EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000003726 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 61431 bases
Position: chrQEPC01013813.1:175128-236558
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000004885	ResIII	PF04851.15	9.1e-26	1	2
ENSSPUP00000004885	ResIII	PF04851.15	9.1e-26	2	2
ENSSPUP00000004885	DEAD	PF00270.29	2.6e-52	1	2
ENSSPUP00000004885	DEAD	PF00270.29	2.6e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000005193	-	7085	-	ENSSPUP00000004885	2136 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000003726's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000003726's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000003726	-	86	43.012	ENSSPUG00000001842	ASCC3	88	42.938

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000003726	-	100	97.519	ENSG00000144028	SNRNP200	100	97.519	Homo_sapiens
ENSSPUG00000003726	-	99	91.123	ENSAPOG00000010223	snrnp200	99	91.058	Acanthochromis_polyacanthus
ENSSPUG00000003726	-	100	97.566	ENSAMEG00000008996	SNRNP200	100	97.566	Ailuropoda_melanoleuca
ENSSPUG00000003726	-	97	90.257	ENSACIG00000001764	snrnp200	98	90.257	Amphilophus_citrinellus
ENSSPUG00000003726	-	99	91.029	ENSAOCG00000024593	snrnp200	100	90.150	Amphiprion_ocellaris
ENSSPUG00000003726	-	97	90.203	ENSAPEG00000012554	snrnp200	100	90.203	Amphiprion_percula
ENSSPUG00000003726	-	99	90.982	ENSATEG00000022522	snrnp200	99	90.918	Anabas_testudineus
ENSSPUG00000003726	-	99	97.737	ENSAPLG00000004313	SNRNP200	100	97.737	Anas_platyrhynchos
ENSSPUG00000003726	-	99	97.555	ENSACAG00000000434	SNRNP200	100	97.555	Anolis_carolinensis
ENSSPUG00000003726	-	100	93.044	ENSANAG00000036625	SNRNP200	100	93.044	Aotus_nancymaae
ENSSPUG00000003726	-	99	90.841	ENSACLG00000011188	snrnp200	99	90.777	Astatotilapia_calliptera
ENSSPUG00000003726	-	99	90.465	ENSAMXG00000005684	snrnp200	99	90.403	Astyanax_mexicanus
ENSSPUG00000003726	-	100	97.191	ENSBTAG00000000848	SNRNP200	100	97.191	Bos_taurus
ENSSPUG00000003726	-	100	97.519	ENSCJAG00000007514	SNRNP200	100	97.519	Callithrix_jacchus
ENSSPUG00000003726	-	100	96.780	ENSCAFG00020019979	SNRNP200	100	97.666	Canis_lupus_dingo
ENSSPUG00000003726	-	100	97.378	ENSCHIG00000020611	SNRNP200	100	97.378	Capra_hircus
ENSSPUG00000003726	-	100	97.566	ENSTSYG00000010467	SNRNP200	100	97.566	Carlito_syrichta
ENSSPUG00000003726	-	99	97.038	ENSCAPG00000017234	SNRNP200	99	97.038	Cavia_aperea
ENSSPUG00000003726	-	100	97.331	ENSCPOG00000006776	SNRNP200	100	97.331	Cavia_porcellus
ENSSPUG00000003726	-	100	97.519	ENSCCAG00000033962	SNRNP200	100	97.519	Cebus_capucinus
ENSSPUG00000003726	-	100	97.519	ENSCATG00000015790	SNRNP200	100	97.519	Cercocebus_atys
ENSSPUG00000003726	-	100	97.285	ENSCLAG00000004116	SNRNP200	100	97.285	Chinchilla_lanigera
ENSSPUG00000003726	-	100	97.566	ENSCSAG00000017369	SNRNP200	100	97.566	Chlorocebus_sabaeus
ENSSPUG00000003726	-	75	98.425	ENSCHOG00000012981	-	59	98.425	Choloepus_hoffmanni
ENSSPUG00000003726	-	100	97.943	ENSCPBG00000022571	SNRNP200	99	100.000	Chrysemys_picta_bellii
ENSSPUG00000003726	-	99	76.600	ENSCING00000005082	-	99	76.740	Ciona_intestinalis
ENSSPUG00000003726	-	100	92.060	ENSCANG00000033932	SNRNP200	100	97.362	Colobus_angolensis_palliatus
ENSSPUG00000003726	-	100	97.378	ENSCGRG00001022610	Snrnp200	100	97.378	Cricetulus_griseus_chok1gshd
ENSSPUG00000003726	-	100	96.821	ENSCGRG00000016472	Snrnp200	100	96.821	Cricetulus_griseus_crigri
ENSSPUG00000003726	-	100	90.028	ENSCSEG00000016399	snrnp200	100	90.028	Cynoglossus_semilaevis
ENSSPUG00000003726	-	100	85.955	ENSCVAG00000017631	snrnp200	99	85.955	Cyprinodon_variegatus
ENSSPUG00000003726	-	100	90.169	ENSDARG00000077536	snrnp200	99	90.169	Danio_rerio
ENSSPUG00000003726	-	100	96.114	ENSDNOG00000011227	SNRNP200	100	96.114	Dasypus_novemcinctus
ENSSPUG00000003726	-	100	94.857	ENSDORG00000005861	Snrnp200	100	94.857	Dipodomys_ordii
ENSSPUG00000003726	-	100	74.581	FBgn0263599	l(3)72Ab	99	74.488	Drosophila_melanogaster
ENSSPUG00000003726	-	95	97.674	ENSETEG00000000162	SNRNP200	74	97.674	Echinops_telfairi
ENSSPUG00000003726	-	83	81.256	ENSEBUG00000016524	snrnp200	95	81.256	Eptatretus_burgeri
ENSSPUG00000003726	-	100	96.457	ENSEASG00005001884	SNRNP200	100	96.457	Equus_asinus_asinus
ENSSPUG00000003726	-	100	97.566	ENSECAG00000019675	SNRNP200	100	97.566	Equus_caballus
ENSSPUG00000003726	-	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSSPUG00000003726	-	99	91.076	ENSELUG00000018948	snrnp200	99	91.011	Esox_lucius
ENSSPUG00000003726	-	100	97.612	ENSFCAG00000010699	SNRNP200	100	97.612	Felis_catus
ENSSPUG00000003726	-	93	91.964	ENSFALG00000001368	-	95	91.964	Ficedula_albicollis
ENSSPUG00000003726	-	100	97.285	ENSFDAG00000004683	SNRNP200	100	97.285	Fukomys_damarensis
ENSSPUG00000003726	-	100	88.296	ENSFHEG00000003786	snrnp200	99	88.296	Fundulus_heteroclitus
ENSSPUG00000003726	-	100	89.907	ENSGMOG00000004881	snrnp200	99	89.813	Gadus_morhua
ENSSPUG00000003726	-	100	88.483	ENSGAFG00000010807	snrnp200	99	88.483	Gambusia_affinis
ENSSPUG00000003726	-	100	90.191	ENSGACG00000011474	snrnp200	99	90.145	Gasterosteus_aculeatus
ENSSPUG00000003726	-	95	98.046	ENSGAGG00000016069	SNRNP200	99	98.046	Gopherus_agassizii
ENSSPUG00000003726	-	100	97.519	ENSGGOG00000005174	SNRNP200	100	97.519	Gorilla_gorilla
ENSSPUG00000003726	-	97	87.994	ENSHBUG00000011322	snrnp200	99	88.041	Haplochromis_burtoni
ENSSPUG00000003726	-	100	97.331	ENSHGLG00000006654	SNRNP200	100	97.331	Heterocephalus_glaber_female
ENSSPUG00000003726	-	100	97.331	ENSHGLG00100018594	SNRNP200	100	97.331	Heterocephalus_glaber_male
ENSSPUG00000003726	-	100	97.519	ENSSTOG00000016351	SNRNP200	100	97.519	Ictidomys_tridecemlineatus
ENSSPUG00000003726	-	100	97.285	ENSJJAG00000023659	Snrnp200	100	97.285	Jaculus_jaculus
ENSSPUG00000003726	-	100	87.961	ENSKMAG00000003665	snrnp200	99	87.961	Kryptolebias_marmoratus
ENSSPUG00000003726	-	100	90.730	ENSLBEG00000021585	snrnp200	99	90.730	Labrus_bergylta
ENSSPUG00000003726	-	82	94.664	ENSLACG00000000226	SNRNP200	99	94.664	Latimeria_chalumnae
ENSSPUG00000003726	-	100	92.228	ENSLOCG00000015198	snrnp200	99	92.228	Lepisosteus_oculatus
ENSSPUG00000003726	-	100	97.285	ENSLAFG00000015626	SNRNP200	100	97.285	Loxodonta_africana
ENSSPUG00000003726	-	100	97.472	ENSMFAG00000040174	SNRNP200	100	97.472	Macaca_fascicularis
ENSSPUG00000003726	-	100	97.472	ENSMMUG00000023261	SNRNP200	100	97.472	Macaca_mulatta
ENSSPUG00000003726	-	100	97.425	ENSMNEG00000032398	SNRNP200	100	97.425	Macaca_nemestrina
ENSSPUG00000003726	-	100	97.519	ENSMLEG00000019083	SNRNP200	100	97.519	Mandrillus_leucophaeus
ENSSPUG00000003726	-	100	90.407	ENSMAMG00000007851	snrnp200	99	90.360	Mastacembelus_armatus
ENSSPUG00000003726	-	97	87.994	ENSMZEG00005010787	snrnp200	99	88.041	Maylandia_zebra
ENSSPUG00000003726	-	97	97.339	ENSMGAG00000001831	SNRNP200	100	97.339	Meleagris_gallopavo
ENSSPUG00000003726	-	100	97.425	ENSMAUG00000011825	Snrnp200	100	97.425	Mesocricetus_auratus
ENSSPUG00000003726	-	100	97.566	ENSMICG00000004710	SNRNP200	100	97.566	Microcebus_murinus
ENSSPUG00000003726	-	100	95.037	ENSMOCG00000011814	Snrnp200	100	95.037	Microtus_ochrogaster
ENSSPUG00000003726	-	99	89.244	ENSMMOG00000014167	snrnp200	99	89.185	Mola_mola
ENSSPUG00000003726	-	100	97.331	ENSMODG00000008475	SNRNP200	100	97.331	Monodelphis_domestica
ENSSPUG00000003726	-	99	91.123	ENSMALG00000001973	snrnp200	99	91.058	Monopterus_albus
ENSSPUG00000003726	-	100	97.238	MGP_CAROLIEiJ_G0024250	Snrnp200	100	97.238	Mus_caroli
ENSSPUG00000003726	-	100	97.285	ENSMUSG00000003660	Snrnp200	100	97.285	Mus_musculus
ENSSPUG00000003726	-	100	97.331	MGP_PahariEiJ_G0025695	Snrnp200	100	97.331	Mus_pahari
ENSSPUG00000003726	-	100	97.285	MGP_SPRETEiJ_G0025170	Snrnp200	100	97.285	Mus_spretus
ENSSPUG00000003726	-	100	97.612	ENSMPUG00000008949	SNRNP200	100	97.612	Mustela_putorius_furo
ENSSPUG00000003726	-	100	96.961	ENSMLUG00000010493	SNRNP200	100	96.961	Myotis_lucifugus
ENSSPUG00000003726	-	100	93.352	ENSMLUG00000027511	-	100	93.352	Myotis_lucifugus
ENSSPUG00000003726	-	100	97.519	ENSNGAG00000021993	Snrnp200	100	97.519	Nannospalax_galili
ENSSPUG00000003726	-	90	90.493	ENSNBRG00000017960	snrnp200	98	90.493	Neolamprologus_brichardi
ENSSPUG00000003726	-	100	92.887	ENSNLEG00000000025	SNRNP200	100	93.026	Nomascus_leucogenys
ENSSPUG00000003726	-	100	100.000	ENSMEUG00000010532	SNRNP200	79	100.000	Notamacropus_eugenii
ENSSPUG00000003726	-	96	96.060	ENSOPRG00000015464	SNRNP200	100	93.633	Ochotona_princeps
ENSSPUG00000003726	-	100	97.331	ENSODEG00000008366	SNRNP200	100	97.331	Octodon_degus
ENSSPUG00000003726	-	99	90.747	ENSONIG00000010714	snrnp200	99	90.684	Oreochromis_niloticus
ENSSPUG00000003726	-	100	97.378	ENSOCUG00000009864	SNRNP200	100	97.378	Oryctolagus_cuniculus
ENSSPUG00000003726	-	100	90.637	ENSORLG00000012286	snrnp200	100	90.637	Oryzias_latipes
ENSSPUG00000003726	-	100	90.637	ENSORLG00020004648	snrnp200	100	90.637	Oryzias_latipes_hni
ENSSPUG00000003726	-	100	90.590	ENSORLG00015019114	snrnp200	100	90.699	Oryzias_latipes_hsok
ENSSPUG00000003726	-	99	90.747	ENSOMEG00000011834	snrnp200	99	90.684	Oryzias_melastigma
ENSSPUG00000003726	-	100	97.566	ENSOGAG00000006879	SNRNP200	100	97.566	Otolemur_garnettii
ENSSPUG00000003726	-	100	96.350	ENSOARG00000013949	SNRNP200	100	96.350	Ovis_aries
ENSSPUG00000003726	-	100	97.519	ENSPPAG00000041559	SNRNP200	100	97.519	Pan_paniscus
ENSSPUG00000003726	-	100	97.612	ENSPPRG00000004435	SNRNP200	100	97.612	Panthera_pardus
ENSSPUG00000003726	-	100	97.191	ENSPTIG00000006380	SNRNP200	100	97.191	Panthera_tigris_altaica
ENSSPUG00000003726	-	100	97.519	ENSPTRG00000012230	SNRNP200	100	97.519	Pan_troglodytes
ENSSPUG00000003726	-	100	97.472	ENSPANG00000006017	SNRNP200	100	97.472	Papio_anubis
ENSSPUG00000003726	-	100	91.058	ENSPKIG00000014762	snrnp200	99	91.058	Paramormyrops_kingsleyae
ENSSPUG00000003726	-	100	96.818	ENSPSIG00000008580	SNRNP200	100	96.818	Pelodiscus_sinensis
ENSSPUG00000003726	-	100	97.425	ENSPCIG00000023050	SNRNP200	100	97.425	Phascolarctos_cinereus
ENSSPUG00000003726	-	100	90.969	ENSPFOG00000015110	snrnp200	99	90.969	Poecilia_formosa
ENSSPUG00000003726	-	97	90.719	ENSPLAG00000006711	snrnp200	99	90.719	Poecilia_latipinna
ENSSPUG00000003726	-	97	90.610	ENSPMEG00000021166	snrnp200	99	90.610	Poecilia_mexicana
ENSSPUG00000003726	-	100	91.058	ENSPREG00000008875	snrnp200	99	91.058	Poecilia_reticulata
ENSSPUG00000003726	-	100	97.519	ENSPPYG00000012068	SNRNP200	100	97.519	Pongo_abelii
ENSSPUG00000003726	-	95	98.402	ENSPCAG00000008536	SNRNP200	86	98.402	Procavia_capensis
ENSSPUG00000003726	-	100	97.519	ENSPCOG00000024608	SNRNP200	100	97.519	Propithecus_coquereli
ENSSPUG00000003726	-	96	97.959	ENSPVAG00000005860	SNRNP200	92	97.959	Pteropus_vampyrus
ENSSPUG00000003726	-	99	86.370	ENSPNYG00000017476	snrnp200	99	86.321	Pundamilia_nyererei
ENSSPUG00000003726	-	100	85.815	ENSPNAG00000010998	snrnp200	99	85.815	Pygocentrus_nattereri
ENSSPUG00000003726	-	100	97.425	ENSRNOG00000012157	Snrnp200	100	97.425	Rattus_norvegicus
ENSSPUG00000003726	-	100	97.519	ENSRBIG00000044690	-	100	97.519	Rhinopithecus_bieti
ENSSPUG00000003726	-	100	97.519	ENSRROG00000037952	-	100	97.519	Rhinopithecus_roxellana
ENSSPUG00000003726	-	100	97.519	ENSSBOG00000035471	SNRNP200	100	97.519	Saimiri_boliviensis_boliviensis
ENSSPUG00000003726	-	97	97.339	ENSSHAG00000000758	SNRNP200	100	97.339	Sarcophilus_harrisii
ENSSPUG00000003726	-	99	91.310	ENSSFOG00015018826	snrnp200	99	91.245	Scleropages_formosus
ENSSPUG00000003726	-	99	90.747	ENSSMAG00000005463	snrnp200	99	90.684	Scophthalmus_maximus
ENSSPUG00000003726	-	99	90.982	ENSSDUG00000021410	snrnp200	99	90.918	Seriola_dumerili
ENSSPUG00000003726	-	99	90.888	ENSSLDG00000010884	snrnp200	99	90.824	Seriola_lalandi_dorsalis
ENSSPUG00000003726	-	95	97.587	ENSSARG00000010728	SNRNP200	96	97.587	Sorex_araneus
ENSSPUG00000003726	-	99	91.123	ENSSPAG00000001842	snrnp200	99	91.058	Stegastes_partitus
ENSSPUG00000003726	-	100	97.472	ENSSSCG00000008127	SNRNP200	100	97.472	Sus_scrofa
ENSSPUG00000003726	-	99	87.669	ENSTGUG00000014475	-	100	87.669	Taeniopygia_guttata
ENSSPUG00000003726	-	99	90.841	ENSTRUG00000001307	snrnp200	99	90.777	Takifugu_rubripes
ENSSPUG00000003726	-	100	86.260	ENSTNIG00000004320	snrnp200	100	79.533	Tetraodon_nigroviridis
ENSSPUG00000003726	-	82	98.122	ENSTBEG00000003329	-	67	98.122	Tupaia_belangeri
ENSSPUG00000003726	-	100	97.378	ENSTTRG00000004983	SNRNP200	100	97.378	Tursiops_truncatus
ENSSPUG00000003726	-	75	90.891	ENSUAMG00000008395	-	95	90.795	Ursus_americanus
ENSSPUG00000003726	-	100	97.612	ENSUMAG00000012385	SNRNP200	100	97.612	Ursus_maritimus
ENSSPUG00000003726	-	90	100.000	ENSVPAG00000006434	SNRNP200	69	100.000	Vicugna_pacos
ENSSPUG00000003726	-	100	97.384	ENSVVUG00000026247	SNRNP200	100	97.384	Vulpes_vulpes
ENSSPUG00000003726	-	100	94.296	ENSXETG00000001243	snrnp200	100	94.296	Xenopus_tropicalis
ENSSPUG00000003726	-	97	90.953	ENSXMAG00000002058	snrnp200	98	90.953	Xiphophorus_maculatus