EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000003865 (Gene tree)
Gene ID: -
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 22977 bases
Position: chrQEPC01005945.1:1655309-1678285
Accession: 28666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000005025	CMS1	PF14617.6	1.7e-33	1	1
ENSSPUP00000005025	DEAD	PF00270.29	5.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000005340	CMSS1-201	681	-	ENSSPUP00000005025	226 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000003865's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000003865's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000003865	CMSS1	100	69.027	ENSG00000184220	CMSS1	99	77.778	Homo_sapiens
ENSSPUG00000003865	CMSS1	89	61.881	ENSAPOG00000010604	cmss1	82	61.881	Acanthochromis_polyacanthus
ENSSPUG00000003865	CMSS1	100	70.044	ENSAMEG00000004092	CMSS1	88	70.044	Ailuropoda_melanoleuca
ENSSPUG00000003865	CMSS1	89	53.960	ENSACIG00000021854	cmss1	75	53.960	Amphilophus_citrinellus
ENSSPUG00000003865	CMSS1	89	61.386	ENSAOCG00000013361	cmss1	77	59.459	Amphiprion_ocellaris
ENSSPUG00000003865	CMSS1	89	61.386	ENSAPEG00000005829	cmss1	77	60.090	Amphiprion_percula
ENSSPUG00000003865	CMSS1	99	61.739	ENSATEG00000008209	cmss1	79	61.039	Anabas_testudineus
ENSSPUG00000003865	CMSS1	100	80.617	ENSAPLG00000010542	CMSS1	99	80.617	Anas_platyrhynchos
ENSSPUG00000003865	CMSS1	89	81.188	ENSACAG00000011065	CMSS1	74	81.188	Anolis_carolinensis
ENSSPUG00000003865	CMSS1	100	70.354	ENSANAG00000023565	CMSS1	86	70.354	Aotus_nancymaae
ENSSPUG00000003865	CMSS1	89	60.891	ENSACLG00000027294	cmss1	69	60.891	Astatotilapia_calliptera
ENSSPUG00000003865	CMSS1	88	58.500	ENSAMXG00000002046	cmss1	69	58.416	Astyanax_mexicanus
ENSSPUG00000003865	CMSS1	100	69.027	ENSBTAG00000013663	CMSS1	82	69.027	Bos_taurus
ENSSPUG00000003865	CMSS1	100	71.239	ENSCJAG00000000610	CMSS1	86	71.239	Callithrix_jacchus
ENSSPUG00000003865	CMSS1	100	70.796	ENSCAFG00000009230	CMSS1	82	70.796	Canis_familiaris
ENSSPUG00000003865	CMSS1	89	68.812	ENSCAFG00020024156	-	62	69.307	Canis_lupus_dingo
ENSSPUG00000003865	CMSS1	100	70.796	ENSCAFG00020009464	-	82	70.796	Canis_lupus_dingo
ENSSPUG00000003865	CMSS1	100	69.027	ENSCHIG00000013003	CMSS1	82	69.027	Capra_hircus
ENSSPUG00000003865	CMSS1	100	67.699	ENSTSYG00000009266	CMSS1	87	67.699	Carlito_syrichta
ENSSPUG00000003865	CMSS1	99	57.399	ENSCAPG00000013584	CMSS1	88	63.298	Cavia_aperea
ENSSPUG00000003865	CMSS1	100	70.354	ENSCPOG00000014680	CMSS1	81	70.354	Cavia_porcellus
ENSSPUG00000003865	CMSS1	100	70.354	ENSCCAG00000034685	CMSS1	86	70.354	Cebus_capucinus
ENSSPUG00000003865	CMSS1	100	69.469	ENSCATG00000031980	CMSS1	87	69.469	Cercocebus_atys
ENSSPUG00000003865	CMSS1	100	70.796	ENSCLAG00000011241	CMSS1	97	70.796	Chinchilla_lanigera
ENSSPUG00000003865	CMSS1	100	69.469	ENSCSAG00000006024	CMSS1	92	69.469	Chlorocebus_sabaeus
ENSSPUG00000003865	CMSS1	100	51.770	ENSCHOG00000012098	CMSS1	82	51.770	Choloepus_hoffmanni
ENSSPUG00000003865	CMSS1	82	43.316	ENSCING00000014848	-	99	43.316	Ciona_intestinalis
ENSSPUG00000003865	CMSS1	55	43.651	ENSCSAVG00000002309	-	99	43.651	Ciona_savignyi
ENSSPUG00000003865	CMSS1	100	69.027	ENSCANG00000031337	CMSS1	87	69.027	Colobus_angolensis_palliatus
ENSSPUG00000003865	CMSS1	100	69.469	ENSCGRG00001014305	Cmss1	81	69.469	Cricetulus_griseus_chok1gshd
ENSSPUG00000003865	CMSS1	100	69.027	ENSCGRG00000006722	Cmss1	88	69.027	Cricetulus_griseus_crigri
ENSSPUG00000003865	CMSS1	89	62.376	ENSCSEG00000004958	cmss1	69	62.376	Cynoglossus_semilaevis
ENSSPUG00000003865	CMSS1	89	62.871	ENSCVAG00000005039	cmss1	70	62.871	Cyprinodon_variegatus
ENSSPUG00000003865	CMSS1	100	52.340	ENSDARG00000112579	cmss1	79	53.247	Danio_rerio
ENSSPUG00000003865	CMSS1	100	70.796	ENSDNOG00000040418	CMSS1	82	70.796	Dasypus_novemcinctus
ENSSPUG00000003865	CMSS1	100	69.912	ENSDORG00000010461	Cmss1	81	69.912	Dipodomys_ordii
ENSSPUG00000003865	CMSS1	60	51.471	ENSEBUG00000002156	-	99	51.471	Eptatretus_burgeri
ENSSPUG00000003865	CMSS1	100	69.027	ENSEASG00005010966	CMSS1	92	70.792	Equus_asinus_asinus
ENSSPUG00000003865	CMSS1	100	68.142	ENSECAG00000015662	CMSS1	99	67.699	Equus_caballus
ENSSPUG00000003865	CMSS1	100	47.788	ENSEEUG00000007624	-	81	48.230	Erinaceus_europaeus
ENSSPUG00000003865	CMSS1	89	60.891	ENSELUG00000019459	cmss1	75	58.850	Esox_lucius
ENSSPUG00000003865	CMSS1	100	71.239	ENSFCAG00000044577	CMSS1	81	71.239	Felis_catus
ENSSPUG00000003865	CMSS1	100	78.319	ENSFALG00000005816	CMSS1	95	78.319	Ficedula_albicollis
ENSSPUG00000003865	CMSS1	100	68.142	ENSFDAG00000012577	CMSS1	99	68.142	Fukomys_damarensis
ENSSPUG00000003865	CMSS1	100	56.522	ENSFHEG00000012008	cmss1	95	55.652	Fundulus_heteroclitus
ENSSPUG00000003865	CMSS1	98	60.360	ENSGMOG00000016729	cmss1	80	60.360	Gadus_morhua
ENSSPUG00000003865	CMSS1	100	81.416	ENSGALG00000015267	CMSS1	87	81.416	Gallus_gallus
ENSSPUG00000003865	CMSS1	92	60.870	ENSGAFG00000021217	cmss1	77	60.891	Gambusia_affinis
ENSSPUG00000003865	CMSS1	96	58.257	ENSGACG00000002798	cmss1	80	57.658	Gasterosteus_aculeatus
ENSSPUG00000003865	CMSS1	100	82.301	ENSGAGG00000019861	CMSS1	88	82.301	Gopherus_agassizii
ENSSPUG00000003865	CMSS1	100	69.912	ENSGGOG00000014125	CMSS1	87	69.912	Gorilla_gorilla
ENSSPUG00000003865	CMSS1	89	60.891	ENSHBUG00000008431	cmss1	71	60.891	Haplochromis_burtoni
ENSSPUG00000003865	CMSS1	100	70.796	ENSHGLG00000019481	CMSS1	92	70.796	Heterocephalus_glaber_female
ENSSPUG00000003865	CMSS1	100	70.796	ENSHGLG00100010314	CMSS1	91	70.796	Heterocephalus_glaber_male
ENSSPUG00000003865	CMSS1	99	59.735	ENSHCOG00000003222	cmss1	77	59.735	Hippocampus_comes
ENSSPUG00000003865	CMSS1	98	59.276	ENSIPUG00000011591	cmss1	76	59.545	Ictalurus_punctatus
ENSSPUG00000003865	CMSS1	100	69.912	ENSSTOG00000019366	CMSS1	81	69.912	Ictidomys_tridecemlineatus
ENSSPUG00000003865	CMSS1	100	69.469	ENSJJAG00000014894	Cmss1	90	71.287	Jaculus_jaculus
ENSSPUG00000003865	CMSS1	89	58.416	ENSKMAG00000002390	cmss1	81	58.416	Kryptolebias_marmoratus
ENSSPUG00000003865	CMSS1	98	50.622	ENSLBEG00000006298	cmss1	83	57.143	Labrus_bergylta
ENSSPUG00000003865	CMSS1	100	67.544	ENSLACG00000009293	CMSS1	99	68.421	Latimeria_chalumnae
ENSSPUG00000003865	CMSS1	100	59.031	ENSLOCG00000009391	cmss1	80	58.590	Lepisosteus_oculatus
ENSSPUG00000003865	CMSS1	100	69.027	ENSLAFG00000017509	CMSS1	99	69.027	Loxodonta_africana
ENSSPUG00000003865	CMSS1	100	69.912	ENSMFAG00000045006	CMSS1	87	69.912	Macaca_fascicularis
ENSSPUG00000003865	CMSS1	100	69.469	ENSMMUG00000002939	CMSS1	96	69.444	Macaca_mulatta
ENSSPUG00000003865	CMSS1	100	69.912	ENSMNEG00000031315	CMSS1	87	69.912	Macaca_nemestrina
ENSSPUG00000003865	CMSS1	100	69.912	ENSMLEG00000033660	CMSS1	87	69.912	Mandrillus_leucophaeus
ENSSPUG00000003865	CMSS1	89	63.366	ENSMAMG00000017176	cmss1	76	63.014	Mastacembelus_armatus
ENSSPUG00000003865	CMSS1	89	60.891	ENSMZEG00005021886	cmss1	69	60.891	Maylandia_zebra
ENSSPUG00000003865	CMSS1	100	80.973	ENSMGAG00000014360	CMSS1	99	80.973	Meleagris_gallopavo
ENSSPUG00000003865	CMSS1	100	45.133	ENSMAUG00000020609	Cmss1	77	65.741	Mesocricetus_auratus
ENSSPUG00000003865	CMSS1	100	69.469	ENSMICG00000048977	CMSS1	87	69.469	Microcebus_murinus
ENSSPUG00000003865	CMSS1	100	67.699	ENSMOCG00000021937	Cmss1	82	67.699	Microtus_ochrogaster
ENSSPUG00000003865	CMSS1	89	61.386	ENSMMOG00000019794	cmss1	84	61.386	Mola_mola
ENSSPUG00000003865	CMSS1	100	73.894	ENSMODG00000002275	CMSS1	85	73.894	Monodelphis_domestica
ENSSPUG00000003865	CMSS1	98	61.712	ENSMALG00000004250	cmss1	76	61.712	Monopterus_albus
ENSSPUG00000003865	CMSS1	100	68.722	MGP_CAROLIEiJ_G0020824	Cmss1	82	68.722	Mus_caroli
ENSSPUG00000003865	CMSS1	100	68.722	ENSMUSG00000022748	Cmss1	82	68.722	Mus_musculus
ENSSPUG00000003865	CMSS1	100	68.282	MGP_PahariEiJ_G0016524	Cmss1	82	68.282	Mus_pahari
ENSSPUG00000003865	CMSS1	100	68.722	MGP_SPRETEiJ_G0021724	Cmss1	82	68.722	Mus_spretus
ENSSPUG00000003865	CMSS1	99	70.222	ENSMPUG00000011324	CMSS1	87	70.222	Mustela_putorius_furo
ENSSPUG00000003865	CMSS1	100	69.737	ENSMLUG00000001131	CMSS1	87	69.737	Myotis_lucifugus
ENSSPUG00000003865	CMSS1	100	68.584	ENSNGAG00000020316	Cmss1	81	68.584	Nannospalax_galili
ENSSPUG00000003865	CMSS1	89	60.891	ENSNBRG00000003095	cmss1	69	60.891	Neolamprologus_brichardi
ENSSPUG00000003865	CMSS1	100	69.912	ENSNLEG00000034172	CMSS1	87	69.912	Nomascus_leucogenys
ENSSPUG00000003865	CMSS1	100	63.717	ENSMEUG00000014505	CMSS1	99	63.717	Notamacropus_eugenii
ENSSPUG00000003865	CMSS1	100	70.354	ENSOPRG00000002986	CMSS1	81	70.354	Ochotona_princeps
ENSSPUG00000003865	CMSS1	97	60.274	ENSODEG00000009446	-	85	60.274	Octodon_degus
ENSSPUG00000003865	CMSS1	100	59.292	ENSODEG00000001853	-	80	59.292	Octodon_degus
ENSSPUG00000003865	CMSS1	100	70.796	ENSODEG00000005226	-	81	70.796	Octodon_degus
ENSSPUG00000003865	CMSS1	100	68.584	ENSODEG00000003558	-	83	68.584	Octodon_degus
ENSSPUG00000003865	CMSS1	89	61.386	ENSONIG00000006678	cmss1	77	61.386	Oreochromis_niloticus
ENSSPUG00000003865	CMSS1	100	78.319	ENSOANG00000007529	CMSS1	99	76.957	Ornithorhynchus_anatinus
ENSSPUG00000003865	CMSS1	100	69.912	ENSOCUG00000025366	CMSS1	82	69.912	Oryctolagus_cuniculus
ENSSPUG00000003865	CMSS1	89	62.376	ENSORLG00000020340	cmss1	71	62.376	Oryzias_latipes
ENSSPUG00000003865	CMSS1	97	52.968	ENSORLG00020012235	cmss1	93	52.968	Oryzias_latipes_hni
ENSSPUG00000003865	CMSS1	89	54.950	ENSORLG00015015551	cmss1	75	54.950	Oryzias_latipes_hsok
ENSSPUG00000003865	CMSS1	89	62.376	ENSOMEG00000012555	cmss1	70	62.376	Oryzias_melastigma
ENSSPUG00000003865	CMSS1	100	69.027	ENSOGAG00000002045	CMSS1	99	69.027	Otolemur_garnettii
ENSSPUG00000003865	CMSS1	100	69.163	ENSOARG00000017899	CMSS1	78	69.163	Ovis_aries
ENSSPUG00000003865	CMSS1	100	69.912	ENSPPAG00000038515	CMSS1	83	69.912	Pan_paniscus
ENSSPUG00000003865	CMSS1	100	71.239	ENSPPRG00000016767	CMSS1	81	71.239	Panthera_pardus
ENSSPUG00000003865	CMSS1	100	70.796	ENSPTIG00000018274	CMSS1	81	70.796	Panthera_tigris_altaica
ENSSPUG00000003865	CMSS1	100	69.469	ENSPTRG00000015157	CMSS1	92	69.469	Pan_troglodytes
ENSSPUG00000003865	CMSS1	100	69.469	ENSPANG00000019980	CMSS1	90	69.469	Papio_anubis
ENSSPUG00000003865	CMSS1	100	64.783	ENSPKIG00000012609	cmss1	85	64.348	Paramormyrops_kingsleyae
ENSSPUG00000003865	CMSS1	100	87.168	ENSPSIG00000003849	CMSS1	99	87.168	Pelodiscus_sinensis
ENSSPUG00000003865	CMSS1	98	56.388	ENSPMGG00000010286	cmss1	97	57.522	Periophthalmus_magnuspinnatus
ENSSPUG00000003865	CMSS1	100	68.142	ENSPEMG00000016384	Cmss1	81	68.142	Peromyscus_maniculatus_bairdii
ENSSPUG00000003865	CMSS1	90	54.902	ENSPMAG00000001146	cmss1	99	55.446	Petromyzon_marinus
ENSSPUG00000003865	CMSS1	100	75.664	ENSPCIG00000015656	CMSS1	86	75.664	Phascolarctos_cinereus
ENSSPUG00000003865	CMSS1	89	61.386	ENSPFOG00000016849	cmss1	71	61.386	Poecilia_formosa
ENSSPUG00000003865	CMSS1	89	60.891	ENSPLAG00000008323	cmss1	71	60.891	Poecilia_latipinna
ENSSPUG00000003865	CMSS1	89	61.386	ENSPMEG00000021020	cmss1	70	61.386	Poecilia_mexicana
ENSSPUG00000003865	CMSS1	89	60.396	ENSPREG00000007618	cmss1	69	60.396	Poecilia_reticulata
ENSSPUG00000003865	CMSS1	100	70.796	ENSPPYG00000013606	CMSS1	83	70.796	Pongo_abelii
ENSSPUG00000003865	CMSS1	100	69.469	ENSPCOG00000020035	CMSS1	87	69.469	Propithecus_coquereli
ENSSPUG00000003865	CMSS1	100	59.292	ENSPVAG00000017031	CMSS1	81	59.292	Pteropus_vampyrus
ENSSPUG00000003865	CMSS1	78	64.773	ENSPNYG00000013428	cmss1	65	64.773	Pundamilia_nyererei
ENSSPUG00000003865	CMSS1	100	57.826	ENSPNAG00000007912	cmss1	78	58.696	Pygocentrus_nattereri
ENSSPUG00000003865	CMSS1	100	68.282	ENSRNOG00000027888	Cmss1	88	68.282	Rattus_norvegicus
ENSSPUG00000003865	CMSS1	100	69.027	ENSRBIG00000037931	CMSS1	87	69.027	Rhinopithecus_bieti
ENSSPUG00000003865	CMSS1	100	69.027	ENSRROG00000042910	CMSS1	87	69.027	Rhinopithecus_roxellana
ENSSPUG00000003865	CMSS1	100	69.027	ENSSBOG00000030980	CMSS1	86	69.027	Saimiri_boliviensis_boliviensis
ENSSPUG00000003865	CMSS1	100	74.779	ENSSHAG00000009321	CMSS1	89	74.779	Sarcophilus_harrisii
ENSSPUG00000003865	CMSS1	100	61.739	ENSSFOG00015001509	cmss1	79	61.739	Scleropages_formosus
ENSSPUG00000003865	CMSS1	89	62.871	ENSSMAG00000001653	cmss1	69	62.871	Scophthalmus_maximus
ENSSPUG00000003865	CMSS1	89	61.881	ENSSDUG00000007719	cmss1	80	60.262	Seriola_dumerili
ENSSPUG00000003865	CMSS1	92	61.353	ENSSLDG00000012300	cmss1	75	60.000	Seriola_lalandi_dorsalis
ENSSPUG00000003865	CMSS1	100	57.522	ENSSARG00000003584	CMSS1	81	57.522	Sorex_araneus
ENSSPUG00000003865	CMSS1	92	62.802	ENSSPAG00000019182	cmss1	63	63.366	Stegastes_partitus
ENSSPUG00000003865	CMSS1	100	69.027	ENSSSCG00000011970	CMSS1	81	69.027	Sus_scrofa
ENSSPUG00000003865	CMSS1	100	79.204	ENSTGUG00000013635	CMSS1	99	79.204	Taeniopygia_guttata
ENSSPUG00000003865	CMSS1	89	61.386	ENSTRUG00000015265	cmss1	72	61.386	Takifugu_rubripes
ENSSPUG00000003865	CMSS1	89	54.950	ENSTNIG00000002880	cmss1	83	52.632	Tetraodon_nigroviridis
ENSSPUG00000003865	CMSS1	100	47.345	ENSTBEG00000016722	CMSS1	81	47.345	Tupaia_belangeri
ENSSPUG00000003865	CMSS1	100	66.372	ENSTTRG00000001562	CMSS1	81	66.372	Tursiops_truncatus
ENSSPUG00000003865	CMSS1	100	71.239	ENSUAMG00000024209	CMSS1	99	71.041	Ursus_americanus
ENSSPUG00000003865	CMSS1	100	70.354	ENSUMAG00000001983	CMSS1	87	70.354	Ursus_maritimus
ENSSPUG00000003865	CMSS1	100	57.080	ENSVPAG00000000263	CMSS1	57	74.375	Vicugna_pacos
ENSSPUG00000003865	CMSS1	100	71.239	ENSVVUG00000021647	-	92	71.239	Vulpes_vulpes
ENSSPUG00000003865	CMSS1	89	72.277	ENSVVUG00000007776	-	80	72.277	Vulpes_vulpes
ENSSPUG00000003865	CMSS1	97	64.865	ENSXETG00000011858	cmss1	78	66.055	Xenopus_tropicalis
ENSSPUG00000003865	CMSS1	92	60.577	ENSXCOG00000018724	cmss1	69	60.891	Xiphophorus_couchianus
ENSSPUG00000003865	CMSS1	92	60.577	ENSXMAG00000011243	cmss1	76	60.891	Xiphophorus_maculatus