EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000003380 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 20023 bases
Position: chrQEPC01003743.1:4079600-4099622
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000004392	ResIII	PF04851.15	5.3e-12	1	1
ENSSPUP00000004392	DEAD	PF00270.29	1.4e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000004670	-	1140	-	ENSSPUP00000004392	379 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000003380's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000003380's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000003380	-	90	88.325	ENSG00000162669	HFM1	97	37.410	Homo_sapiens
ENSSPUG00000003380	-	90	90.355	ENSCAFG00020013595	-	79	90.355	Canis_lupus_dingo
ENSSPUG00000003380	-	92	87.129	ENSCANG00000034052	-	79	87.129	Colobus_angolensis_palliatus
ENSSPUG00000003380	-	88	74.894	ENSEASG00005015424	HFM1	86	74.894	Equus_asinus_asinus
ENSSPUG00000003380	-	95	67.778	ENSGAGG00000025197	-	94	67.778	Gopherus_agassizii
ENSSPUG00000003380	-	90	88.325	ENSHGLG00000007780	-	79	88.325	Heterocephalus_glaber_female
ENSSPUG00000003380	-	90	88.325	ENSHGLG00100019217	-	78	88.325	Heterocephalus_glaber_male
ENSSPUG00000003380	-	88	89.340	ENSSTOG00000008477	-	77	89.340	Ictidomys_tridecemlineatus
ENSSPUG00000003380	-	92	87.129	ENSMNEG00000039833	-	80	87.129	Macaca_nemestrina
ENSSPUG00000003380	-	92	87.129	ENSMLEG00000027571	-	80	87.129	Mandrillus_leucophaeus
ENSSPUG00000003380	-	64	70.854	ENSMAMG00000004623	hfm1	86	70.854	Mastacembelus_armatus
ENSSPUG00000003380	-	52	72.081	ENSMMOG00000006148	hfm1	65	72.081	Mola_mola
ENSSPUG00000003380	-	89	85.787	ENSMUSG00000043410	Hfm1	74	90.071	Mus_musculus
ENSSPUG00000003380	-	52	85.279	MGP_PahariEiJ_G0017268	Hfm1	50	90.071	Mus_pahari
ENSSPUG00000003380	-	89	84.772	MGP_SPRETEiJ_G0028495	Hfm1	74	89.362	Mus_spretus
ENSSPUG00000003380	-	90	88.832	ENSODEG00000006243	-	79	88.832	Octodon_degus
ENSSPUG00000003380	-	68	90.517	ENSOCUG00000010974	-	72	90.517	Oryctolagus_cuniculus
ENSSPUG00000003380	-	52	71.212	ENSORLG00000026844	hfm1	64	71.212	Oryzias_latipes
ENSSPUG00000003380	-	90	47.354	ENSPKIG00000003810	hfm1	95	47.354	Paramormyrops_kingsleyae
ENSSPUG00000003380	-	52	70.558	ENSPMGG00000011059	hfm1	54	70.787	Periophthalmus_magnuspinnatus
ENSSPUG00000003380	-	62	63.713	ENSPREG00000007803	hfm1	77	63.713	Poecilia_reticulata
ENSSPUG00000003380	-	89	56.853	ENSPCOG00000026252	-	74	56.853	Propithecus_coquereli
ENSSPUG00000003380	-	92	86.634	ENSRBIG00000033899	-	79	86.634	Rhinopithecus_bieti
ENSSPUG00000003380	-	68	90.517	ENSSARG00000009598	-	72	90.517	Sorex_araneus
ENSSPUG00000003380	-	88	66.842	ENSUAMG00000008754	-	71	87.879	Ursus_americanus
ENSSPUG00000003380	-	90	88.384	ENSUMAG00000001345	-	80	88.384	Ursus_maritimus
ENSSPUG00000003380	-	88	89.362	ENSVVUG00000020760	HFM1	77	89.362	Vulpes_vulpes