EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000003472 (Gene tree)
Gene ID: -
Gene Symbol: TRIT1
Alias: FLJ20061|IPT
Full Name: tRNA isopentenyltransferase 1
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 16452 bases
Position: chrQEPC01013809.1:556598-573049
Accession: 20286
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000004557	IPPT	PF01715.17	1.6e-58	1	1
ENSSPUP00000004567	IPPT	PF01715.17	7.8e-33	1	2
ENSSPUP00000004567	IPPT	PF01715.17	7.8e-33	2	2
ENSSPUP00000004567	zf-C2H2_jaz	PF12171.8	8.9e-06	1	1
ENSSPUP00000004557	zf-C2H2_jaz	PF12171.8	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000004846	TRIT1-202	1293	-	ENSSPUP00000004567	430 (aa)	-	-
ENSSPUT00000004836	TRIT1-201	1431	-	ENSSPUP00000004557	476 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000003472's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000003472's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000003472	TRIT1	79	72.396	ENSG00000043514	TRIT1	99	73.373	Homo_sapiens
ENSSPUG00000003472	TRIT1	77	61.111	ENSAPOG00000020918	trit1	87	59.102	Acanthochromis_polyacanthus
ENSSPUG00000003472	TRIT1	78	72.632	ENSAMEG00000004342	TRIT1	81	72.632	Ailuropoda_melanoleuca
ENSSPUG00000003472	TRIT1	73	62.393	ENSACIG00000017409	trit1	83	60.465	Amphilophus_citrinellus
ENSSPUG00000003472	TRIT1	77	61.111	ENSAOCG00000009850	trit1	78	61.111	Amphiprion_ocellaris
ENSSPUG00000003472	TRIT1	77	61.111	ENSAPEG00000001481	trit1	78	61.111	Amphiprion_percula
ENSSPUG00000003472	TRIT1	80	58.481	ENSATEG00000005426	trit1	83	58.481	Anabas_testudineus
ENSSPUG00000003472	TRIT1	72	65.915	ENSAPLG00000011421	TRIT1	98	65.915	Anas_platyrhynchos
ENSSPUG00000003472	TRIT1	77	71.390	ENSACAG00000002280	TRIT1	76	71.390	Anolis_carolinensis
ENSSPUG00000003472	TRIT1	79	72.135	ENSANAG00000030732	TRIT1	93	71.588	Aotus_nancymaae
ENSSPUG00000003472	TRIT1	77	60.582	ENSACLG00000004920	trit1	79	60.582	Astatotilapia_calliptera
ENSSPUG00000003472	TRIT1	76	61.749	ENSAMXG00000010959	trit1	82	61.749	Astyanax_mexicanus
ENSSPUG00000003472	TRIT1	84	71.290	ENSBTAG00000013832	TRIT1	88	71.290	Bos_taurus
ENSSPUG00000003472	TRIT1	73	32.172	WBGene00001740	gro-1	87	33.505	Caenorhabditis_elegans
ENSSPUG00000003472	TRIT1	79	72.396	ENSCJAG00000002620	TRIT1	81	73.702	Callithrix_jacchus
ENSSPUG00000003472	TRIT1	84	69.903	ENSCAFG00000003048	TRIT1	88	69.903	Canis_familiaris
ENSSPUG00000003472	TRIT1	84	67.612	ENSCAFG00020003875	TRIT1	91	78.421	Canis_lupus_dingo
ENSSPUG00000003472	TRIT1	84	70.048	ENSCHIG00000013259	TRIT1	88	70.048	Capra_hircus
ENSSPUG00000003472	TRIT1	79	72.135	ENSTSYG00000004363	TRIT1	97	57.595	Carlito_syrichta
ENSSPUG00000003472	TRIT1	67	70.859	ENSCAPG00000017001	TRIT1	84	70.859	Cavia_aperea
ENSSPUG00000003472	TRIT1	77	72.340	ENSCPOG00000012820	TRIT1	80	72.340	Cavia_porcellus
ENSSPUG00000003472	TRIT1	84	68.370	ENSCCAG00000031271	TRIT1	94	73.563	Cebus_capucinus
ENSSPUG00000003472	TRIT1	77	69.657	ENSCATG00000034344	TRIT1	81	73.944	Cercocebus_atys
ENSSPUG00000003472	TRIT1	84	68.382	ENSCLAG00000009828	TRIT1	87	68.382	Chinchilla_lanigera
ENSSPUG00000003472	TRIT1	77	73.138	ENSCSAG00000001137	TRIT1	91	73.138	Chlorocebus_sabaeus
ENSSPUG00000003472	TRIT1	79	72.917	ENSCHOG00000000435	TRIT1	82	72.917	Choloepus_hoffmanni
ENSSPUG00000003472	TRIT1	78	41.432	ENSCSAVG00000002050	-	85	41.432	Ciona_savignyi
ENSSPUG00000003472	TRIT1	77	72.872	ENSCANG00000043008	TRIT1	81	74.296	Colobus_angolensis_palliatus
ENSSPUG00000003472	TRIT1	77	72.606	ENSCGRG00001001894	Trit1	81	72.606	Cricetulus_griseus_chok1gshd
ENSSPUG00000003472	TRIT1	79	71.169	ENSCGRG00000007059	Trit1	86	71.169	Cricetulus_griseus_crigri
ENSSPUG00000003472	TRIT1	73	60.440	ENSCSEG00000009574	trit1	83	60.154	Cynoglossus_semilaevis
ENSSPUG00000003472	TRIT1	76	60.267	ENSDARG00000032876	trit1	85	60.284	Danio_rerio
ENSSPUG00000003472	TRIT1	79	62.247	ENSDNOG00000001994	TRIT1	84	62.247	Dasypus_novemcinctus
ENSSPUG00000003472	TRIT1	70	71.345	ENSDORG00000012449	Trit1	78	71.345	Dipodomys_ordii
ENSSPUG00000003472	TRIT1	77	37.284	FBgn0043799	CG31381	84	37.284	Drosophila_melanogaster
ENSSPUG00000003472	TRIT1	74	72.283	ENSETEG00000008733	TRIT1	87	72.283	Echinops_telfairi
ENSSPUG00000003472	TRIT1	78	53.385	ENSEBUG00000012845	trit1	85	53.385	Eptatretus_burgeri
ENSSPUG00000003472	TRIT1	70	83.673	ENSECAG00000010597	TRIT1	76	72.959	Equus_caballus
ENSSPUG00000003472	TRIT1	84	55.635	ENSEEUG00000009269	TRIT1	88	55.635	Erinaceus_europaeus
ENSSPUG00000003472	TRIT1	76	54.692	ENSELUG00000017278	trit1	77	54.692	Esox_lucius
ENSSPUG00000003472	TRIT1	79	73.177	ENSFCAG00000006029	TRIT1	82	73.177	Felis_catus
ENSSPUG00000003472	TRIT1	83	72.953	ENSFALG00000000532	TRIT1	99	72.953	Ficedula_albicollis
ENSSPUG00000003472	TRIT1	77	69.767	ENSFDAG00000003098	TRIT1	85	69.767	Fukomys_damarensis
ENSSPUG00000003472	TRIT1	76	61.680	ENSGMOG00000006522	trit1	88	61.680	Gadus_morhua
ENSSPUG00000003472	TRIT1	78	74.151	ENSGALG00000003851	TRIT1	84	74.151	Gallus_gallus
ENSSPUG00000003472	TRIT1	62	57.912	ENSGAFG00000018636	trit1	100	60.116	Gambusia_affinis
ENSSPUG00000003472	TRIT1	77	59.269	ENSGACG00000008493	trit1	88	59.269	Gasterosteus_aculeatus
ENSSPUG00000003472	TRIT1	83	78.908	ENSGAGG00000000522	TRIT1	99	78.908	Gopherus_agassizii
ENSSPUG00000003472	TRIT1	79	72.396	ENSGGOG00000010070	TRIT1	93	69.006	Gorilla_gorilla
ENSSPUG00000003472	TRIT1	77	60.847	ENSHBUG00000018999	trit1	79	60.847	Haplochromis_burtoni
ENSSPUG00000003472	TRIT1	80	64.103	ENSHGLG00000009564	-	85	64.103	Heterocephalus_glaber_female
ENSSPUG00000003472	TRIT1	77	72.606	ENSHGLG00000010308	-	81	72.606	Heterocephalus_glaber_female
ENSSPUG00000003472	TRIT1	75	65.549	ENSHGLG00100018159	-	98	65.549	Heterocephalus_glaber_male
ENSSPUG00000003472	TRIT1	77	72.606	ENSHGLG00100015382	-	82	72.606	Heterocephalus_glaber_male
ENSSPUG00000003472	TRIT1	74	60.989	ENSHCOG00000006755	trit1	90	54.872	Hippocampus_comes
ENSSPUG00000003472	TRIT1	76	62.299	ENSIPUG00000021822	trit1	78	62.299	Ictalurus_punctatus
ENSSPUG00000003472	TRIT1	77	72.606	ENSSTOG00000006446	TRIT1	78	72.606	Ictidomys_tridecemlineatus
ENSSPUG00000003472	TRIT1	79	63.077	ENSJJAG00000000300	-	82	63.077	Jaculus_jaculus
ENSSPUG00000003472	TRIT1	84	64.234	ENSJJAG00000000316	-	91	64.234	Jaculus_jaculus
ENSSPUG00000003472	TRIT1	77	61.538	ENSKMAG00000021788	trit1	79	61.538	Kryptolebias_marmoratus
ENSSPUG00000003472	TRIT1	76	60.106	ENSLBEG00000024262	trit1	78	60.106	Labrus_bergylta
ENSSPUG00000003472	TRIT1	82	63.260	ENSLACG00000013861	TRIT1	80	65.306	Latimeria_chalumnae
ENSSPUG00000003472	TRIT1	76	61.316	ENSLOCG00000002057	trit1	80	61.316	Lepisosteus_oculatus
ENSSPUG00000003472	TRIT1	77	72.074	ENSLAFG00000016876	TRIT1	81	72.074	Loxodonta_africana
ENSSPUG00000003472	TRIT1	84	68.127	ENSMFAG00000001316	TRIT1	97	58.861	Macaca_fascicularis
ENSSPUG00000003472	TRIT1	84	68.127	ENSMMUG00000016220	TRIT1	97	58.861	Macaca_mulatta
ENSSPUG00000003472	TRIT1	84	68.127	ENSMNEG00000023137	TRIT1	97	58.861	Macaca_nemestrina
ENSSPUG00000003472	TRIT1	77	72.606	ENSMLEG00000035296	TRIT1	81	73.944	Mandrillus_leucophaeus
ENSSPUG00000003472	TRIT1	77	60.317	ENSMAMG00000005868	trit1	79	60.317	Mastacembelus_armatus
ENSSPUG00000003472	TRIT1	77	60.317	ENSMZEG00005011506	trit1	79	60.317	Maylandia_zebra
ENSSPUG00000003472	TRIT1	76	74.194	ENSMGAG00000005516	TRIT1	99	74.194	Meleagris_gallopavo
ENSSPUG00000003472	TRIT1	77	72.414	ENSMAUG00000000399	Trit1	81	72.414	Mesocricetus_auratus
ENSSPUG00000003472	TRIT1	79	72.135	ENSMICG00000016294	TRIT1	82	72.135	Microcebus_murinus
ENSSPUG00000003472	TRIT1	77	74.202	ENSMOCG00000008173	Trit1	81	74.202	Microtus_ochrogaster
ENSSPUG00000003472	TRIT1	83	58.911	ENSMMOG00000021140	trit1	89	60.892	Mola_mola
ENSSPUG00000003472	TRIT1	78	71.503	ENSMODG00000017650	TRIT1	84	71.503	Monodelphis_domestica
ENSSPUG00000003472	TRIT1	77	59.259	ENSMALG00000017843	trit1	83	57.323	Monopterus_albus
ENSSPUG00000003472	TRIT1	84	69.100	MGP_CAROLIEiJ_G0026428	Trit1	88	69.100	Mus_caroli
ENSSPUG00000003472	TRIT1	84	69.343	ENSMUSG00000028653	Trit1	88	69.343	Mus_musculus
ENSSPUG00000003472	TRIT1	84	69.586	MGP_PahariEiJ_G0028758	Trit1	88	69.586	Mus_pahari
ENSSPUG00000003472	TRIT1	84	69.100	MGP_SPRETEiJ_G0027408	Trit1	88	69.100	Mus_spretus
ENSSPUG00000003472	TRIT1	84	69.682	ENSMPUG00000014291	TRIT1	87	69.682	Mustela_putorius_furo
ENSSPUG00000003472	TRIT1	77	73.670	ENSMLUG00000000334	TRIT1	80	73.670	Myotis_lucifugus
ENSSPUG00000003472	TRIT1	79	72.917	ENSNLEG00000012038	TRIT1	93	69.883	Nomascus_leucogenys
ENSSPUG00000003472	TRIT1	69	81.633	ENSMEUG00000005217	TRIT1	64	81.633	Notamacropus_eugenii
ENSSPUG00000003472	TRIT1	51	62.185	ENSOPRG00000003205	-	53	62.712	Ochotona_princeps
ENSSPUG00000003472	TRIT1	79	68.286	ENSODEG00000006117	TRIT1	83	68.286	Octodon_degus
ENSSPUG00000003472	TRIT1	77	60.313	ENSONIG00000015407	trit1	80	60.313	Oreochromis_niloticus
ENSSPUG00000003472	TRIT1	76	72.849	ENSOANG00000002779	TRIT1	96	71.958	Ornithorhynchus_anatinus
ENSSPUG00000003472	TRIT1	79	73.629	ENSOCUG00000002054	TRIT1	82	73.629	Oryctolagus_cuniculus
ENSSPUG00000003472	TRIT1	76	61.600	ENSORLG00000005802	trit1	81	61.600	Oryzias_latipes
ENSSPUG00000003472	TRIT1	84	57.246	ENSORLG00020005519	trit1	90	57.246	Oryzias_latipes_hni
ENSSPUG00000003472	TRIT1	84	57.971	ENSORLG00015018715	trit1	90	57.971	Oryzias_latipes_hsok
ENSSPUG00000003472	TRIT1	81	60.101	ENSOMEG00000006569	trit1	86	60.101	Oryzias_melastigma
ENSSPUG00000003472	TRIT1	79	71.948	ENSOGAG00000009571	TRIT1	82	71.948	Otolemur_garnettii
ENSSPUG00000003472	TRIT1	84	70.874	ENSOARG00000020140	TRIT1	88	70.874	Ovis_aries
ENSSPUG00000003472	TRIT1	79	72.396	ENSPPAG00000023930	TRIT1	93	69.298	Pan_paniscus
ENSSPUG00000003472	TRIT1	79	73.438	ENSPPRG00000009680	TRIT1	82	73.438	Panthera_pardus
ENSSPUG00000003472	TRIT1	79	73.438	ENSPTIG00000021134	TRIT1	82	73.438	Panthera_tigris_altaica
ENSSPUG00000003472	TRIT1	79	72.396	ENSPTRG00000000579	TRIT1	93	69.298	Pan_troglodytes
ENSSPUG00000003472	TRIT1	84	67.883	ENSPANG00000018125	TRIT1	97	58.228	Papio_anubis
ENSSPUG00000003472	TRIT1	77	60.218	ENSPKIG00000024527	trit1	96	60.218	Paramormyrops_kingsleyae
ENSSPUG00000003472	TRIT1	70	73.463	ENSPSIG00000017073	TRIT1	99	73.463	Pelodiscus_sinensis
ENSSPUG00000003472	TRIT1	74	64.167	ENSPMGG00000018445	trit1	91	63.441	Periophthalmus_magnuspinnatus
ENSSPUG00000003472	TRIT1	79	73.177	ENSPEMG00000022418	Trit1	82	73.177	Peromyscus_maniculatus_bairdii
ENSSPUG00000003472	TRIT1	68	78.723	ENSPMAG00000008892	trit1	97	57.254	Petromyzon_marinus
ENSSPUG00000003472	TRIT1	78	71.059	ENSPCIG00000020666	TRIT1	84	71.059	Phascolarctos_cinereus
ENSSPUG00000003472	TRIT1	83	55.231	ENSPFOG00000014626	trit1	86	55.231	Poecilia_formosa
ENSSPUG00000003472	TRIT1	57	61.765	ENSPLAG00000011669	trit1	82	60.791	Poecilia_latipinna
ENSSPUG00000003472	TRIT1	57	62.868	ENSPREG00000018182	trit1	78	62.868	Poecilia_reticulata
ENSSPUG00000003472	TRIT1	79	72.396	ENSPPYG00000001499	TRIT1	82	72.396	Pongo_abelii
ENSSPUG00000003472	TRIT1	57	73.878	ENSPCAG00000014680	TRIT1	89	62.229	Procavia_capensis
ENSSPUG00000003472	TRIT1	79	72.135	ENSPCOG00000014150	TRIT1	82	72.135	Propithecus_coquereli
ENSSPUG00000003472	TRIT1	69	82.609	ENSPVAG00000003344	TRIT1	64	82.609	Pteropus_vampyrus
ENSSPUG00000003472	TRIT1	51	58.915	ENSPNYG00000001003	trit1	83	58.915	Pundamilia_nyererei
ENSSPUG00000003472	TRIT1	77	60.976	ENSPNAG00000009466	trit1	79	62.136	Pygocentrus_nattereri
ENSSPUG00000003472	TRIT1	84	66.353	ENSRNOG00000014274	Trit1	88	66.353	Rattus_norvegicus
ENSSPUG00000003472	TRIT1	77	73.138	ENSRBIG00000043179	TRIT1	100	56.442	Rhinopithecus_bieti
ENSSPUG00000003472	TRIT1	77	73.138	ENSRROG00000042670	TRIT1	100	56.442	Rhinopithecus_roxellana
ENSSPUG00000003472	TRIT1	76	32.723	YOR274W	-	85	32.723	Saccharomyces_cerevisiae
ENSSPUG00000003472	TRIT1	84	68.370	ENSSBOG00000024417	TRIT1	81	75.177	Saimiri_boliviensis_boliviensis
ENSSPUG00000003472	TRIT1	77	72.032	ENSSHAG00000018363	TRIT1	90	72.032	Sarcophilus_harrisii
ENSSPUG00000003472	TRIT1	82	56.892	ENSSFOG00015007284	trit1	79	56.892	Scleropages_formosus
ENSSPUG00000003472	TRIT1	84	56.501	ENSSMAG00000020730	trit1	89	56.501	Scophthalmus_maximus
ENSSPUG00000003472	TRIT1	77	60.053	ENSSDUG00000001683	trit1	78	60.053	Seriola_dumerili
ENSSPUG00000003472	TRIT1	73	59.945	ENSSLDG00000008379	trit1	82	58.333	Seriola_lalandi_dorsalis
ENSSPUG00000003472	TRIT1	78	73.846	ENSSARG00000004540	TRIT1	83	73.846	Sorex_araneus
ENSSPUG00000003472	TRIT1	75	61.878	ENSSPAG00000020745	trit1	81	61.878	Stegastes_partitus
ENSSPUG00000003472	TRIT1	51	64.732	ENSSSCG00000003667	-	92	76.647	Sus_scrofa
ENSSPUG00000003472	TRIT1	76	73.138	ENSTGUG00000001242	TRIT1	100	73.138	Taeniopygia_guttata
ENSSPUG00000003472	TRIT1	81	60.513	ENSTRUG00000013936	trit1	86	61.198	Takifugu_rubripes
ENSSPUG00000003472	TRIT1	77	59.737	ENSTNIG00000009240	trit1	84	59.737	Tetraodon_nigroviridis
ENSSPUG00000003472	TRIT1	68	85.714	ENSTBEG00000001317	TRIT1	62	85.714	Tupaia_belangeri
ENSSPUG00000003472	TRIT1	84	68.370	ENSTTRG00000005064	TRIT1	88	68.370	Tursiops_truncatus
ENSSPUG00000003472	TRIT1	78	72.895	ENSUMAG00000017299	TRIT1	73	72.895	Ursus_maritimus
ENSSPUG00000003472	TRIT1	84	69.682	ENSVPAG00000003008	TRIT1	87	69.682	Vicugna_pacos
ENSSPUG00000003472	TRIT1	77	63.969	ENSXETG00000010952	trit1	84	63.969	Xenopus_tropicalis
ENSSPUG00000003472	TRIT1	57	61.679	ENSXMAG00000016302	trit1	77	61.679	Xiphophorus_maculatus