EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000003540 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 11485 bases
Position: chrQEPC01010859.1:13157107-13168591
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000004586	PPR	PF01535.20	1e-14	1	2
ENSSPUP00000004586	PPR	PF01535.20	1e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000004866	-	2502	-	ENSSPUP00000004586	735 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000003540's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000003540's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000003540	-	84	58.517	ENSG00000248919	ATP5MF-PTCD1	92	52.789	Homo_sapiens
ENSSPUG00000003540	-	98	53.701	ENSG00000106246	PTCD1	99	52.789	Homo_sapiens
ENSSPUG00000003540	-	82	45.470	ENSAPOG00000010679	ptcd1	88	45.410	Acanthochromis_polyacanthus
ENSSPUG00000003540	-	83	59.420	ENSAMEG00000006224	-	79	59.420	Ailuropoda_melanoleuca
ENSSPUG00000003540	-	85	46.708	ENSACIG00000017861	ptcd1	86	46.552	Amphilophus_citrinellus
ENSSPUG00000003540	-	82	45.915	ENSAOCG00000022617	ptcd1	86	45.915	Amphiprion_ocellaris
ENSSPUG00000003540	-	86	46.468	ENSAOCG00000020741	-	85	46.468	Amphiprion_ocellaris
ENSSPUG00000003540	-	86	46.311	ENSAPEG00000022632	ptcd1	85	46.311	Amphiprion_percula
ENSSPUG00000003540	-	86	47.170	ENSATEG00000007016	ptcd1	81	48.926	Anabas_testudineus
ENSSPUG00000003540	-	85	64.865	ENSAPLG00000006862	-	97	63.963	Anas_platyrhynchos
ENSSPUG00000003540	-	92	61.836	ENSACAG00000012871	-	88	60.545	Anolis_carolinensis
ENSSPUG00000003540	-	97	53.112	ENSANAG00000035790	-	99	53.086	Aotus_nancymaae
ENSSPUG00000003540	-	85	46.494	ENSACLG00000002824	ptcd1	87	46.494	Astatotilapia_calliptera
ENSSPUG00000003540	-	87	48.780	ENSAMXG00000037292	ptcd1	91	48.480	Astyanax_mexicanus
ENSSPUG00000003540	-	91	54.599	ENSBTAG00000020440	-	82	54.453	Bos_taurus
ENSSPUG00000003540	-	97	54.408	ENSCJAG00000015815	-	97	53.857	Callithrix_jacchus
ENSSPUG00000003540	-	100	54.133	ENSCAFG00000015055	-	93	53.538	Canis_familiaris
ENSSPUG00000003540	-	99	54.072	ENSCAFG00020014480	-	93	53.538	Canis_lupus_dingo
ENSSPUG00000003540	-	89	55.338	ENSCHIG00000027000	-	91	55.489	Capra_hircus
ENSSPUG00000003540	-	84	58.019	ENSTSYG00000029495	-	87	56.610	Carlito_syrichta
ENSSPUG00000003540	-	91	54.948	ENSCAPG00000014660	-	99	54.786	Cavia_aperea
ENSSPUG00000003540	-	92	55.539	ENSCPOG00000001780	-	94	55.378	Cavia_porcellus
ENSSPUG00000003540	-	83	58.937	ENSCCAG00000034025	-	97	53.434	Cebus_capucinus
ENSSPUG00000003540	-	97	53.453	ENSCATG00000040859	-	96	53.686	Cercocebus_atys
ENSSPUG00000003540	-	89	55.723	ENSCLAG00000006354	-	94	54.046	Chinchilla_lanigera
ENSSPUG00000003540	-	92	53.139	ENSCSAG00000017794	-	95	53.382	Chlorocebus_sabaeus
ENSSPUG00000003540	-	99	68.506	ENSCPBG00000020866	-	99	68.237	Chrysemys_picta_bellii
ENSSPUG00000003540	-	75	31.228	ENSCING00000007717	-	91	30.877	Ciona_intestinalis
ENSSPUG00000003540	-	97	53.591	ENSCANG00000023441	-	96	53.825	Colobus_angolensis_palliatus
ENSSPUG00000003540	-	84	58.533	ENSCGRG00001023686	Ptcd1	86	58.162	Cricetulus_griseus_chok1gshd
ENSSPUG00000003540	-	90	55.869	ENSCGRG00000015031	Ptcd1	92	55.539	Cricetulus_griseus_crigri
ENSSPUG00000003540	-	87	42.451	ENSCSEG00000002378	ptcd1	88	42.232	Cynoglossus_semilaevis
ENSSPUG00000003540	-	83	47.805	ENSCVAG00000015826	ptcd1	83	47.720	Cyprinodon_variegatus
ENSSPUG00000003540	-	84	47.284	ENSCVAG00000003621	ptcd1	90	47.200	Cyprinodon_variegatus
ENSSPUG00000003540	-	85	48.830	ENSDARG00000076176	ptcd1	89	48.362	Danio_rerio
ENSSPUG00000003540	-	84	57.051	ENSDNOG00000009957	-	85	57.029	Dasypus_novemcinctus
ENSSPUG00000003540	-	83	59.709	ENSDORG00000000740	Ptcd1	92	57.164	Dipodomys_ordii
ENSSPUG00000003540	-	84	38.889	ENSEBUG00000014515	ptcd1	97	39.100	Eptatretus_burgeri
ENSSPUG00000003540	-	83	58.548	ENSEASG00005002480	-	97	53.878	Equus_asinus_asinus
ENSSPUG00000003540	-	83	58.710	ENSECAG00000016617	-	97	54.017	Equus_caballus
ENSSPUG00000003540	-	85	44.741	ENSELUG00000016517	ptcd1	85	45.110	Esox_lucius
ENSSPUG00000003540	-	86	58.970	ENSFCAG00000015069	-	87	58.814	Felis_catus
ENSSPUG00000003540	-	97	62.188	ENSFALG00000013803	-	99	62.050	Ficedula_albicollis
ENSSPUG00000003540	-	90	53.754	ENSFDAG00000006393	-	92	53.754	Fukomys_damarensis
ENSSPUG00000003540	-	78	44.578	ENSFHEG00000012491	ptcd1	95	44.923	Fundulus_heteroclitus
ENSSPUG00000003540	-	80	46.566	ENSGMOG00000007639	ptcd1	91	45.561	Gadus_morhua
ENSSPUG00000003540	-	85	65.931	ENSGALG00000004711	-	93	63.811	Gallus_gallus
ENSSPUG00000003540	-	89	44.428	ENSGAFG00000013175	ptcd1	94	43.182	Gambusia_affinis
ENSSPUG00000003540	-	89	45.468	ENSGACG00000016607	ptcd1	93	46.130	Gasterosteus_aculeatus
ENSSPUG00000003540	-	93	67.489	ENSGAGG00000021832	-	100	67.489	Gopherus_agassizii
ENSSPUG00000003540	-	84	58.202	ENSGGOG00000015123	-	99	52.653	Gorilla_gorilla
ENSSPUG00000003540	-	85	46.201	ENSHBUG00000018275	ptcd1	87	46.201	Haplochromis_burtoni
ENSSPUG00000003540	-	90	55.090	ENSHGLG00000017621	-	92	55.090	Heterocephalus_glaber_female
ENSSPUG00000003540	-	90	55.090	ENSHGLG00100007218	-	92	55.090	Heterocephalus_glaber_male
ENSSPUG00000003540	-	81	43.428	ENSHCOG00000010784	ptcd1	82	43.729	Hippocampus_comes
ENSSPUG00000003540	-	93	53.693	ENSSTOG00000001682	-	96	53.531	Ictidomys_tridecemlineatus
ENSSPUG00000003540	-	84	57.552	ENSJJAG00000000319	Ptcd1	88	57.393	Jaculus_jaculus
ENSSPUG00000003540	-	81	45.977	ENSKMAG00000008708	ptcd1	81	45.977	Kryptolebias_marmoratus
ENSSPUG00000003540	-	85	46.349	ENSLBEG00000008061	ptcd1	82	46.751	Labrus_bergylta
ENSSPUG00000003540	-	88	59.939	ENSLACG00000011172	ptcd1	89	59.939	Latimeria_chalumnae
ENSSPUG00000003540	-	91	53.333	ENSLOCG00000004833	ptcd1	96	53.724	Lepisosteus_oculatus
ENSSPUG00000003540	-	84	58.439	ENSLAFG00000002588	-	93	55.394	Loxodonta_africana
ENSSPUG00000003540	-	97	53.453	ENSMFAG00000041324	-	96	53.686	Macaca_fascicularis
ENSSPUG00000003540	-	97	53.591	ENSMMUG00000030408	-	96	53.825	Macaca_mulatta
ENSSPUG00000003540	-	97	53.964	ENSMNEG00000043786	-	96	53.547	Macaca_nemestrina
ENSSPUG00000003540	-	97	40.417	ENSMLEG00000031179	-	96	37.552	Mandrillus_leucophaeus
ENSSPUG00000003540	-	85	47.724	ENSMAMG00000007623	ptcd1	86	46.177	Mastacembelus_armatus
ENSSPUG00000003540	-	85	46.782	ENSMZEG00005012722	ptcd1	84	46.782	Maylandia_zebra
ENSSPUG00000003540	-	85	64.297	ENSMGAG00000004211	-	81	64.297	Meleagris_gallopavo
ENSSPUG00000003540	-	86	57.614	ENSMICG00000017428	-	88	57.387	Microcebus_murinus
ENSSPUG00000003540	-	84	46.850	ENSMMOG00000020243	ptcd1	91	46.624	Mola_mola
ENSSPUG00000003540	-	99	54.316	ENSMODG00000001350	-	99	54.183	Monodelphis_domestica
ENSSPUG00000003540	-	81	48.259	ENSMALG00000018442	ptcd1	80	47.769	Monopterus_albus
ENSSPUG00000003540	-	89	55.387	MGP_CAROLIEiJ_G0028011	Ptcd1	91	55.083	Mus_caroli
ENSSPUG00000003540	-	89	55.083	ENSMUSG00000029624	Ptcd1	91	55.235	Mus_musculus
ENSSPUG00000003540	-	93	54.215	MGP_PahariEiJ_G0024580	Ptcd1	96	54.070	Mus_pahari
ENSSPUG00000003540	-	89	54.932	MGP_SPRETEiJ_G0029012	Ptcd1	91	55.387	Mus_spretus
ENSSPUG00000003540	-	86	57.453	ENSMPUG00000016518	-	88	58.075	Mustela_putorius_furo
ENSSPUG00000003540	-	85	57.704	ENSMLUG00000010994	-	82	57.698	Myotis_lucifugus
ENSSPUG00000003540	-	92	45.428	ENSNBRG00000010079	ptcd1	91	46.936	Neolamprologus_brichardi
ENSSPUG00000003540	-	74	58.919	ENSNLEG00000011060	-	89	59.273	Nomascus_leucogenys
ENSSPUG00000003540	-	98	53.867	ENSMEUG00000006930	-	98	54.103	Notamacropus_eugenii
ENSSPUG00000003540	-	77	60.331	ENSOPRG00000013647	-	86	52.993	Ochotona_princeps
ENSSPUG00000003540	-	85	45.369	ENSONIG00000003168	ptcd1	99	45.369	Oreochromis_niloticus
ENSSPUG00000003540	-	86	52.739	ENSOANG00000007728	-	84	50.515	Ornithorhynchus_anatinus
ENSSPUG00000003540	-	82	58.738	ENSOCUG00000010584	-	83	58.173	Oryctolagus_cuniculus
ENSSPUG00000003540	-	80	48.074	ENSORLG00000009275	ptcd1	82	48.074	Oryzias_latipes
ENSSPUG00000003540	-	80	48.490	ENSORLG00020000988	ptcd1	82	48.490	Oryzias_latipes_hni
ENSSPUG00000003540	-	80	47.236	ENSORLG00015010557	ptcd1	82	47.236	Oryzias_latipes_hsok
ENSSPUG00000003540	-	88	45.161	ENSOMEG00000020627	ptcd1	88	46.240	Oryzias_melastigma
ENSSPUG00000003540	-	84	57.862	ENSOGAG00000010877	-	94	55.425	Otolemur_garnettii
ENSSPUG00000003540	-	90	52.090	ENSOARG00000018676	-	92	52.985	Ovis_aries
ENSSPUG00000003540	-	98	53.576	ENSPPAG00000036024	-	99	52.989	Pan_paniscus
ENSSPUG00000003540	-	85	59.055	ENSPPRG00000003478	-	88	58.898	Panthera_pardus
ENSSPUG00000003540	-	98	53.846	ENSPTRG00000019452	-	99	53.324	Pan_troglodytes
ENSSPUG00000003540	-	97	53.964	ENSPANG00000016730	-	96	53.408	Papio_anubis
ENSSPUG00000003540	-	88	51.672	ENSPKIG00000014215	ptcd1	91	50.000	Paramormyrops_kingsleyae
ENSSPUG00000003540	-	83	67.101	ENSPSIG00000011184	-	99	66.558	Pelodiscus_sinensis
ENSSPUG00000003540	-	72	38.148	ENSPMAG00000009667	ptcd1	100	37.963	Petromyzon_marinus
ENSSPUG00000003540	-	98	54.348	ENSPCIG00000024778	-	97	54.348	Phascolarctos_cinereus
ENSSPUG00000003540	-	89	43.910	ENSPFOG00000004458	ptcd1	88	43.862	Poecilia_formosa
ENSSPUG00000003540	-	89	44.060	ENSPLAG00000011051	ptcd1	88	44.511	Poecilia_latipinna
ENSSPUG00000003540	-	89	43.862	ENSPMEG00000020547	ptcd1	88	43.713	Poecilia_mexicana
ENSSPUG00000003540	-	90	44.428	ENSPREG00000000059	ptcd1	91	43.988	Poecilia_reticulata
ENSSPUG00000003540	-	90	55.620	ENSPPYG00000017377	-	99	55.310	Pongo_abelii
ENSSPUG00000003540	-	78	57.971	ENSPCAG00000001852	-	84	59.167	Procavia_capensis
ENSSPUG00000003540	-	84	56.804	ENSPCOG00000018596	-	98	52.510	Propithecus_coquereli
ENSSPUG00000003540	-	85	46.189	ENSPNYG00000019993	ptcd1	87	46.189	Pundamilia_nyererei
ENSSPUG00000003540	-	85	49.381	ENSPNAG00000014931	ptcd1	91	49.690	Pygocentrus_nattereri
ENSSPUG00000003540	-	82	58.728	ENSRNOG00000000987	Ptcd1	87	58.387	Rattus_norvegicus
ENSSPUG00000003540	-	97	53.867	ENSRBIG00000043393	-	96	54.103	Rhinopithecus_bieti
ENSSPUG00000003540	-	97	54.103	ENSRROG00000036420	-	96	54.103	Rhinopithecus_roxellana
ENSSPUG00000003540	-	97	54.069	ENSSBOG00000024114	-	97	53.655	Saimiri_boliviensis_boliviensis
ENSSPUG00000003540	-	99	52.840	ENSSHAG00000011376	-	99	53.262	Sarcophilus_harrisii
ENSSPUG00000003540	-	83	56.840	ENSSFOG00015007909	ptcd1	82	57.003	Scleropages_formosus
ENSSPUG00000003540	-	85	44.118	ENSSMAG00000000218	ptcd1	96	44.118	Scophthalmus_maximus
ENSSPUG00000003540	-	84	45.483	ENSSDUG00000015671	ptcd1	86	45.166	Seriola_dumerili
ENSSPUG00000003540	-	83	46.166	ENSSLDG00000014261	ptcd1	83	46.191	Seriola_lalandi_dorsalis
ENSSPUG00000003540	-	85	46.299	ENSSPAG00000011049	ptcd1	84	45.853	Stegastes_partitus
ENSSPUG00000003540	-	83	57.955	ENSSSCG00000007622	-	96	55.371	Sus_scrofa
ENSSPUG00000003540	-	84	65.865	ENSTGUG00000007563	-	98	65.705	Taeniopygia_guttata
ENSSPUG00000003540	-	81	46.777	ENSTRUG00000013471	ptcd1	83	45.840	Takifugu_rubripes
ENSSPUG00000003540	-	83	47.463	ENSTNIG00000008271	ptcd1	84	47.463	Tetraodon_nigroviridis
ENSSPUG00000003540	-	86	57.276	ENSTBEG00000011021	-	88	56.502	Tupaia_belangeri
ENSSPUG00000003540	-	91	53.061	ENSTTRG00000003006	-	93	52.770	Tursiops_truncatus
ENSSPUG00000003540	-	83	59.390	ENSUAMG00000008049	-	85	58.814	Ursus_americanus
ENSSPUG00000003540	-	99	54.133	ENSVVUG00000008836	-	99	53.672	Vulpes_vulpes
ENSSPUG00000003540	-	82	56.006	ENSXETG00000009891	ptcd1	87	55.662	Xenopus_tropicalis
ENSSPUG00000003540	-	89	44.947	ENSXMAG00000015540	ptcd1	88	45.098	Xiphophorus_maculatus