EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSPUG00000004366 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sphenodon_punctatus
Status: putative
Strand: Minus strand
Length: 83904 bases
Position: chrQEPC01008654.1:32688-116591
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSPUP00000005693	zf-C2H2	PF00096.26	1.4e-55	1	8
ENSSPUP00000005693	zf-C2H2	PF00096.26	1.4e-55	2	8
ENSSPUP00000005693	zf-C2H2	PF00096.26	1.4e-55	3	8
ENSSPUP00000005693	zf-C2H2	PF00096.26	1.4e-55	4	8
ENSSPUP00000005693	zf-C2H2	PF00096.26	1.4e-55	5	8
ENSSPUP00000005693	zf-C2H2	PF00096.26	1.4e-55	6	8
ENSSPUP00000005693	zf-C2H2	PF00096.26	1.4e-55	7	8
ENSSPUP00000005693	zf-C2H2	PF00096.26	1.4e-55	8	8
ENSSPUP00000005660	zf-C2H2	PF00096.26	9.3e-49	1	8
ENSSPUP00000005660	zf-C2H2	PF00096.26	9.3e-49	2	8
ENSSPUP00000005660	zf-C2H2	PF00096.26	9.3e-49	3	8
ENSSPUP00000005660	zf-C2H2	PF00096.26	9.3e-49	4	8
ENSSPUP00000005660	zf-C2H2	PF00096.26	9.3e-49	5	8
ENSSPUP00000005660	zf-C2H2	PF00096.26	9.3e-49	6	8
ENSSPUP00000005660	zf-C2H2	PF00096.26	9.3e-49	7	8
ENSSPUP00000005660	zf-C2H2	PF00096.26	9.3e-49	8	8
ENSSPUP00000005660	zf-met	PF12874.7	2.2e-09	1	2
ENSSPUP00000005660	zf-met	PF12874.7	2.2e-09	2	2
ENSSPUP00000005693	zf-met	PF12874.7	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSPUT00000006019	-	1335	-	ENSSPUP00000005660	444 (aa)	-	-
ENSSPUT00000006054	-	1308	-	ENSSPUP00000005693	435 (aa)	-	-

Gene Model

Click here to download ENSSPUG00000004366's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSPUG00000004366's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSPUG00000004366	-	56	40.299	ENSSPUG00000005427	-	54	40.458
ENSSPUG00000004366	-	95	36.111	ENSSPUG00000001341	ZBTB44	61	36.111
ENSSPUG00000004366	-	68	44.248	ENSSPUG00000004548	WT1	56	44.248
ENSSPUG00000004366	-	59	45.794	ENSSPUG00000000709	ZNF236	63	45.217
ENSSPUG00000004366	-	96	51.867	ENSSPUG00000007089	-	78	53.211
ENSSPUG00000004366	-	56	38.938	ENSSPUG00000005307	GTF3A	84	34.911
ENSSPUG00000004366	-	56	64.835	ENSSPUG00000000229	-	86	64.835
ENSSPUG00000004366	-	61	51.724	ENSSPUG00000009941	PRDM5	97	42.149
ENSSPUG00000004366	-	58	41.304	ENSSPUG00000018637	SCRT2	54	41.481
ENSSPUG00000004366	-	79	63.636	ENSSPUG00000000136	-	99	63.636
ENSSPUG00000004366	-	71	66.942	ENSSPUG00000010059	-	93	66.942
ENSSPUG00000004366	-	63	56.432	ENSSPUG00000007147	-	93	58.854
ENSSPUG00000004366	-	78	72.477	ENSSPUG00000007092	-	62	72.477
ENSSPUG00000004366	-	56	49.153	ENSSPUG00000008417	ZNF770	64	49.153
ENSSPUG00000004366	-	57	34.641	ENSSPUG00000010618	MAZ	67	34.132
ENSSPUG00000004366	-	56	38.028	ENSSPUG00000018057	SNAI1	61	37.037
ENSSPUG00000004366	-	98	68.220	ENSSPUG00000009898	-	99	68.220
ENSSPUG00000004366	-	96	62.269	ENSSPUG00000009764	-	79	62.269
ENSSPUG00000004366	-	56	41.558	ENSSPUG00000015952	-	53	40.000
ENSSPUG00000004366	-	56	39.171	ENSSPUG00000011853	ZBTB48	53	40.541
ENSSPUG00000004366	-	53	73.391	ENSSPUG00000010016	-	93	73.391
ENSSPUG00000004366	-	51	39.744	ENSSPUG00000001720	OVOL2	63	42.188
ENSSPUG00000004366	-	58	59.412	ENSSPUG00000007064	-	96	59.412
ENSSPUG00000004366	-	60	71.008	ENSSPUG00000018867	-	97	71.008

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSPUG00000004366	-	80	68.605	ENSACAG00000008664	-	78	68.605	Anolis_carolinensis
ENSSPUG00000004366	-	64	51.852	ENSACAG00000024956	-	81	51.852	Anolis_carolinensis
ENSSPUG00000004366	-	60	50.515	ENSACAG00000024898	-	98	49.733	Anolis_carolinensis
ENSSPUG00000004366	-	62	57.522	ENSAMXG00000042784	-	90	57.522	Astyanax_mexicanus
ENSSPUG00000004366	-	58	59.091	ENSAMXG00000034847	-	84	59.091	Astyanax_mexicanus
ENSSPUG00000004366	-	61	59.563	ENSAMXG00000036233	-	79	62.428	Astyanax_mexicanus
ENSSPUG00000004366	-	60	59.538	ENSAMXG00000025452	-	96	59.538	Astyanax_mexicanus
ENSSPUG00000004366	-	67	48.447	ENSAMXG00000035246	-	73	48.447	Astyanax_mexicanus
ENSSPUG00000004366	-	61	56.223	ENSAMXG00000038536	-	90	56.223	Astyanax_mexicanus
ENSSPUG00000004366	-	58	55.794	ENSAMXG00000042746	-	90	55.794	Astyanax_mexicanus
ENSSPUG00000004366	-	70	55.785	ENSAMXG00000010805	-	99	55.785	Astyanax_mexicanus
ENSSPUG00000004366	-	56	57.143	ENSAMXG00000032841	-	74	57.143	Astyanax_mexicanus
ENSSPUG00000004366	-	60	61.570	ENSAMXG00000038636	-	98	61.570	Astyanax_mexicanus
ENSSPUG00000004366	-	68	57.848	ENSAMXG00000034344	-	86	57.848	Astyanax_mexicanus
ENSSPUG00000004366	-	58	51.825	ENSAMXG00000038325	-	95	54.299	Astyanax_mexicanus
ENSSPUG00000004366	-	58	43.600	ENSBTAG00000038322	-	76	44.292	Bos_taurus
ENSSPUG00000004366	-	67	58.861	ENSCPBG00000026433	-	70	58.861	Chrysemys_picta_bellii
ENSSPUG00000004366	-	61	50.840	ENSCPBG00000001526	-	80	53.960	Chrysemys_picta_bellii
ENSSPUG00000004366	-	72	48.148	ENSCPBG00000008580	-	94	40.484	Chrysemys_picta_bellii
ENSSPUG00000004366	-	59	42.188	ENSCPBG00000013652	-	66	42.188	Chrysemys_picta_bellii
ENSSPUG00000004366	-	58	48.828	ENSCSAVG00000010960	-	100	52.000	Ciona_savignyi
ENSSPUG00000004366	-	59	44.141	ENSDNOG00000047495	-	79	44.141	Dasypus_novemcinctus
ENSSPUG00000004366	-	60	51.452	ENSEBUG00000008306	-	79	51.452	Eptatretus_burgeri
ENSSPUG00000004366	-	60	53.093	ENSEBUG00000011694	-	95	53.093	Eptatretus_burgeri
ENSSPUG00000004366	-	75	45.652	ENSEBUG00000005264	-	90	45.652	Eptatretus_burgeri
ENSSPUG00000004366	-	61	48.780	ENSEBUG00000002075	-	78	50.000	Eptatretus_burgeri
ENSSPUG00000004366	-	75	55.357	ENSEBUG00000012919	-	88	55.357	Eptatretus_burgeri
ENSSPUG00000004366	-	68	40.773	ENSEBUG00000014717	-	77	40.773	Eptatretus_burgeri
ENSSPUG00000004366	-	82	50.000	ENSEBUG00000011435	-	99	50.000	Eptatretus_burgeri
ENSSPUG00000004366	-	56	51.271	ENSEBUG00000015837	-	78	51.271	Eptatretus_burgeri
ENSSPUG00000004366	-	70	42.222	ENSEBUG00000013875	-	92	42.222	Eptatretus_burgeri
ENSSPUG00000004366	-	56	43.802	ENSEASG00005004469	-	69	43.802	Equus_asinus_asinus
ENSSPUG00000004366	-	82	47.982	ENSGMOG00000018506	-	100	47.982	Gadus_morhua
ENSSPUG00000004366	-	70	46.473	ENSGALG00000049609	-	68	46.473	Gallus_gallus
ENSSPUG00000004366	-	60	59.751	ENSGALG00000055127	-	73	59.751	Gallus_gallus
ENSSPUG00000004366	-	58	55.510	ENSGALG00000046336	-	99	55.838	Gallus_gallus
ENSSPUG00000004366	-	61	64.615	ENSGALG00000053507	-	80	59.031	Gallus_gallus
ENSSPUG00000004366	-	62	56.017	ENSGALG00000054325	-	98	56.017	Gallus_gallus
ENSSPUG00000004366	-	58	57.438	ENSGALG00000044069	-	55	57.438	Gallus_gallus
ENSSPUG00000004366	-	58	51.376	ENSGACG00000006283	-	95	48.872	Gasterosteus_aculeatus
ENSSPUG00000004366	-	62	51.802	ENSGAGG00000011366	-	99	53.719	Gopherus_agassizii
ENSSPUG00000004366	-	81	52.451	ENSGAGG00000018885	-	88	52.451	Gopherus_agassizii
ENSSPUG00000004366	-	65	57.229	ENSGAGG00000011399	-	94	57.229	Gopherus_agassizii
ENSSPUG00000004366	-	61	47.170	ENSHCOG00000018201	-	81	47.170	Hippocampus_comes
ENSSPUG00000004366	-	56	56.164	ENSIPUG00000021515	-	99	56.164	Ictalurus_punctatus
ENSSPUG00000004366	-	58	47.368	ENSIPUG00000012109	ZN12	52	47.368	Ictalurus_punctatus
ENSSPUG00000004366	-	71	62.397	ENSIPUG00000015468	-	88	57.872	Ictalurus_punctatus
ENSSPUG00000004366	-	58	50.235	ENSJJAG00000023633	Zfp672	89	51.402	Jaculus_jaculus
ENSSPUG00000004366	-	61	42.353	ENSLACG00000009005	-	99	42.353	Latimeria_chalumnae
ENSSPUG00000004366	-	61	53.812	ENSLACG00000022211	-	82	53.812	Latimeria_chalumnae
ENSSPUG00000004366	-	58	40.417	ENSLACG00000005264	-	98	40.417	Latimeria_chalumnae
ENSSPUG00000004366	-	56	45.205	ENSLOCG00000017864	-	99	45.205	Lepisosteus_oculatus
ENSSPUG00000004366	-	59	40.588	ENSLOCG00000014210	-	50	43.262	Lepisosteus_oculatus
ENSSPUG00000004366	-	71	61.538	ENSMGAG00000013362	-	100	63.590	Meleagris_gallopavo
ENSSPUG00000004366	-	59	51.643	ENSMAUG00000009945	Zfp672	90	51.643	Mesocricetus_auratus
ENSSPUG00000004366	-	58	43.571	ENSMMOG00000003923	-	82	45.455	Mola_mola
ENSSPUG00000004366	-	61	48.496	ENSMODG00000001880	-	79	48.496	Monodelphis_domestica
ENSSPUG00000004366	-	58	51.174	MGP_CAROLIEiJ_G0016391	Zfp672	89	51.174	Mus_caroli
ENSSPUG00000004366	-	66	50.500	MGP_CAROLIEiJ_G0030502	-	69	50.500	Mus_caroli
ENSSPUG00000004366	-	85	47.934	ENSMUSG00000030823	9130019O22Rik	87	47.934	Mus_musculus
ENSSPUG00000004366	-	53	51.220	ENSMUSG00000049755	Zfp672	89	50.704	Mus_musculus
ENSSPUG00000004366	-	58	50.704	MGP_SPRETEiJ_G0017233	Zfp672	89	50.704	Mus_spretus
ENSSPUG00000004366	-	59	46.457	MGP_SPRETEiJ_G0031613	-	84	49.474	Mus_spretus
ENSSPUG00000004366	-	67	53.810	ENSNGAG00000015777	Zim1	65	56.545	Nannospalax_galili
ENSSPUG00000004366	-	58	47.107	ENSNBRG00000007276	-	50	47.154	Neolamprologus_brichardi
ENSSPUG00000004366	-	58	44.915	ENSNBRG00000000708	-	89	45.223	Neolamprologus_brichardi
ENSSPUG00000004366	-	58	49.541	ENSORLG00020001922	-	77	47.368	Oryzias_latipes_hni
ENSSPUG00000004366	-	60	48.624	ENSOMEG00000001598	-	65	48.624	Oryzias_melastigma
ENSSPUG00000004366	-	67	49.020	ENSPSIG00000004502	-	72	49.367	Pelodiscus_sinensis
ENSSPUG00000004366	-	60	55.602	ENSPSIG00000012650	-	78	53.982	Pelodiscus_sinensis
ENSSPUG00000004366	-	56	51.075	ENSPSIG00000000672	-	84	51.075	Pelodiscus_sinensis
ENSSPUG00000004366	-	59	45.385	ENSPSIG00000006586	-	99	45.385	Pelodiscus_sinensis
ENSSPUG00000004366	-	67	56.757	ENSPSIG00000010328	-	82	56.757	Pelodiscus_sinensis
ENSSPUG00000004366	-	83	54.959	ENSPSIG00000010248	-	93	54.959	Pelodiscus_sinensis
ENSSPUG00000004366	-	67	55.602	ENSPSIG00000015459	-	76	55.602	Pelodiscus_sinensis
ENSSPUG00000004366	-	74	51.948	ENSPSIG00000005672	-	99	51.948	Pelodiscus_sinensis
ENSSPUG00000004366	-	67	57.339	ENSPSIG00000013021	-	82	57.339	Pelodiscus_sinensis
ENSSPUG00000004366	-	59	60.317	ENSPSIG00000016380	-	74	60.317	Pelodiscus_sinensis
ENSSPUG00000004366	-	71	53.023	ENSPSIG00000003152	-	94	53.023	Pelodiscus_sinensis
ENSSPUG00000004366	-	67	53.712	ENSPSIG00000005603	-	81	53.712	Pelodiscus_sinensis
ENSSPUG00000004366	-	58	56.081	ENSPSIG00000006790	-	88	61.446	Pelodiscus_sinensis
ENSSPUG00000004366	-	66	47.449	ENSPREG00000002642	-	96	47.449	Poecilia_reticulata
ENSSPUG00000004366	-	58	50.413	ENSPNYG00000015486	-	50	50.413	Pundamilia_nyererei
ENSSPUG00000004366	-	56	55.102	ENSPNAG00000018395	-	59	55.102	Pygocentrus_nattereri
ENSSPUG00000004366	-	59	58.163	ENSPNAG00000000088	-	92	58.163	Pygocentrus_nattereri
ENSSPUG00000004366	-	58	51.174	ENSRNOG00000002713	Zfp672	88	52.174	Rattus_norvegicus
ENSSPUG00000004366	-	66	44.672	ENSSHAG00000018106	-	78	44.672	Sarcophilus_harrisii
ENSSPUG00000004366	-	60	53.913	ENSSFOG00015019818	-	73	53.299	Scleropages_formosus
ENSSPUG00000004366	-	53	45.185	ENSSMAG00000004252	-	87	45.185	Scophthalmus_maximus
ENSSPUG00000004366	-	67	48.624	ENSSPAG00000021653	-	96	48.624	Stegastes_partitus
ENSSPUG00000004366	-	56	59.259	ENSTGUG00000018351	-	99	59.259	Taeniopygia_guttata
ENSSPUG00000004366	-	61	60.504	ENSTGUG00000015210	-	100	60.504	Taeniopygia_guttata
ENSSPUG00000004366	-	59	42.857	ENSTRUG00000022066	-	88	43.750	Takifugu_rubripes
ENSSPUG00000004366	-	56	50.622	ENSXETG00000031192	-	100	50.622	Xenopus_tropicalis
ENSSPUG00000004366	-	58	49.770	ENSXCOG00000006553	-	85	51.807	Xiphophorus_couchianus
ENSSPUG00000004366	-	56	46.667	ENSXMAG00000026680	-	82	44.737	Xiphophorus_maculatus