EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSPUG00000004087 (Gene tree)
Gene ID: -
Gene Symbol: NAF1
Alias: -
Full Name: nuclear assembly factor 1 ribonucleoprotein
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Plus strand
Length: 72715 bases
Position: chrQEPC01013194.1:2751026-2823740
Accession: 25126
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000005392	Gar1	PF04410.14	2.7e-42	1	1
ENSSPUP00000005454	Gar1	PF04410.14	5.8e-42	1	1
ENSSPUP00000005442	Gar1	PF04410.14	9.3e-42	1	1
ENSSPUP00000005429	Gar1	PF04410.14	1e-41	1	1
ENSSPUP00000005469	Gar1	PF04410.14	1.1e-41	1	1
ENSSPUP00000005461	Gar1	PF04410.14	4.6e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000005768	NAF1-202	1137	-	ENSSPUP00000005429	378 (aa)	-	-
ENSSPUT00000005781	NAF1-203	1095	-	ENSSPUP00000005442	364 (aa)	-	-
ENSSPUT00000005813	NAF1-206	1101	-	ENSSPUP00000005469	366 (aa)	-	-
ENSSPUT00000005796	NAF1-204	1002	-	ENSSPUP00000005454	333 (aa)	-	-
ENSSPUT00000005805	NAF1-205	1038	-	ENSSPUP00000005461	345 (aa)	-	-
ENSSPUT00000005727	NAF1-201	967	-	ENSSPUP00000005392	288 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000004087's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000004087's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000004087	NAF1	98	58.209	ENSG00000145414	NAF1	95	77.500	Homo_sapiens
ENSSPUG00000004087	NAF1	87	62.245	ENSAMEG00000014688	NAF1	59	62.500	Ailuropoda_melanoleuca
ENSSPUG00000004087	NAF1	58	57.229	ENSAOCG00000003518	-	62	38.095	Amphiprion_ocellaris
ENSSPUG00000004087	NAF1	91	56.090	ENSAPLG00000003210	NAF1	83	57.237	Anas_platyrhynchos
ENSSPUG00000004087	NAF1	98	58.209	ENSANAG00000025253	NAF1	93	77.500	Aotus_nancymaae
ENSSPUG00000004087	NAF1	68	73.333	ENSBTAG00000034700	NAF1	53	74.211	Bos_taurus
ENSSPUG00000004087	NAF1	98	54.261	ENSCJAG00000012406	NAF1	95	75.000	Callithrix_jacchus
ENSSPUG00000004087	NAF1	68	64.912	ENSCAFG00000029679	NAF1	89	60.289	Canis_familiaris
ENSSPUG00000004087	NAF1	84	61.165	ENSCAFG00020005334	NAF1	62	61.386	Canis_lupus_dingo
ENSSPUG00000004087	NAF1	68	72.821	ENSCHIG00000018430	NAF1	51	73.684	Capra_hircus
ENSSPUG00000004087	NAF1	68	73.333	ENSTSYG00000005946	NAF1	84	80.556	Carlito_syrichta
ENSSPUG00000004087	NAF1	68	71.282	ENSCAPG00000017838	NAF1	66	63.636	Cavia_aperea
ENSSPUG00000004087	NAF1	68	71.795	ENSCPOG00000010331	NAF1	50	64.032	Cavia_porcellus
ENSSPUG00000004087	NAF1	98	58.507	ENSCCAG00000030023	NAF1	95	77.500	Cebus_capucinus
ENSSPUG00000004087	NAF1	98	58.383	ENSCATG00000022663	NAF1	95	77.500	Cercocebus_atys
ENSSPUG00000004087	NAF1	99	56.958	ENSCLAG00000017209	NAF1	54	60.236	Chinchilla_lanigera
ENSSPUG00000004087	NAF1	87	59.661	ENSCHOG00000011393	NAF1	50	63.281	Choloepus_hoffmanni
ENSSPUG00000004087	NAF1	97	66.667	ENSCPBG00000003379	NAF1	53	81.600	Chrysemys_picta_bellii
ENSSPUG00000004087	NAF1	88	60.667	ENSCANG00000039151	NAF1	95	77.500	Colobus_angolensis_palliatus
ENSSPUG00000004087	NAF1	98	58.006	ENSCGRG00001018484	Naf1	61	59.197	Cricetulus_griseus_chok1gshd
ENSSPUG00000004087	NAF1	68	74.112	ENSCGRG00000001742	Naf1	72	62.846	Cricetulus_griseus_crigri
ENSSPUG00000004087	NAF1	52	58.000	ENSCVAG00000003483	-	50	58.389	Cyprinodon_variegatus
ENSSPUG00000004087	NAF1	93	59.248	ENSDNOG00000031106	NAF1	51	64.453	Dasypus_novemcinctus
ENSSPUG00000004087	NAF1	98	57.229	ENSDORG00000011327	Naf1	61	59.866	Dipodomys_ordii
ENSSPUG00000004087	NAF1	88	60.067	ENSEASG00005022201	NAF1	57	60.000	Equus_asinus_asinus
ENSSPUG00000004087	NAF1	88	60.738	ENSECAG00000016738	NAF1	57	60.667	Equus_caballus
ENSSPUG00000004087	NAF1	67	70.466	ENSEEUG00000008335	-	63	71.053	Erinaceus_europaeus
ENSSPUG00000004087	NAF1	96	58.485	ENSFCAG00000031652	NAF1	59	61.873	Felis_catus
ENSSPUG00000004087	NAF1	91	57.282	ENSFALG00000011110	NAF1	61	58.054	Ficedula_albicollis
ENSSPUG00000004087	NAF1	68	71.795	ENSFDAG00000007497	NAF1	56	63.386	Fukomys_damarensis
ENSSPUG00000004087	NAF1	56	60.366	ENSFHEG00000015835	-	50	45.238	Fundulus_heteroclitus
ENSSPUG00000004087	NAF1	98	58.589	ENSGALG00000009496	NAF1	57	73.600	Gallus_gallus
ENSSPUG00000004087	NAF1	56	59.259	ENSGAFG00000017883	-	60	42.308	Gambusia_affinis
ENSSPUG00000004087	NAF1	98	58.859	ENSGGOG00000000894	NAF1	95	77.500	Gorilla_gorilla
ENSSPUG00000004087	NAF1	56	61.111	ENSHBUG00000002404	-	56	59.649	Haplochromis_burtoni
ENSSPUG00000004087	NAF1	68	70.256	ENSHGLG00000014899	NAF1	51	62.205	Heterocephalus_glaber_female
ENSSPUG00000004087	NAF1	68	70.256	ENSHGLG00100007507	NAF1	51	62.205	Heterocephalus_glaber_male
ENSSPUG00000004087	NAF1	55	57.595	ENSIPUG00000019009	naf1	53	41.196	Ictalurus_punctatus
ENSSPUG00000004087	NAF1	93	58.544	ENSSTOG00000023858	NAF1	57	59.801	Ictidomys_tridecemlineatus
ENSSPUG00000004087	NAF1	68	72.449	ENSJJAG00000012147	-	77	57.143	Jaculus_jaculus
ENSSPUG00000004087	NAF1	52	62.416	ENSLACG00000004353	-	58	56.085	Latimeria_chalumnae
ENSSPUG00000004087	NAF1	56	61.905	ENSLOCG00000007989	NAF1	62	53.516	Lepisosteus_oculatus
ENSSPUG00000004087	NAF1	68	69.744	ENSLAFG00000009193	-	60	70.526	Loxodonta_africana
ENSSPUG00000004087	NAF1	88	60.000	ENSMFAG00000040952	NAF1	95	77.500	Macaca_fascicularis
ENSSPUG00000004087	NAF1	88	60.000	ENSMMUG00000001717	NAF1	95	77.500	Macaca_mulatta
ENSSPUG00000004087	NAF1	88	60.000	ENSMNEG00000032677	NAF1	95	77.500	Macaca_nemestrina
ENSSPUG00000004087	NAF1	93	59.177	ENSMLEG00000035330	NAF1	95	77.500	Mandrillus_leucophaeus
ENSSPUG00000004087	NAF1	60	58.960	ENSMAMG00000003269	-	58	60.112	Mastacembelus_armatus
ENSSPUG00000004087	NAF1	85	43.816	ENSMZEG00005005830	-	50	50.935	Maylandia_zebra
ENSSPUG00000004087	NAF1	80	62.687	ENSMGAG00000002133	NAF1	79	64.173	Meleagris_gallopavo
ENSSPUG00000004087	NAF1	98	55.152	ENSMAUG00000013072	Naf1	65	59.000	Mesocricetus_auratus
ENSSPUG00000004087	NAF1	93	58.228	ENSMICG00000038661	NAF1	84	77.778	Microcebus_murinus
ENSSPUG00000004087	NAF1	93	56.646	ENSMOCG00000010360	Naf1	61	57.860	Microtus_ochrogaster
ENSSPUG00000004087	NAF1	67	71.134	MGP_CAROLIEiJ_G0031097	Naf1	50	59.000	Mus_caroli
ENSSPUG00000004087	NAF1	68	71.939	MGP_PahariEiJ_G0021563	-	51	62.302	Mus_pahari
ENSSPUG00000004087	NAF1	68	71.429	MGP_SPRETEiJ_G0032213	-	53	61.024	Mus_spretus
ENSSPUG00000004087	NAF1	89	59.801	ENSMPUG00000001861	NAF1	59	59.468	Mustela_putorius_furo
ENSSPUG00000004087	NAF1	68	69.192	ENSMLUG00000004627	NAF1	59	59.136	Myotis_lucifugus
ENSSPUG00000004087	NAF1	99	56.811	ENSNGAG00000023833	Naf1	62	58.609	Nannospalax_galili
ENSSPUG00000004087	NAF1	68	73.333	ENSNLEG00000006459	-	95	77.500	Nomascus_leucogenys
ENSSPUG00000004087	NAF1	68	71.282	ENSODEG00000006528	NAF1	56	63.529	Octodon_degus
ENSSPUG00000004087	NAF1	58	60.479	ENSONIG00000001826	-	52	58.333	Oreochromis_niloticus
ENSSPUG00000004087	NAF1	93	56.731	ENSOANG00000014157	-	65	60.769	Ornithorhynchus_anatinus
ENSSPUG00000004087	NAF1	68	70.918	ENSOCUG00000000485	NAF1	58	58.278	Oryctolagus_cuniculus
ENSSPUG00000004087	NAF1	93	39.117	ENSORLG00000002191	-	53	39.159	Oryzias_latipes
ENSSPUG00000004087	NAF1	93	38.006	ENSORLG00020013478	-	53	39.482	Oryzias_latipes_hni
ENSSPUG00000004087	NAF1	93	57.278	ENSOARG00000013716	NAF1	55	62.500	Ovis_aries
ENSSPUG00000004087	NAF1	98	58.383	ENSPPAG00000034674	NAF1	95	77.500	Pan_paniscus
ENSSPUG00000004087	NAF1	88	61.204	ENSPPRG00000003688	NAF1	59	61.204	Panthera_pardus
ENSSPUG00000004087	NAF1	88	61.204	ENSPTIG00000017246	NAF1	59	61.204	Panthera_tigris_altaica
ENSSPUG00000004087	NAF1	98	58.383	ENSPTRG00000016560	NAF1	95	77.500	Pan_troglodytes
ENSSPUG00000004087	NAF1	98	58.084	ENSPANG00000015574	NAF1	95	77.500	Papio_anubis
ENSSPUG00000004087	NAF1	93	66.038	ENSPSIG00000006545	NAF1	59	85.841	Pelodiscus_sinensis
ENSSPUG00000004087	NAF1	98	56.287	ENSPEMG00000014321	Naf1	73	58.194	Peromyscus_maniculatus_bairdii
ENSSPUG00000004087	NAF1	75	51.613	ENSPFOG00000010705	-	79	41.860	Poecilia_formosa
ENSSPUG00000004087	NAF1	61	57.955	ENSPLAG00000002200	-	63	42.089	Poecilia_latipinna
ENSSPUG00000004087	NAF1	61	56.818	ENSPREG00000022551	-	63	42.122	Poecilia_reticulata
ENSSPUG00000004087	NAF1	82	57.194	ENSPPYG00000029771	-	89	58.633	Pongo_abelii
ENSSPUG00000004087	NAF1	68	73.980	ENSPVAG00000016222	NAF1	57	61.538	Pteropus_vampyrus
ENSSPUG00000004087	NAF1	53	57.792	ENSPNYG00000021456	-	50	57.051	Pundamilia_nyererei
ENSSPUG00000004087	NAF1	99	57.605	ENSRNOG00000026403	Naf1	60	63.095	Rattus_norvegicus
ENSSPUG00000004087	NAF1	80	62.132	ENSRBIG00000030027	NAF1	95	77.500	Rhinopithecus_bieti
ENSSPUG00000004087	NAF1	98	58.084	ENSRROG00000040912	NAF1	95	77.500	Rhinopithecus_roxellana
ENSSPUG00000004087	NAF1	98	58.507	ENSSBOG00000002085	NAF1	95	77.500	Saimiri_boliviensis_boliviensis
ENSSPUG00000004087	NAF1	61	55.114	ENSSMAG00000015529	-	53	47.511	Scophthalmus_maximus
ENSSPUG00000004087	NAF1	68	65.306	ENSSARG00000006627	-	59	65.969	Sorex_araneus
ENSSPUG00000004087	NAF1	68	73.333	ENSSSCG00000008887	NAF1	54	62.646	Sus_scrofa
ENSSPUG00000004087	NAF1	64	71.351	ENSTGUG00000005798	NAF1	100	71.351	Taeniopygia_guttata
ENSSPUG00000004087	NAF1	98	60.269	ENSTTRG00000010106	NAF1	55	62.403	Tursiops_truncatus
ENSSPUG00000004087	NAF1	87	62.373	ENSUAMG00000017043	NAF1	59	61.667	Ursus_americanus
ENSSPUG00000004087	NAF1	87	62.034	ENSUMAG00000019748	NAF1	59	61.333	Ursus_maritimus
ENSSPUG00000004087	NAF1	68	71.795	ENSVPAG00000007182	-	75	72.632	Vicugna_pacos
ENSSPUG00000004087	NAF1	68	74.112	ENSVVUG00000022303	NAF1	78	61.386	Vulpes_vulpes
ENSSPUG00000004087	NAF1	52	55.629	ENSXCOG00000013058	-	50	55.629	Xiphophorus_couchianus