EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000003872 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 1575 bases
Position: chrQEPC01012478.1:510069-511643
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000005012	RRM_1	PF00076.22	1.4e-15	1	2
ENSSPUP00000005012	RRM_1	PF00076.22	1.4e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000005327	-	1482	-	ENSSPUP00000005012	493 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000003872's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000003872's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000003872	-	93	88.259	ENSSPUG00000008539	-	93	90.515

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000003872	-	93	66.333	ENSG00000185946	RNPC3	96	69.630	Homo_sapiens
ENSSPUG00000003872	-	92	53.893	ENSAPOG00000017371	rnpc3	97	54.098	Acanthochromis_polyacanthus
ENSSPUG00000003872	-	93	66.667	ENSAMEG00000001694	RNPC3	96	66.667	Ailuropoda_melanoleuca
ENSSPUG00000003872	-	92	51.205	ENSACIG00000021043	rnpc3	97	51.205	Amphilophus_citrinellus
ENSSPUG00000003872	-	92	52.727	ENSAOCG00000014052	rnpc3	95	52.929	Amphiprion_ocellaris
ENSSPUG00000003872	-	92	52.525	ENSAPEG00000008739	rnpc3	95	52.727	Amphiprion_percula
ENSSPUG00000003872	-	92	51.098	ENSATEG00000021263	rnpc3	97	51.098	Anabas_testudineus
ENSSPUG00000003872	-	84	74.107	ENSAPLG00000015605	RNPC3	99	74.330	Anas_platyrhynchos
ENSSPUG00000003872	-	91	71.014	ENSACAG00000002029	RNPC3	97	67.814	Anolis_carolinensis
ENSSPUG00000003872	-	92	65.927	ENSANAG00000019950	RNPC3	96	65.400	Aotus_nancymaae
ENSSPUG00000003872	-	90	53.992	ENSACLG00000014702	rnpc3	95	53.992	Astatotilapia_calliptera
ENSSPUG00000003872	-	93	65.538	ENSBTAG00000019091	RNPC3	96	65.538	Bos_taurus
ENSSPUG00000003872	-	92	64.718	ENSCJAG00000035686	RNPC3	96	64.800	Callithrix_jacchus
ENSSPUG00000003872	-	93	65.800	ENSCAFG00000019972	RNPC3	96	65.800	Canis_familiaris
ENSSPUG00000003872	-	93	65.800	ENSCAFG00020011300	RNPC3	96	65.800	Canis_lupus_dingo
ENSSPUG00000003872	-	93	65.209	ENSCHIG00000020361	RNPC3	96	65.209	Capra_hircus
ENSSPUG00000003872	-	93	64.600	ENSTSYG00000030256	RNPC3	96	64.600	Carlito_syrichta
ENSSPUG00000003872	-	81	57.306	ENSCAPG00000013600	RNPC3	97	57.077	Cavia_aperea
ENSSPUG00000003872	-	92	65.323	ENSCPOG00000031638	RNPC3	96	65.000	Cavia_porcellus
ENSSPUG00000003872	-	92	65.524	ENSCCAG00000024301	RNPC3	96	65.200	Cebus_capucinus
ENSSPUG00000003872	-	93	65.731	ENSCATG00000002086	RNPC3	96	65.731	Cercocebus_atys
ENSSPUG00000003872	-	92	65.051	ENSCLAG00000005169	RNPC3	96	64.529	Chinchilla_lanigera
ENSSPUG00000003872	-	93	65.531	ENSCSAG00000001519	RNPC3	96	66.132	Chlorocebus_sabaeus
ENSSPUG00000003872	-	92	74.442	ENSCPBG00000028311	RNPC3	96	75.051	Chrysemys_picta_bellii
ENSSPUG00000003872	-	93	65.331	ENSCANG00000031444	RNPC3	96	65.331	Colobus_angolensis_palliatus
ENSSPUG00000003872	-	92	65.377	ENSCGRG00001019276	Rnpc3	95	64.837	Cricetulus_griseus_chok1gshd
ENSSPUG00000003872	-	84	64.459	ENSCGRG00000000053	Rnpc3	100	64.018	Cricetulus_griseus_crigri
ENSSPUG00000003872	-	92	51.139	ENSCSEG00000013475	rnpc3	96	50.725	Cynoglossus_semilaevis
ENSSPUG00000003872	-	92	52.104	ENSCVAG00000002645	rnpc3	97	51.904	Cyprinodon_variegatus
ENSSPUG00000003872	-	93	52.600	ENSDARG00000011247	rnpc3	91	64.327	Danio_rerio
ENSSPUG00000003872	-	92	66.869	ENSDNOG00000047498	-	95	66.667	Dasypus_novemcinctus
ENSSPUG00000003872	-	92	67.273	ENSDNOG00000044555	-	95	67.071	Dasypus_novemcinctus
ENSSPUG00000003872	-	93	65.060	ENSDORG00000027343	Rnpc3	96	65.060	Dipodomys_ordii
ENSSPUG00000003872	-	92	46.047	ENSEBUG00000002068	rnpc3	66	61.006	Eptatretus_burgeri
ENSSPUG00000003872	-	92	66.129	ENSEASG00005015957	RNPC3	96	65.800	Equus_asinus_asinus
ENSSPUG00000003872	-	92	66.129	ENSECAG00000021148	RNPC3	96	65.800	Equus_caballus
ENSSPUG00000003872	-	88	61.818	ENSELUG00000002264	rnpc3	82	61.818	Esox_lucius
ENSSPUG00000003872	-	93	65.800	ENSFCAG00000024312	RNPC3	96	65.800	Felis_catus
ENSSPUG00000003872	-	84	72.768	ENSFALG00000002580	RNPC3	99	72.768	Ficedula_albicollis
ENSSPUG00000003872	-	92	66.260	ENSFDAG00000019948	RNPC3	96	65.800	Fukomys_damarensis
ENSSPUG00000003872	-	92	46.733	ENSFHEG00000020647	rnpc3	96	50.722	Fundulus_heteroclitus
ENSSPUG00000003872	-	93	51.959	ENSGMOG00000019213	rnpc3	96	52.174	Gadus_morhua
ENSSPUG00000003872	-	93	72.470	ENSGALG00000005162	RNPC3	90	72.470	Gallus_gallus
ENSSPUG00000003872	-	92	52.305	ENSGAFG00000017236	rnpc3	97	51.303	Gambusia_affinis
ENSSPUG00000003872	-	85	65.101	ENSGACG00000002048	rnpc3	95	52.834	Gasterosteus_aculeatus
ENSSPUG00000003872	-	93	74.747	ENSGAGG00000008438	RNPC3	95	74.747	Gopherus_agassizii
ENSSPUG00000003872	-	92	56.994	ENSGGOG00000026201	-	94	56.757	Gorilla_gorilla
ENSSPUG00000003872	-	74	66.667	ENSHBUG00000015966	rnpc3	81	66.667	Haplochromis_burtoni
ENSSPUG00000003872	-	93	66.000	ENSHGLG00000001708	RNPC3	96	65.800	Heterocephalus_glaber_female
ENSSPUG00000003872	-	93	66.000	ENSHGLG00100003005	RNPC3	96	65.800	Heterocephalus_glaber_male
ENSSPUG00000003872	-	92	52.218	ENSHCOG00000017135	rnpc3	98	51.619	Hippocampus_comes
ENSSPUG00000003872	-	92	65.323	ENSSTOG00000025020	RNPC3	96	65.000	Ictidomys_tridecemlineatus
ENSSPUG00000003872	-	92	64.706	ENSJJAG00000010203	Rnpc3	97	64.271	Jaculus_jaculus
ENSSPUG00000003872	-	92	50.615	ENSKMAG00000017358	rnpc3	97	46.032	Kryptolebias_marmoratus
ENSSPUG00000003872	-	92	62.857	ENSLACG00000005720	RNPC3	90	62.857	Latimeria_chalumnae
ENSSPUG00000003872	-	92	57.927	ENSLOCG00000007986	rnpc3	97	57.724	Lepisosteus_oculatus
ENSSPUG00000003872	-	92	64.315	ENSLAFG00000032342	RNPC3	96	64.000	Loxodonta_africana
ENSSPUG00000003872	-	93	65.531	ENSMFAG00000002004	RNPC3	96	65.531	Macaca_fascicularis
ENSSPUG00000003872	-	93	50.719	ENSMFAG00000002917	-	95	50.719	Macaca_fascicularis
ENSSPUG00000003872	-	93	65.331	ENSMMUG00000018039	RNPC3	96	65.331	Macaca_mulatta
ENSSPUG00000003872	-	93	61.723	ENSMNEG00000033950	RNPC3	96	61.723	Macaca_nemestrina
ENSSPUG00000003872	-	72	55.297	ENSMNEG00000029209	-	56	56.735	Macaca_nemestrina
ENSSPUG00000003872	-	93	65.731	ENSMLEG00000033628	RNPC3	96	65.731	Mandrillus_leucophaeus
ENSSPUG00000003872	-	93	51.215	ENSMLEG00000034644	-	96	52.024	Mandrillus_leucophaeus
ENSSPUG00000003872	-	92	50.605	ENSMAMG00000007496	rnpc3	97	50.605	Mastacembelus_armatus
ENSSPUG00000003872	-	90	52.121	ENSMZEG00005020233	rnpc3	96	52.121	Maylandia_zebra
ENSSPUG00000003872	-	84	73.128	ENSMGAG00000006381	RNPC3	99	73.128	Meleagris_gallopavo
ENSSPUG00000003872	-	93	65.060	ENSMAUG00000001358	Rnpc3	96	64.859	Mesocricetus_auratus
ENSSPUG00000003872	-	93	65.805	ENSMICG00000029591	RNPC3	96	65.805	Microcebus_murinus
ENSSPUG00000003872	-	93	65.531	ENSMOCG00000013423	Rnpc3	96	64.930	Microtus_ochrogaster
ENSSPUG00000003872	-	91	50.526	ENSMMOG00000005309	rnpc3	96	48.842	Mola_mola
ENSSPUG00000003872	-	92	70.492	ENSMODG00000002946	RNPC3	95	69.057	Monodelphis_domestica
ENSSPUG00000003872	-	93	50.898	ENSMALG00000015471	rnpc3	98	47.582	Monopterus_albus
ENSSPUG00000003872	-	93	64.529	MGP_CAROLIEiJ_G0025555	Rnpc3	98	64.329	Mus_caroli
ENSSPUG00000003872	-	93	64.729	ENSMUSG00000027981	Rnpc3	99	64.224	Mus_musculus
ENSSPUG00000003872	-	93	64.128	MGP_PahariEiJ_G0027001	Rnpc3	98	64.128	Mus_pahari
ENSSPUG00000003872	-	93	64.729	MGP_SPRETEiJ_G0026505	Rnpc3	98	64.329	Mus_spretus
ENSSPUG00000003872	-	94	66.800	ENSMPUG00000007349	RNPC3	96	66.934	Mustela_putorius_furo
ENSSPUG00000003872	-	93	65.200	ENSMLUG00000028743	RNPC3	96	65.200	Myotis_lucifugus
ENSSPUG00000003872	-	93	64.600	ENSNGAG00000010939	Rnpc3	97	64.600	Nannospalax_galili
ENSSPUG00000003872	-	92	53.320	ENSNBRG00000012196	rnpc3	93	53.320	Neolamprologus_brichardi
ENSSPUG00000003872	-	93	66.132	ENSNLEG00000012013	RNPC3	96	66.132	Nomascus_leucogenys
ENSSPUG00000003872	-	94	64.800	ENSODEG00000007612	RNPC3	96	64.930	Octodon_degus
ENSSPUG00000003872	-	92	52.834	ENSONIG00000004770	rnpc3	99	53.388	Oreochromis_niloticus
ENSSPUG00000003872	-	87	67.811	ENSOANG00000008220	RNPC3	99	68.240	Ornithorhynchus_anatinus
ENSSPUG00000003872	-	92	64.516	ENSOCUG00000004016	RNPC3	96	64.000	Oryctolagus_cuniculus
ENSSPUG00000003872	-	92	52.784	ENSORLG00000005694	rnpc3	97	52.784	Oryzias_latipes
ENSSPUG00000003872	-	92	52.784	ENSORLG00020005513	rnpc3	97	52.784	Oryzias_latipes_hni
ENSSPUG00000003872	-	92	52.577	ENSORLG00015002179	rnpc3	97	52.577	Oryzias_latipes_hsok
ENSSPUG00000003872	-	93	65.737	ENSOGAG00000026182	RNPC3	96	65.538	Otolemur_garnettii
ENSSPUG00000003872	-	93	65.209	ENSOARG00000018719	RNPC3	96	65.209	Ovis_aries
ENSSPUG00000003872	-	92	57.411	ENSPPAG00000030278	-	98	56.762	Pan_paniscus
ENSSPUG00000003872	-	93	65.669	ENSPPAG00000037459	RNPC3	96	65.669	Pan_paniscus
ENSSPUG00000003872	-	93	65.800	ENSPPRG00000020246	RNPC3	96	65.800	Panthera_pardus
ENSSPUG00000003872	-	93	65.800	ENSPTIG00000009887	RNPC3	98	65.800	Panthera_tigris_altaica
ENSSPUG00000003872	-	93	55.397	ENSPTRG00000044227	-	98	55.714	Pan_troglodytes
ENSSPUG00000003872	-	93	65.600	ENSPTRG00000033902	RNPC3	96	65.600	Pan_troglodytes
ENSSPUG00000003872	-	93	66.265	ENSPANG00000012137	RNPC3	96	66.265	Papio_anubis
ENSSPUG00000003872	-	90	54.098	ENSPKIG00000008828	rnpc3	95	54.397	Paramormyrops_kingsleyae
ENSSPUG00000003872	-	59	72.477	ENSPSIG00000007396	RNPC3	99	72.783	Pelodiscus_sinensis
ENSSPUG00000003872	-	91	47.705	ENSPMGG00000011742	rnpc3	95	48.566	Periophthalmus_magnuspinnatus
ENSSPUG00000003872	-	85	63.755	ENSPEMG00000020112	Rnpc3	100	64.018	Peromyscus_maniculatus_bairdii
ENSSPUG00000003872	-	71	58.861	ENSPMAG00000003778	rnpc3	87	46.269	Petromyzon_marinus
ENSSPUG00000003872	-	92	69.467	ENSPCIG00000004415	-	95	69.262	Phascolarctos_cinereus
ENSSPUG00000003872	-	92	52.113	ENSPFOG00000009895	rnpc3	96	52.314	Poecilia_formosa
ENSSPUG00000003872	-	92	52.515	ENSPLAG00000012023	rnpc3	96	52.515	Poecilia_latipinna
ENSSPUG00000003872	-	92	52.515	ENSPMEG00000003663	rnpc3	96	52.515	Poecilia_mexicana
ENSSPUG00000003872	-	92	52.314	ENSPREG00000010206	rnpc3	97	52.314	Poecilia_reticulata
ENSSPUG00000003872	-	77	59.091	ENSPPYG00000001102	RNPC3	95	59.091	Pongo_abelii
ENSSPUG00000003872	-	90	53.782	ENSPNYG00000020603	rnpc3	95	53.782	Pundamilia_nyererei
ENSSPUG00000003872	-	92	65.657	ENSRNOG00000017310	Rnpc3	96	65.130	Rattus_norvegicus
ENSSPUG00000003872	-	93	60.600	ENSRBIG00000043897	RNPC3	96	60.600	Rhinopithecus_bieti
ENSSPUG00000003872	-	93	65.731	ENSRROG00000032334	RNPC3	96	65.731	Rhinopithecus_roxellana
ENSSPUG00000003872	-	93	65.731	ENSSBOG00000024473	RNPC3	96	65.531	Saimiri_boliviensis_boliviensis
ENSSPUG00000003872	-	92	68.966	ENSSHAG00000011859	RNPC3	95	68.154	Sarcophilus_harrisii
ENSSPUG00000003872	-	92	55.510	ENSSFOG00015013055	rnpc3	99	55.306	Scleropages_formosus
ENSSPUG00000003872	-	92	50.493	ENSSMAG00000020346	rnpc3	97	50.690	Scophthalmus_maximus
ENSSPUG00000003872	-	92	51.004	ENSSDUG00000006600	rnpc3	97	51.205	Seriola_dumerili
ENSSPUG00000003872	-	92	51.004	ENSSLDG00000007979	rnpc3	97	51.205	Seriola_lalandi_dorsalis
ENSSPUG00000003872	-	93	65.400	ENSSSCG00000037254	RNPC3	96	65.000	Sus_scrofa
ENSSPUG00000003872	-	84	72.707	ENSTGUG00000004795	-	99	69.799	Taeniopygia_guttata
ENSSPUG00000003872	-	92	52.041	ENSTNIG00000018963	rnpc3	97	52.041	Tetraodon_nigroviridis
ENSSPUG00000003872	-	93	66.800	ENSUMAG00000007775	RNPC3	98	66.800	Ursus_maritimus
ENSSPUG00000003872	-	93	65.800	ENSVVUG00000000331	RNPC3	96	65.800	Vulpes_vulpes
ENSSPUG00000003872	-	93	49.290	ENSXETG00000025027	rnpc3	97	45.873	Xenopus_tropicalis
ENSSPUG00000003872	-	92	49.194	ENSXCOG00000005013	rnpc3	97	51.411	Xiphophorus_couchianus
ENSSPUG00000003872	-	92	50.301	ENSXMAG00000006495	rnpc3	97	51.703	Xiphophorus_maculatus