENSMLUG00000022809	-	80	43.689	Myotis_lucifugus
ENSSPUG00000003272	-	51	47.087	ENSMLUG00000028966	-	67	47.087	Myotis_lucifugus
ENSSPUG00000003272	-	62	43.346	ENSNGAG00000022013	-	66	53.431	Nannospalax_galili
ENSSPUG00000003272	-	51	52.913	ENSNGAG00000020526	-	69	52.913	Nannospalax_galili
ENSSPUG00000003272	-	50	50.490	ENSNLEG00000003844	-	66	50.490	Nomascus_leucogenys
ENSSPUG00000003272	-	63	45.185	ENSMEUG00000016596	-	75	53.922	Notamacropus_eugenii
ENSSPUG00000003272	-	53	51.131	ENSMEUG00000000849	-	81	51.131	Notamacropus_eugenii
ENSSPUG00000003272	-	50	50.249	ENSOCUG00000025892	-	87	50.249	Oryctolagus_cuniculus
ENSSPUG00000003272	-	52	48.571	ENSOCUG00000005976	-	66	48.571	Oryctolagus_cuniculus
ENSSPUG00000003272	-	51	49.515	ENSOGAG00000009145	-	67	49.515	Otolemur_garnettii
ENSSPUG00000003272	-	50	53.552	ENSOARG00000001183	-	91	53.552	Ovis_aries
ENSSPUG00000003272	-	51	51.208	ENSOARG00000001589	-	60	51.208	Ovis_aries
ENSSPUG00000003272	-	50	50.490	ENSOARG00000001288	-	66	50.490	Ovis_aries
ENSSPUG00000003272	-	51	51.208	ENSOARG00000001645	-	67	51.208	Ovis_aries
ENSSPUG00000003272	-	53	53.226	ENSPPAG00000042001	-	70	52.804	Pan_paniscus
ENSSPUG00000003272	-	50	50.000	ENSPPRG00000017393	-	66	50.000	Panthera_pardus
ENSSPUG00000003272	-	50	50.000	ENSPTIG00000012405	-	66	50.000	Panthera_tigris_altaica
ENSSPUG00000003272	-	53	52.419	ENSPTRG00000028356	-	66	52.419	Pan_troglodytes
ENSSPUG00000003272	-	53	52.419	ENSPTRG00000034465	GIMAP1	70	52.336	Pan_troglodytes
ENSSPUG00000003272	-	50	50.980	ENSPANG00000030896	-	66	50.980	Papio_anubis
ENSSPUG00000003272	-	58	44.635	ENSPSIG00000016016	-	75	44.635	Pelodiscus_sinensis
ENSSPUG00000003272	-	50	48.661	ENSPSIG00000006796	-	97	50.754	Pelodiscus_sinensis
ENSSPUG00000003272	-	58	48.069	ENSPSIG00000000573	-	98	47.863	Pelodiscus_sinensis
ENSSPUG00000003272	-	63	42.143	ENSPEMG00000019236	-	66	49.500	Peromyscus_maniculatus_bairdii
ENSSPUG00000003272	-	62	43.077	ENSPEMG00000014554	-	77	46.320	Peromyscus_maniculatus_bairdii
ENSSPUG00000003272	-	53	53.846	ENSPCIG00000008658	-	69	53.846	Phascolarctos_cinereus
ENSSPUG00000003272	-	51	47.059	ENSPCIG00000001766	-	72	46.860	Phascolarctos_cinereus
ENSSPUG00000003272	-	50	49.510	ENSPPYG00000018173	-	62	49.510	Pongo_abelii
ENSSPUG00000003272	-	51	50.725	ENSPCOG00000016811	-	66	50.725	Propithecus_coquereli
ENSSPUG00000003272	-	52	46.575	ENSRNOG00000008416	Gimap5	72	50.000	Rattus_norvegicus
ENSSPUG00000003272	-	51	50.485	ENSRBIG00000035290	-	67	50.485	Rhinopithecus_bieti
ENSSPUG00000003272	-	51	50.485	ENSRROG00000028817	-	64	50.485	Rhinopithecus_roxellana
ENSSPUG00000003272	-	50	51.471	ENSSBOG00000032164	-	66	51.471	Saimiri_boliviensis_boliviensis
ENSSPUG00000003272	-	50	52.736	ENSSHAG00000000843	-	85	52.736	Sarcophilus_harrisii
ENSSPUG00000003272	-	50	50.980	ENSSARG00000004634	-	68	50.980	Sorex_araneus
ENSSPUG00000003272	-	55	46.725	ENSSSCG00000039407	-	80	44.015	Sus_scrofa
ENSSPUG00000003272	-	52	51.429	ENSTBEG00000000035	-	70	51.429	Tupaia_belangeri
ENSSPUG00000003272	-	51	48.792	ENSTTRG00000011008	-	86	48.792	Tursiops_truncatus
ENSSPUG00000003272	-	63	40.299	ENSTTRG00000003204	-	69	49.754	Tursiops_truncatus
ENSSPUG00000003272	-	50	51.852	ENSUMAG00000018133	-	69	51.852	Ursus_maritimus
ENSSPUG00000003272	-	51	49.758	ENSVPAG00000011693	-	67	49.758	Vicugna_pacos