EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000003550 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 45176 bases
Position: chrQEPC01007203.1:83684-128859
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000004618	POP1	PF06978.11	5.5e-38	1	2
ENSSPUP00000004618	POP1	PF06978.11	5.5e-38	2	2
ENSSPUP00000004618	POPLD	PF08170.12	1.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000004899	-	2910	-	ENSSPUP00000004618	969 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000003550's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000003550's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000003550	-	100	59.826	ENSG00000104356	POP1	100	66.304	Homo_sapiens
ENSSPUG00000003550	-	100	45.897	ENSAPOG00000008198	pop1	100	45.559	Acanthochromis_polyacanthus
ENSSPUG00000003550	-	100	57.920	ENSAMEG00000000556	POP1	100	57.920	Ailuropoda_melanoleuca
ENSSPUG00000003550	-	100	44.851	ENSACIG00000004169	POP1	100	45.043	Amphilophus_citrinellus
ENSSPUG00000003550	-	100	45.790	ENSAOCG00000010991	pop1	100	45.825	Amphiprion_ocellaris
ENSSPUG00000003550	-	92	44.306	ENSAPEG00000007607	pop1	97	44.710	Amphiprion_percula
ENSSPUG00000003550	-	100	44.645	ENSATEG00000024814	POP1	100	44.550	Anabas_testudineus
ENSSPUG00000003550	-	92	66.453	ENSAPLG00000014418	POP1	100	66.239	Anas_platyrhynchos
ENSSPUG00000003550	-	100	60.234	ENSACAG00000016083	POP1	100	60.234	Anolis_carolinensis
ENSSPUG00000003550	-	87	67.797	ENSANAG00000026360	POP1	94	67.797	Aotus_nancymaae
ENSSPUG00000003550	-	100	45.646	ENSACLG00000010951	pop1	100	45.550	Astatotilapia_calliptera
ENSSPUG00000003550	-	100	45.557	ENSAMXG00000014483	POP1	100	45.089	Astyanax_mexicanus
ENSSPUG00000003550	-	100	57.703	ENSBTAG00000012596	POP1	100	58.732	Bos_taurus
ENSSPUG00000003550	-	100	59.148	ENSCJAG00000015567	POP1	100	58.778	Callithrix_jacchus
ENSSPUG00000003550	-	100	58.685	ENSCAFG00000000469	POP1	100	58.685	Canis_familiaris
ENSSPUG00000003550	-	100	58.350	ENSCAFG00020026765	POP1	100	58.350	Canis_lupus_dingo
ENSSPUG00000003550	-	100	58.869	ENSCHIG00000017066	POP1	100	58.511	Capra_hircus
ENSSPUG00000003550	-	100	58.124	ENSTSYG00000003097	POP1	100	58.140	Carlito_syrichta
ENSSPUG00000003550	-	100	57.549	ENSCAPG00000007251	POP1	100	57.143	Cavia_aperea
ENSSPUG00000003550	-	100	58.847	ENSCPOG00000002901	POP1	100	58.439	Cavia_porcellus
ENSSPUG00000003550	-	100	58.721	ENSCCAG00000018939	POP1	100	58.261	Cebus_capucinus
ENSSPUG00000003550	-	100	59.651	ENSCATG00000040916	POP1	100	59.554	Cercocebus_atys
ENSSPUG00000003550	-	100	57.854	ENSCLAG00000007208	POP1	97	57.576	Chinchilla_lanigera
ENSSPUG00000003550	-	90	61.315	ENSCSAG00000012340	POP1	99	61.315	Chlorocebus_sabaeus
ENSSPUG00000003550	-	95	55.759	ENSCHOG00000011432	POP1	99	55.204	Choloepus_hoffmanni
ENSSPUG00000003550	-	100	73.262	ENSCPBG00000006373	POP1	100	73.653	Chrysemys_picta_bellii
ENSSPUG00000003550	-	100	60.019	ENSCANG00000001647	POP1	100	59.748	Colobus_angolensis_palliatus
ENSSPUG00000003550	-	100	56.074	ENSCGRG00001017308	Pop1	100	56.360	Cricetulus_griseus_chok1gshd
ENSSPUG00000003550	-	100	52.144	ENSCGRG00000010824	Pop1	100	52.502	Cricetulus_griseus_crigri
ENSSPUG00000003550	-	100	43.954	ENSCSEG00000008737	POP1	100	44.050	Cynoglossus_semilaevis
ENSSPUG00000003550	-	100	46.442	ENSCVAG00000022248	pop1	100	46.442	Cyprinodon_variegatus
ENSSPUG00000003550	-	100	55.955	ENSDNOG00000019974	POP1	100	55.744	Dasypus_novemcinctus
ENSSPUG00000003550	-	100	51.163	ENSDORG00000015384	Pop1	100	52.039	Dipodomys_ordii
ENSSPUG00000003550	-	74	47.222	FBgn0026702	l(1)G0045	60	47.222	Drosophila_melanogaster
ENSSPUG00000003550	-	88	52.021	ENSETEG00000007839	POP1	88	52.197	Echinops_telfairi
ENSSPUG00000003550	-	50	37.778	ENSEBUG00000014694	-	99	37.576	Eptatretus_burgeri
ENSSPUG00000003550	-	100	58.869	ENSEASG00005003189	POP1	98	58.869	Equus_asinus_asinus
ENSSPUG00000003550	-	100	58.847	ENSECAG00000024236	POP1	100	58.847	Equus_caballus
ENSSPUG00000003550	-	66	56.209	ENSEEUG00000003050	-	66	55.240	Erinaceus_europaeus
ENSSPUG00000003550	-	100	46.169	ENSELUG00000003526	pop1	100	46.363	Esox_lucius
ENSSPUG00000003550	-	100	58.967	ENSFCAG00000002168	POP1	100	58.869	Felis_catus
ENSSPUG00000003550	-	100	63.240	ENSFALG00000005711	POP1	100	63.930	Ficedula_albicollis
ENSSPUG00000003550	-	100	58.212	ENSFDAG00000017068	POP1	100	57.838	Fukomys_damarensis
ENSSPUG00000003550	-	100	45.902	ENSFHEG00000019518	pop1	100	45.902	Fundulus_heteroclitus
ENSSPUG00000003550	-	92	44.283	ENSGMOG00000000659	POP1	97	44.283	Gadus_morhua
ENSSPUG00000003550	-	100	45.384	ENSGAFG00000019770	POP1	100	44.898	Gambusia_affinis
ENSSPUG00000003550	-	100	43.524	ENSGACG00000003499	pop1	100	43.810	Gasterosteus_aculeatus
ENSSPUG00000003550	-	100	71.024	ENSGAGG00000011737	POP1	98	71.415	Gopherus_agassizii
ENSSPUG00000003550	-	100	59.478	ENSGGOG00000003176	POP1	100	59.729	Gorilla_gorilla
ENSSPUG00000003550	-	100	45.576	ENSHBUG00000021583	pop1	100	45.480	Haplochromis_burtoni
ENSSPUG00000003550	-	100	57.640	ENSHGLG00000006029	POP1	100	57.640	Heterocephalus_glaber_female
ENSSPUG00000003550	-	100	57.640	ENSHGLG00100016879	POP1	100	57.640	Heterocephalus_glaber_male
ENSSPUG00000003550	-	90	46.882	ENSHCOG00000013888	pop1	96	46.409	Hippocampus_comes
ENSSPUG00000003550	-	100	42.791	ENSIPUG00000018336	pop1	100	40.758	Ictalurus_punctatus
ENSSPUG00000003550	-	100	60.603	ENSSTOG00000011455	POP1	97	60.311	Ictidomys_tridecemlineatus
ENSSPUG00000003550	-	100	56.934	ENSJJAG00000013325	Pop1	100	56.836	Jaculus_jaculus
ENSSPUG00000003550	-	100	45.894	ENSKMAG00000001346	POP1	100	46.512	Kryptolebias_marmoratus
ENSSPUG00000003550	-	89	46.238	ENSLBEG00000024457	POP1	95	45.989	Labrus_bergylta
ENSSPUG00000003550	-	92	56.548	ENSLACG00000012498	POP1	99	56.548	Latimeria_chalumnae
ENSSPUG00000003550	-	100	48.066	ENSLOCG00000009817	POP1	100	48.588	Lepisosteus_oculatus
ENSSPUG00000003550	-	100	59.728	ENSLAFG00000010770	POP1	100	59.436	Loxodonta_africana
ENSSPUG00000003550	-	100	59.748	ENSMFAG00000000347	POP1	100	59.651	Macaca_fascicularis
ENSSPUG00000003550	-	100	59.748	ENSMNEG00000036870	POP1	100	59.651	Macaca_nemestrina
ENSSPUG00000003550	-	100	59.748	ENSMLEG00000034986	POP1	100	59.651	Mandrillus_leucophaeus
ENSSPUG00000003550	-	100	46.878	ENSMAMG00000004040	pop1	100	47.087	Mastacembelus_armatus
ENSSPUG00000003550	-	100	45.671	ENSMZEG00005025448	pop1	100	45.576	Maylandia_zebra
ENSSPUG00000003550	-	100	62.237	ENSMGAG00000012167	POP1	100	62.224	Meleagris_gallopavo
ENSSPUG00000003550	-	100	57.445	ENSMAUG00000017537	Pop1	100	57.308	Mesocricetus_auratus
ENSSPUG00000003550	-	100	58.801	ENSMICG00000004361	POP1	100	59.263	Microcebus_murinus
ENSSPUG00000003550	-	100	56.019	ENSMOCG00000006356	Pop1	100	56.195	Microtus_ochrogaster
ENSSPUG00000003550	-	89	44.541	ENSMMOG00000018242	pop1	93	44.372	Mola_mola
ENSSPUG00000003550	-	100	59.266	ENSMODG00000006561	POP1	100	59.170	Monodelphis_domestica
ENSSPUG00000003550	-	100	46.570	ENSMALG00000012621	POP1	100	46.280	Monopterus_albus
ENSSPUG00000003550	-	100	55.977	MGP_CAROLIEiJ_G0019726	Pop1	100	55.545	Mus_caroli
ENSSPUG00000003550	-	100	55.879	ENSMUSG00000022325	Pop1	100	55.879	Mus_musculus
ENSSPUG00000003550	-	100	56.012	MGP_PahariEiJ_G0019735	Pop1	100	55.479	Mus_pahari
ENSSPUG00000003550	-	100	56.128	MGP_SPRETEiJ_G0020622	Pop1	100	55.696	Mus_spretus
ENSSPUG00000003550	-	100	58.955	ENSMPUG00000015250	POP1	100	58.818	Mustela_putorius_furo
ENSSPUG00000003550	-	100	55.674	ENSMLUG00000010204	POP1	100	55.717	Myotis_lucifugus
ENSSPUG00000003550	-	100	58.212	ENSNGAG00000001582	Pop1	100	58.212	Nannospalax_galili
ENSSPUG00000003550	-	100	42.995	ENSNBRG00000002356	pop1	100	42.940	Neolamprologus_brichardi
ENSSPUG00000003550	-	100	58.858	ENSNLEG00000002541	POP1	100	58.487	Nomascus_leucogenys
ENSSPUG00000003550	-	86	59.531	ENSMEUG00000003118	POP1	91	59.531	Notamacropus_eugenii
ENSSPUG00000003550	-	100	57.812	ENSOPRG00000007667	POP1	100	57.422	Ochotona_princeps
ENSSPUG00000003550	-	100	57.268	ENSODEG00000003984	POP1	100	57.478	Octodon_degus
ENSSPUG00000003550	-	100	46.220	ENSONIG00000016445	pop1	100	45.933	Oreochromis_niloticus
ENSSPUG00000003550	-	58	64.024	ENSOANG00000001278	-	94	67.066	Ornithorhynchus_anatinus
ENSSPUG00000003550	-	100	58.261	ENSOCUG00000017400	POP1	100	58.261	Oryctolagus_cuniculus
ENSSPUG00000003550	-	100	46.311	ENSORLG00000002839	pop1	100	45.930	Oryzias_latipes
ENSSPUG00000003550	-	90	46.971	ENSORLG00020022450	POP1	96	46.809	Oryzias_latipes_hni
ENSSPUG00000003550	-	100	46.602	ENSORLG00015012746	POP1	100	46.415	Oryzias_latipes_hsok
ENSSPUG00000003550	-	100	46.132	ENSOMEG00000006915	pop1	99	46.933	Oryzias_melastigma
ENSSPUG00000003550	-	100	58.454	ENSOGAG00000001466	POP1	100	58.955	Otolemur_garnettii
ENSSPUG00000003550	-	100	60.116	ENSPPAG00000018410	POP1	100	59.748	Pan_paniscus
ENSSPUG00000003550	-	100	59.259	ENSPPRG00000005002	POP1	100	59.064	Panthera_pardus
ENSSPUG00000003550	-	100	59.047	ENSPTIG00000016527	POP1	100	58.949	Panthera_tigris_altaica
ENSSPUG00000003550	-	100	60.116	ENSPTRG00000020458	POP1	100	59.748	Pan_troglodytes
ENSSPUG00000003550	-	100	59.748	ENSPANG00000009704	POP1	100	59.651	Papio_anubis
ENSSPUG00000003550	-	100	46.176	ENSPKIG00000016325	POP1	100	46.273	Paramormyrops_kingsleyae
ENSSPUG00000003550	-	100	69.493	ENSPSIG00000012343	POP1	100	69.883	Pelodiscus_sinensis
ENSSPUG00000003550	-	86	67.647	ENSPMGG00000022253	POP1	95	47.609	Periophthalmus_magnuspinnatus
ENSSPUG00000003550	-	99	55.258	ENSPEMG00000023633	Pop1	100	54.833	Peromyscus_maniculatus_bairdii
ENSSPUG00000003550	-	90	40.399	ENSPMAG00000003209	POP1	100	40.609	Petromyzon_marinus
ENSSPUG00000003550	-	100	58.301	ENSPCIG00000012216	POP1	100	58.494	Phascolarctos_cinereus
ENSSPUG00000003550	-	100	46.311	ENSPFOG00000012490	POP1	100	46.012	Poecilia_formosa
ENSSPUG00000003550	-	100	46.117	ENSPLAG00000004646	POP1	100	45.817	Poecilia_latipinna
ENSSPUG00000003550	-	100	46.505	ENSPMEG00000019592	POP1	100	46.109	Poecilia_mexicana
ENSSPUG00000003550	-	100	45.870	ENSPREG00000020951	POP1	100	45.825	Poecilia_reticulata
ENSSPUG00000003550	-	100	59.496	ENSPPYG00000018777	POP1	100	59.126	Pongo_abelii
ENSSPUG00000003550	-	100	56.780	ENSPCAG00000016662	POP1	100	56.585	Procavia_capensis
ENSSPUG00000003550	-	100	59.399	ENSPCOG00000019420	POP1	100	59.864	Propithecus_coquereli
ENSSPUG00000003550	-	100	58.333	ENSPVAG00000014468	POP1	100	58.382	Pteropus_vampyrus
ENSSPUG00000003550	-	89	46.187	ENSPNYG00000004476	pop1	95	46.336	Pundamilia_nyererei
ENSSPUG00000003550	-	100	43.825	ENSPNAG00000000265	pop1	100	41.783	Pygocentrus_nattereri
ENSSPUG00000003550	-	100	57.032	ENSRNOG00000005243	Pop1	100	56.573	Rattus_norvegicus
ENSSPUG00000003550	-	100	59.923	ENSRBIG00000007996	POP1	100	59.651	Rhinopithecus_bieti
ENSSPUG00000003550	-	100	59.923	ENSRROG00000012334	POP1	100	59.651	Rhinopithecus_roxellana
ENSSPUG00000003550	-	99	59.372	ENSSBOG00000020830	POP1	100	59.037	Saimiri_boliviensis_boliviensis
ENSSPUG00000003550	-	100	59.152	ENSSHAG00000000296	POP1	100	58.863	Sarcophilus_harrisii
ENSSPUG00000003550	-	100	45.543	ENSSFOG00015007429	pop1	99	45.543	Scleropages_formosus
ENSSPUG00000003550	-	92	46.242	ENSSMAG00000010467	POP1	98	47.182	Scophthalmus_maximus
ENSSPUG00000003550	-	100	45.964	ENSSDUG00000007817	POP1	100	46.249	Seriola_dumerili
ENSSPUG00000003550	-	100	46.023	ENSSLDG00000012565	POP1	100	46.388	Seriola_lalandi_dorsalis
ENSSPUG00000003550	-	90	47.987	ENSSPAG00000014955	pop1	100	45.294	Stegastes_partitus
ENSSPUG00000003550	-	100	58.537	ENSSSCG00000006078	POP1	100	57.812	Sus_scrofa
ENSSPUG00000003550	-	85	85.052	ENSTGUG00000012011	-	89	85.052	Taeniopygia_guttata
ENSSPUG00000003550	-	89	46.739	ENSTRUG00000010856	pop1	92	46.848	Takifugu_rubripes
ENSSPUG00000003550	-	91	46.842	ENSTNIG00000013297	pop1	98	46.744	Tetraodon_nigroviridis
ENSSPUG00000003550	-	95	58.603	ENSTBEG00000014214	POP1	99	57.820	Tupaia_belangeri
ENSSPUG00000003550	-	100	56.780	ENSTTRG00000016071	POP1	100	56.976	Tursiops_truncatus
ENSSPUG00000003550	-	99	57.466	ENSUAMG00000017309	POP1	100	57.681	Ursus_americanus
ENSSPUG00000003550	-	100	57.445	ENSUMAG00000016952	POP1	100	57.445	Ursus_maritimus
ENSSPUG00000003550	-	85	69.203	ENSVPAG00000008278	POP1	81	69.203	Vicugna_pacos
ENSSPUG00000003550	-	100	58.058	ENSVVUG00000010994	POP1	100	58.058	Vulpes_vulpes
ENSSPUG00000003550	-	100	40.953	ENSXCOG00000017043	POP1	100	40.665	Xiphophorus_couchianus
ENSSPUG00000003550	-	100	45.393	ENSXMAG00000002472	POP1	100	44.844	Xiphophorus_maculatus